| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931556
Identifier: 220931556
GI number: 220931556
Start: 769237
End: 769722
Strand: Reverse
Name: 220931556
Synonym: Hore_07120
Alternate gene names: NA
Gene position: 769722-769237 (Counterclockwise)
Preceding gene: 220931592
Following gene: 220931537
Centisome position: 29.86
GC content: 38.89
Gene sequence:
>486_bases ATGAAGAGAAGGACAGCTCTTACTCTCATGGTAGCTGTATCTCTTTTACTAATCATTACGGTCTCAATCCAGGCAGGTGG AAAATCTGGACAAGTAGTCAGGGTAACATCAACAGTTAAAGCCTATCAGGAATTAACTGAAATTAGACCGGTTTCTGTTA ACCTTGAGCAGGTCAAAGCACAACTTAAAAACGGCAACCCGGTTATCATCAATAATGTTGGACAAACCAGAATAACAAGT AATGTAAACTGGAATCTAAACTTAAGTATTGTAGAAAAGTCAGGATATGATGTCTATGTAAAACCATCGGGAATATCTTC TTTCAGCAGTCAATGGATTAAGGTAAATTCTAATGACAACCTGCTTAAAGGACACAGAGGCTCTTACCTGGTAAGCTGGG ATGTAATGATTGTGCCAGTAGCAAATCATTACCCGCACACCAATCAATTGCTACTTCAGATATCTCTTTCACCTGTGACA ACTTGA
Upstream 100 bases:
>100_bases AAATGGTAAACCCATCGAAAGGTGGGGACACAAAGTCACGGGCCTGTAGCCGGTTATTTTTAACCGGTATGGCAGCCGGA CTGCCGAAGGAGGTGTCATT
Downstream 100 bases:
>100_bases CCACGTAATACTTTGATTAAGAGGGGTTTAAATTAACTTCCTCTTTTTTTTTGTCTTCTGTCATATCCCACTTTAAACAC TTAGAACCCCATCTGGCAAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 161; Mature: 161
Protein sequence:
>161_residues MKRRTALTLMVAVSLLLIITVSIQAGGKSGQVVRVTSTVKAYQELTEIRPVSVNLEQVKAQLKNGNPVIINNVGQTRITS NVNWNLNLSIVEKSGYDVYVKPSGISSFSSQWIKVNSNDNLLKGHRGSYLVSWDVMIVPVANHYPHTNQLLLQISLSPVT T
Sequences:
>Translated_161_residues MKRRTALTLMVAVSLLLIITVSIQAGGKSGQVVRVTSTVKAYQELTEIRPVSVNLEQVKAQLKNGNPVIINNVGQTRITS NVNWNLNLSIVEKSGYDVYVKPSGISSFSSQWIKVNSNDNLLKGHRGSYLVSWDVMIVPVANHYPHTNQLLLQISLSPVT T >Mature_161_residues MKRRTALTLMVAVSLLLIITVSIQAGGKSGQVVRVTSTVKAYQELTEIRPVSVNLEQVKAQLKNGNPVIINNVGQTRITS NVNWNLNLSIVEKSGYDVYVKPSGISSFSSQWIKVNSNDNLLKGHRGSYLVSWDVMIVPVANHYPHTNQLLLQISLSPVT T
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17713; Mature: 17713
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRRTALTLMVAVSLLLIITVSIQAGGKSGQVVRVTSTVKAYQELTEIRPVSVNLEQVKA CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCEEECHHHHHH QLKNGNPVIINNVGQTRITSNVNWNLNLSIVEKSGYDVYVKPSGISSFSSQWIKVNSNDN HHCCCCEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCC LLKGHRGSYLVSWDVMIVPVANHYPHTNQLLLQISLSPVTT EEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC >Mature Secondary Structure MKRRTALTLMVAVSLLLIITVSIQAGGKSGQVVRVTSTVKAYQELTEIRPVSVNLEQVKA CCCHHHHHHHHHHHHHHHEEEEEECCCCCCCEEEEHHHHHHHHHHHHCCCEEECHHHHHH QLKNGNPVIINNVGQTRITSNVNWNLNLSIVEKSGYDVYVKPSGISSFSSQWIKVNSNDN HHCCCCEEEEECCCCEEEECCCCEEEEEEEEECCCCEEEEECCCCCCCCCCEEEECCCCC LLKGHRGSYLVSWDVMIVPVANHYPHTNQLLLQISLSPVTT EEECCCCCEEEEEEEEEEEECCCCCCCCEEEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA