| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931553
Identifier: 220931553
GI number: 220931553
Start: 766162
End: 767154
Strand: Direct
Name: 220931553
Synonym: Hore_07090
Alternate gene names: NA
Gene position: 766162-767154 (Clockwise)
Preceding gene: 220931552
Following gene: 220931554
Centisome position: 29.72
GC content: 35.55
Gene sequence:
>993_bases ATGGGAAGTAAGATTGGTGTTCCCCGGGCTCTTTTATATCATTATTATTACCCGGCCTGGGAAGAGTTTTTTAATAGACT GGGTTTTGAAATTGTTTTATCCAAACCTACCAATAAAGAAATTTTAAATAGGGGAGTAAAACTGGCAGTTGATGACCTCT GCCTTCCTTTTAAAATTTATTATGGTCATGTTCTTGATATTAAAGATAGAGTTGATTTTTTGTTTATCCCCCGCTTAATA GCCCTTGGTGATAAGAACAAGGTGTGTCCCAAATTTATGGGGTTGCCTGATATGGTAAGGGCTACCCTTGATAATCTTCC ACCTGTCCTTGAACCTGTTATTGATCTCAAAAGGGGGATTTTCTCACTCAGGAAAGTTTCCCATTATATTGGAACAAGGT TAAAAACAAATTACTGGAAAACTGAACGGGCCTTCTGGACAGCCCTTAATAAATACCGTAAATATATAAAGCTAATGGAG CAGGGTTATACTCCCGATGAGAGCAGGAAAATAATTAATGGTCAAAAAATAGATAAAAATAAATCGAAAAAGGACAGGGG TATTAGAGTCGGGGTCCTGGGTCATTCCTATATTATTCATGATAATCAGCTCAGTCTTGGACTTATAAATAATTTACAAA AAATGGGGGTTGAAGTTATTACCCCGGAAATGATTAGTAATAATGATCTGGAAAGAGCAGCTGAACTACAGTCCAAAAAG CTTTTCTGGTTGTTTAATCGCCATATAATGGGGGCTGCCTACCATTTATTATTTAACTATGAAAAAGACATCGATGGAAT AATTCAAATAACCGCCTTTGGATGTGGCCCTGATTCTCTTGTCAAAGAACTGGTTAATTTAAAAGGAAAAAATAATAAAA ACGTGTCTTTATTAAATTTAAATGTTGATGAACACAGTGGTGAAGCAGGTTTGTTAACAAGAATTGAAGCCTTTATAGAC TTAATTGAAAGGAAGAAAGGAAAAAATGGGTAA
Upstream 100 bases:
>100_bases TATGGATTTATCCCATATTAGACCTGAAGCCTTAAAGACCCAGGACAAAGATAGAACTGTAAAAGAAGATGATAAGGAAA GAAACAGGGAGTGATGAAAA
Downstream 100 bases:
>100_bases GATTACCTTCCCCCATATGGGTAATTTAAATATTATTGCAAAAACTTTTTTCCAGGAAATGGGTATAGAAGTTGTTGTTC CCCCGGGTAATTCCAAAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: CoA Activase; BadF/BadG/BcrA/BcrD ATPase Family Protein; Activator Of-2-Hydroxyglutaryl-CoA Dehydratase; CoA-Substrate-Specific Activase Domain Protein; Chaperone Protein DNAJ; (R)-2-Hydroxyglutaryl-CoA Dehydratase Activator; BadF/BadG/BcrA/BcrD ATPase; CoA- Activase; 2-Hydroxyglutaryl-CoA Dehydratase Activator
Number of amino acids: Translated: 330; Mature: 329
Protein sequence:
>330_residues MGSKIGVPRALLYHYYYPAWEEFFNRLGFEIVLSKPTNKEILNRGVKLAVDDLCLPFKIYYGHVLDIKDRVDFLFIPRLI ALGDKNKVCPKFMGLPDMVRATLDNLPPVLEPVIDLKRGIFSLRKVSHYIGTRLKTNYWKTERAFWTALNKYRKYIKLME QGYTPDESRKIINGQKIDKNKSKKDRGIRVGVLGHSYIIHDNQLSLGLINNLQKMGVEVITPEMISNNDLERAAELQSKK LFWLFNRHIMGAAYHLLFNYEKDIDGIIQITAFGCGPDSLVKELVNLKGKNNKNVSLLNLNVDEHSGEAGLLTRIEAFID LIERKKGKNG
Sequences:
>Translated_330_residues MGSKIGVPRALLYHYYYPAWEEFFNRLGFEIVLSKPTNKEILNRGVKLAVDDLCLPFKIYYGHVLDIKDRVDFLFIPRLI ALGDKNKVCPKFMGLPDMVRATLDNLPPVLEPVIDLKRGIFSLRKVSHYIGTRLKTNYWKTERAFWTALNKYRKYIKLME QGYTPDESRKIINGQKIDKNKSKKDRGIRVGVLGHSYIIHDNQLSLGLINNLQKMGVEVITPEMISNNDLERAAELQSKK LFWLFNRHIMGAAYHLLFNYEKDIDGIIQITAFGCGPDSLVKELVNLKGKNNKNVSLLNLNVDEHSGEAGLLTRIEAFID LIERKKGKNG >Mature_329_residues GSKIGVPRALLYHYYYPAWEEFFNRLGFEIVLSKPTNKEILNRGVKLAVDDLCLPFKIYYGHVLDIKDRVDFLFIPRLIA LGDKNKVCPKFMGLPDMVRATLDNLPPVLEPVIDLKRGIFSLRKVSHYIGTRLKTNYWKTERAFWTALNKYRKYIKLMEQ GYTPDESRKIINGQKIDKNKSKKDRGIRVGVLGHSYIIHDNQLSLGLINNLQKMGVEVITPEMISNNDLERAAELQSKKL FWLFNRHIMGAAYHLLFNYEKDIDGIIQITAFGCGPDSLVKELVNLKGKNNKNVSLLNLNVDEHSGEAGLLTRIEAFIDL IERKKGKNG
Specific function: Unknown
COG id: COG3580
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37897; Mature: 37766
Theoretical pI: Translated: 9.96; Mature: 9.96
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGSKIGVPRALLYHYYYPAWEEFFNRLGFEIVLSKPTNKEILNRGVKLAVDDLCLPFKIY CCCCCCCCHHHHHHHCCHHHHHHHHHCCEEEEEECCCCHHHHHCCCEEEHHHHCHHEEEE YGHVLDIKDRVDFLFIPRLIALGDKNKVCPKFMGLPDMVRATLDNLPPVLEPVIDLKRGI CCEEEEHHHCCCHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH FSLRKVSHYIGTRLKTNYWKTERAFWTALNKYRKYIKLMEQGYTPDESRKIINGQKIDKN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC KSKKDRGIRVGVLGHSYIIHDNQLSLGLINNLQKMGVEVITPEMISNNDLERAAELQSKK CCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCEEECCHHHCCCCHHHHHHHHHCH LFWLFNRHIMGAAYHLLFNYEKDIDGIIQITAFGCGPDSLVKELVNLKGKNNKNVSLLNL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEE NVDEHSGEAGLLTRIEAFIDLIERKKGKNG ECCCCCCCHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure GSKIGVPRALLYHYYYPAWEEFFNRLGFEIVLSKPTNKEILNRGVKLAVDDLCLPFKIY CCCCCCCHHHHHHHCCHHHHHHHHHCCEEEEEECCCCHHHHHCCCEEEHHHHCHHEEEE YGHVLDIKDRVDFLFIPRLIALGDKNKVCPKFMGLPDMVRATLDNLPPVLEPVIDLKRGI CCEEEEHHHCCCHHHHHHHHHCCCCCCCCHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHH FSLRKVSHYIGTRLKTNYWKTERAFWTALNKYRKYIKLMEQGYTPDESRKIINGQKIDKN HHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCCCCCCCC KSKKDRGIRVGVLGHSYIIHDNQLSLGLINNLQKMGVEVITPEMISNNDLERAAELQSKK CCCCCCCEEEEEECCEEEEECCCCCHHHHHHHHHCCCEEECCHHHCCCCHHHHHHHHHCH LFWLFNRHIMGAAYHLLFNYEKDIDGIIQITAFGCGPDSLVKELVNLKGKNNKNVSLLNL HHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCCEEEEEE NVDEHSGEAGLLTRIEAFIDLIERKKGKNG ECCCCCCCHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA