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The map label for this gene is yqjE [H]

Identifier: 220931525

GI number: 220931525

Start: 738125

End: 739258

Strand: Direct

Name: yqjE [H]

Synonym: Hore_06810

Alternate gene names: 220931525

Gene position: 738125-739258 (Clockwise)

Preceding gene: 220931524

Following gene: 220931526

Centisome position: 28.63

GC content: 39.59

Gene sequence:

>1134_bases
ATGCCTGTTAATAAAGATAGAATAGTAAAGTTATTTAAGGAGCTTGTACAGATAGATAGTATCTCCCTTGAAGAACGTCT
TATGGTTGATAGATTAACTCAGGAATTGAAGGATCTCGGTGCTGATGTTGTTGAAGATGAAACAGGGAAGAAAATCGGTG
GTAATGCTGGTAATATTATTGCTGATTTCAGGGGTAATAAAGATGTTCCCAGTCTGGTTTTATCGGCCCATATGGATCGG
GTACAGCCAGGTAAGGGCATAAAACCGGTAATAAAGGGTGATTATATTACAAGTAGCGGGGATACAGTGCTGGGTGGGGA
TGACCTGGTAGGGGTTTGCGCAATATTAGAAACTTTAAGAGTTCTTAAAGAAGATAATGTTTCCACTGGTCCCTTGAAAA
TAATATTTACAGTGGCTGAAGAATTAGGGTTACAGGGGGGCAAATACTTACATAGTTCTCATTTGGCAGAGGCTGATTTT
GGTGTGGTTCTGGACGCTGATGGGGATATTGGTACTATTATAAACCGGGCCCCGAGCCAGATTAAATTTAATGCTATAAT
AAAGGGGCGCTCAGCCCATGCCGGTATGAATCCTGAAAGGGGTATAAATGCTATTAAAATTGCCAGCCAGGCAATCTCCA
GTATGAGACTGGGGAGAATAAATAAATATACGACAGCAAATATCGGGGTAATCAAAGGTGGGATTGCTACTAATGTTGTC
CCGGATATGGTTGTACTGGAAGGTGAGGCCCGCAGTCACCATGAAATGGAATTAAATAAACAGGTAGAACATATGAAAGG
TGTTATAGAAAAAGCTGTTGAGCGTTATTCGGGTAGTGCCGAGTTTAAGCTGAAAAAGTTATATTCAAGCTTTTCTCTTG
AAGAAAACAAACAACCGGTTAAATATGTCAAAGAAATAGGTGAAAAGCTTGGTTATAATGTGAATTGTATTGCCAGTGGA
GGCGGAAGTGATGCTAATATTTTCAATGAGAAGGGCTTACCAACGGTAAATCTGGGGATTGGTATGGAAAATGTACATAC
CAGAGAAGAACGTGTTAAAATAAAAAGCCTGGTAGACATTACAGAATATGTTACTAATCTGGTAACGTCAGCAAGACACT
TAAAAAACCTTTAA

Upstream 100 bases:

>100_bases
AGAAAAAAATAAGTTATATAGAAGGATTTTAAGTATCTTTCGGGAATAATACATAGTATGATACGATGGCCTGTAGTCTG
ACTGAGGAGGAATAATATTT

Downstream 100 bases:

>100_bases
GAGGGAATTTTTAATGGTTTATGATTTATCCCGGGCACCGGGTACAGTAAAAAAAATAATAAAGGAACATAAAGATAGAA
AACAGATTGTGGAAGTAGAG

Product: peptidase T-like protein

Products: Acetate; Ornithine [C]

Alternate protein names: NA

Number of amino acids: Translated: 377; Mature: 376

Protein sequence:

>377_residues
MPVNKDRIVKLFKELVQIDSISLEERLMVDRLTQELKDLGADVVEDETGKKIGGNAGNIIADFRGNKDVPSLVLSAHMDR
VQPGKGIKPVIKGDYITSSGDTVLGGDDLVGVCAILETLRVLKEDNVSTGPLKIIFTVAEELGLQGGKYLHSSHLAEADF
GVVLDADGDIGTIINRAPSQIKFNAIIKGRSAHAGMNPERGINAIKIASQAISSMRLGRINKYTTANIGVIKGGIATNVV
PDMVVLEGEARSHHEMELNKQVEHMKGVIEKAVERYSGSAEFKLKKLYSSFSLEENKQPVKYVKEIGEKLGYNVNCIASG
GGSDANIFNEKGLPTVNLGIGMENVHTREERVKIKSLVDITEYVTNLVTSARHLKNL

Sequences:

>Translated_377_residues
MPVNKDRIVKLFKELVQIDSISLEERLMVDRLTQELKDLGADVVEDETGKKIGGNAGNIIADFRGNKDVPSLVLSAHMDR
VQPGKGIKPVIKGDYITSSGDTVLGGDDLVGVCAILETLRVLKEDNVSTGPLKIIFTVAEELGLQGGKYLHSSHLAEADF
GVVLDADGDIGTIINRAPSQIKFNAIIKGRSAHAGMNPERGINAIKIASQAISSMRLGRINKYTTANIGVIKGGIATNVV
PDMVVLEGEARSHHEMELNKQVEHMKGVIEKAVERYSGSAEFKLKKLYSSFSLEENKQPVKYVKEIGEKLGYNVNCIASG
GGSDANIFNEKGLPTVNLGIGMENVHTREERVKIKSLVDITEYVTNLVTSARHLKNL
>Mature_376_residues
PVNKDRIVKLFKELVQIDSISLEERLMVDRLTQELKDLGADVVEDETGKKIGGNAGNIIADFRGNKDVPSLVLSAHMDRV
QPGKGIKPVIKGDYITSSGDTVLGGDDLVGVCAILETLRVLKEDNVSTGPLKIIFTVAEELGLQGGKYLHSSHLAEADFG
VVLDADGDIGTIINRAPSQIKFNAIIKGRSAHAGMNPERGINAIKIASQAISSMRLGRINKYTTANIGVIKGGIATNVVP
DMVVLEGEARSHHEMELNKQVEHMKGVIEKAVERYSGSAEFKLKKLYSSFSLEENKQPVKYVKEIGEKLGYNVNCIASGG
GSDANIFNEKGLPTVNLGIGMENVHTREERVKIKSLVDITEYVTNLVTSARHLKNL

Specific function: Could be a peptidase [H]

COG id: COG2195

COG function: function code E; Di- and tripeptidases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20A family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001261
- InterPro:   IPR010162
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: 3.5.1.16 [C]

Molecular weight: Translated: 40911; Mature: 40779

Theoretical pI: Translated: 7.03; Mature: 7.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPVNKDRIVKLFKELVQIDSISLEERLMVDRLTQELKDLGADVVEDETGKKIGGNAGNII
CCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEE
ADFRGNKDVPSLVLSAHMDRVQPGKGIKPVIKGDYITSSGDTVLGGDDLVGVCAILETLR
EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHH
VLKEDNVSTGPLKIIFTVAEELGLQGGKYLHSSHLAEADFGVVLDADGDIGTIINRAPSQ
HHHHCCCCCCCHHHHEEEHHHHCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHCCCCC
IKFNAIIKGRSAHAGMNPERGINAIKIASQAISSMRLGRINKYTTANIGVIKGGIATNVV
EEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCC
PDMVVLEGEARSHHEMELNKQVEHMKGVIEKAVERYSGSAEFKLKKLYSSFSLEENKQPV
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHH
KYVKEIGEKLGYNVNCIASGGGSDANIFNEKGLPTVNLGIGMENVHTREERVKIKSLVDI
HHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
TEYVTNLVTSARHLKNL
HHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
PVNKDRIVKLFKELVQIDSISLEERLMVDRLTQELKDLGADVVEDETGKKIGGNAGNII
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHCCCCCCCCCCCCCCEE
ADFRGNKDVPSLVLSAHMDRVQPGKGIKPVIKGDYITSSGDTVLGGDDLVGVCAILETLR
EECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEECCCCEEECCCHHHHHHHHHHHHH
VLKEDNVSTGPLKIIFTVAEELGLQGGKYLHSSHLAEADFGVVLDADGDIGTIINRAPSQ
HHHHCCCCCCCHHHHEEEHHHHCCCCCCCHHHHHCCCCCCCEEEECCCCHHHHHHCCCCC
IKFNAIIKGRSAHAGMNPERGINAIKIASQAISSMRLGRINKYTTANIGVIKGGIATNVV
EEEEEEEECCCCCCCCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCEEEECCHHHCCC
PDMVVLEGEARSHHEMELNKQVEHMKGVIEKAVERYSGSAEFKLKKLYSSFSLEENKQPV
CCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCHH
KYVKEIGEKLGYNVNCIASGGGSDANIFNEKGLPTVNLGIGMENVHTREERVKIKSLVDI
HHHHHHHHHHCCCEEEEECCCCCCCCEECCCCCCEEEECCCCCHHHHHHHHHHHHHHHHH
TEYVTNLVTSARHLKNL
HHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: Glutathione. [C]

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N2-Acetyl-L-ornithine; H2O [C]

Specific reaction: N2-Acetyl-L-ornithine + H2O --> Acetate + Ornithine [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]