| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
Click here to switch to the map view.
The map label for this gene is 220931515
Identifier: 220931515
GI number: 220931515
Start: 728202
End: 728882
Strand: Direct
Name: 220931515
Synonym: Hore_06710
Alternate gene names: NA
Gene position: 728202-728882 (Clockwise)
Preceding gene: 220931514
Following gene: 220931516
Centisome position: 28.25
GC content: 37.15
Gene sequence:
>681_bases TTGGATTTTAATCATATTACTATTTTTACTGGGAACTATGGAAGTGGCAAGACCGAACTAGCTATTAATTATGCACAATG GTTATCTAAAAGGGTTTCCAGGGTATTACTGGTAGACCTGGATGTAATAAATCCCTATTTCAGGTCCCGGGAAAAGGTTA AGATGCTGGAAGAACAGGACATTGAAGTCATTTATCCTAAAAACCTGGCTCAGGCAGATTTACCAATAATTACAGCTGAT GTTAAAAAAGTTATGCATAATAAAGATGTATATGGAATCATTGACGTCGGTGGTGATGAAGAAGGAGCTATTGCCCTGGG TAGTTCTTTCAGGGAACTTGAAGGGCAAAAATATGAAATGAATCTGGTTGTAAATACAATGAGGCCTTTTACCAGTAATG TTGATGGAATAATACTGGCCAAAGAAAGGATAGAAAAGAGGAGCCAGCTAGAATTTTCAGGAATTATATGTAATATTAAT CTGGGTCGGGAAACAGAATTAAAACATATTGAAGAAGGGTATCCTGTTGTTAAAGAGGCTGCCAGCAAAATGGGACTTCC CATTAAATTTATAGCTATCTGGGAGGAACTGTTACCCCTGTCAAATGACCTGAAGATTGAAGAGGAAATTTTTCCGGTGA AGTTATATAATAATCCACCCTGGATAAATAAAAAGGGGTGA
Upstream 100 bases:
>100_bases TACTTTTATAAAAGATTTTAAACTGAATAAACCGGTGAATTTTTAAAATTATCATTTTCAAATACATTTTTCAAATAATT AAAAAAAGGAGGAAATATTT
Downstream 100 bases:
>100_bases AATAATGTCTGAAAAGGTTAATTTTAAACAATTAAGTGAATTAAACCGGAAGACAGATGTTATATTAAATTCAACTCATG ATGGCCTTATATCTATTGGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 226; Mature: 226
Protein sequence:
>226_residues MDFNHITIFTGNYGSGKTELAINYAQWLSKRVSRVLLVDLDVINPYFRSREKVKMLEEQDIEVIYPKNLAQADLPIITAD VKKVMHNKDVYGIIDVGGDEEGAIALGSSFRELEGQKYEMNLVVNTMRPFTSNVDGIILAKERIEKRSQLEFSGIICNIN LGRETELKHIEEGYPVVKEAASKMGLPIKFIAIWEELLPLSNDLKIEEEIFPVKLYNNPPWINKKG
Sequences:
>Translated_226_residues MDFNHITIFTGNYGSGKTELAINYAQWLSKRVSRVLLVDLDVINPYFRSREKVKMLEEQDIEVIYPKNLAQADLPIITAD VKKVMHNKDVYGIIDVGGDEEGAIALGSSFRELEGQKYEMNLVVNTMRPFTSNVDGIILAKERIEKRSQLEFSGIICNIN LGRETELKHIEEGYPVVKEAASKMGLPIKFIAIWEELLPLSNDLKIEEEIFPVKLYNNPPWINKKG >Mature_226_residues MDFNHITIFTGNYGSGKTELAINYAQWLSKRVSRVLLVDLDVINPYFRSREKVKMLEEQDIEVIYPKNLAQADLPIITAD VKKVMHNKDVYGIIDVGGDEEGAIALGSSFRELEGQKYEMNLVVNTMRPFTSNVDGIILAKERIEKRSQLEFSGIICNIN LGRETELKHIEEGYPVVKEAASKMGLPIKFIAIWEELLPLSNDLKIEEEIFPVKLYNNPPWINKKG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25743; Mature: 25743
Theoretical pI: Translated: 5.05; Mature: 5.05
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDFNHITIFTGNYGSGKTELAINYAQWLSKRVSRVLLVDLDVINPYFRSREKVKMLEEQD CCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHEEEEEEEHHHCHHHCCHHHHHHHHHCC IEVIYPKNLAQADLPIITADVKKVMHNKDVYGIIDVGGDEEGAIALGSSFRELEGQKYEM CEEECCCCCCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHHHHCCCEEEE NLVVNTMRPFTSNVDGIILAKERIEKRSQLEFSGIICNINLGRETELKHIEEGYPVVKEA EEEEEECCCCCCCCCEEEEEHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHCCCCHHHHH ASKMGLPIKFIAIWEELLPLSNDLKIEEEIFPVKLYNNPPWINKKG HHHCCCCEEHHHHHHHHCCCCCCCEEECEEEEEEEECCCCCCCCCC >Mature Secondary Structure MDFNHITIFTGNYGSGKTELAINYAQWLSKRVSRVLLVDLDVINPYFRSREKVKMLEEQD CCCCEEEEEECCCCCCCEEEEEEHHHHHHHHHHEEEEEEEHHHCHHHCCHHHHHHHHHCC IEVIYPKNLAQADLPIITADVKKVMHNKDVYGIIDVGGDEEGAIALGSSFRELEGQKYEM CEEECCCCCCCCCCCEEHHHHHHHHCCCCEEEEEECCCCCCCEEEECCCHHHHCCCEEEE NLVVNTMRPFTSNVDGIILAKERIEKRSQLEFSGIICNINLGRETELKHIEEGYPVVKEA EEEEEECCCCCCCCCEEEEEHHHHHHHHCCEEEEEEEEEECCCCCHHHHHHCCCCHHHHH ASKMGLPIKFIAIWEELLPLSNDLKIEEEIFPVKLYNNPPWINKKG HHHCCCCEEHHHHHHHHCCCCCCCEEECEEEEEEEECCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA