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The map label for this gene is yrhO [H]

Identifier: 220931508

GI number: 220931508

Start: 719316

End: 720125

Strand: Direct

Name: yrhO [H]

Synonym: Hore_06640

Alternate gene names: 220931508

Gene position: 719316-720125 (Clockwise)

Preceding gene: 220931507

Following gene: 220931509

Centisome position: 27.9

GC content: 34.07

Gene sequence:

>810_bases
ATGGCAGCTAGTAAAGAGGAAGTCATTAAAAATCTGGTAGGTATCGGTTTTAATCAGTATGAAGCCAAGACCTATGTTGC
TTTATTACAGAACCCCAATAGTACCGCATATGAGTTAAGCAAGAACTCGGGTGTTCCCCAGTCCAAGGTCTATGAAACTA
TTAAAAACCTTGTGTCCAAAGGTTTAGCAGTTGCAGAGGGTCAAAGACCTGTAAAATATTCACCCCTTCCCATAGAAGAA
TTTTTGGAAAGATATAAAAAATCTGTAGAAGAGTCTGTTTCTTTTCTAAAGAAAAATTTAAAAGACATAAATGATCAACC
ACAGATAGATTATATGTGGCATTTTGAAGGTAGGGACAGGATACTTAACAAAGTTTCCAGTATGATTAATAATGCAGAAA
AAAACCTCTATTTTGAAATATGGATTGATGAACTTGAAATTCTCTGTGATGATCTTATAAAGGCCGAAGACCGGGGTGTG
GATATTGTACTGGTTCAGTATGGTCATAATAACAGCTGTGATATAGGCAAGGTATATTATCATCAGATGGATGGAATGGA
AAAAGATGCAGAAAGAGTAGGGAGATGGTTAACCGTTATTAAGGATGCCAGAGAATCTCTCTTTGGTATTTTTAAAGAAG
ACAATAATTATGCTATATGGACCCAGAATAAAAGTTTTATGCTTATGGCTGAAAGTTTTATTTCACATGATATCTATATA
GCAGAAATGTATAGTAAATATAAAGACCTGATTGAACAGGAATTTGGACCCAATTTTAAAAAGTTAAGGGATATTATTTC
AATAGGTTAA

Upstream 100 bases:

>100_bases
AAATATTAATAGTCATAAAACCTTGACATAAATTATGAAAATATTTATAATAACCGTTAGTAGTCACCTAAGTAGTAAGT
ATTTAAGGAGGAAATAAATT

Downstream 100 bases:

>100_bases
GAACTATTTTAATAATTTTATTTATAATTTTACAATAAATATAATTTATTTTTGGAAACCGCCAAGAGGCGGTTTTTTAA
TTGTCATCAAATTTGATATA

Product: transcriptional regulator, TrmB

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MAASKEEVIKNLVGIGFNQYEAKTYVALLQNPNSTAYELSKNSGVPQSKVYETIKNLVSKGLAVAEGQRPVKYSPLPIEE
FLERYKKSVEESVSFLKKNLKDINDQPQIDYMWHFEGRDRILNKVSSMINNAEKNLYFEIWIDELEILCDDLIKAEDRGV
DIVLVQYGHNNSCDIGKVYYHQMDGMEKDAERVGRWLTVIKDARESLFGIFKEDNNYAIWTQNKSFMLMAESFISHDIYI
AEMYSKYKDLIEQEFGPNFKKLRDIISIG

Sequences:

>Translated_269_residues
MAASKEEVIKNLVGIGFNQYEAKTYVALLQNPNSTAYELSKNSGVPQSKVYETIKNLVSKGLAVAEGQRPVKYSPLPIEE
FLERYKKSVEESVSFLKKNLKDINDQPQIDYMWHFEGRDRILNKVSSMINNAEKNLYFEIWIDELEILCDDLIKAEDRGV
DIVLVQYGHNNSCDIGKVYYHQMDGMEKDAERVGRWLTVIKDARESLFGIFKEDNNYAIWTQNKSFMLMAESFISHDIYI
AEMYSKYKDLIEQEFGPNFKKLRDIISIG
>Mature_268_residues
AASKEEVIKNLVGIGFNQYEAKTYVALLQNPNSTAYELSKNSGVPQSKVYETIKNLVSKGLAVAEGQRPVKYSPLPIEEF
LERYKKSVEESVSFLKKNLKDINDQPQIDYMWHFEGRDRILNKVSSMINNAEKNLYFEIWIDELEILCDDLIKAEDRGVD
IVLVQYGHNNSCDIGKVYYHQMDGMEKDAERVGRWLTVIKDARESLFGIFKEDNNYAIWTQNKSFMLMAESFISHDIYIA
EMYSKYKDLIEQEFGPNFKKLRDIISIG

Specific function: Unknown

COG id: COG1378

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR021586
- InterPro:   IPR002831
- InterPro:   IPR011991 [H]

Pfam domain/function: PF11495 Regulator_TrmB; PF01978 TrmB [H]

EC number: NA

Molecular weight: Translated: 31175; Mature: 31044

Theoretical pI: Translated: 5.00; Mature: 5.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAASKEEVIKNLVGIGFNQYEAKTYVALLQNPNSTAYELSKNSGVPQSKVYETIKNLVSK
CCCCHHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHC
GLAVAEGQRPVKYSPLPIEEFLERYKKSVEESVSFLKKNLKDINDQPQIDYMWHFEGRDR
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHH
ILNKVSSMINNAEKNLYFEIWIDELEILCDDLIKAEDRGVDIVLVQYGHNNSCDIGKVYY
HHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
HQMDGMEKDAERVGRWLTVIKDARESLFGIFKEDNNYAIWTQNKSFMLMAESFISHDIYI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCEEEHHHHHHHCCHHH
AEMYSKYKDLIEQEFGPNFKKLRDIISIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC
>Mature Secondary Structure 
AASKEEVIKNLVGIGFNQYEAKTYVALLQNPNSTAYELSKNSGVPQSKVYETIKNLVSK
CCCHHHHHHHHHHCCCCHHHHHHHEEEEECCCCCCEEECCCCCCCHHHHHHHHHHHHHC
GLAVAEGQRPVKYSPLPIEEFLERYKKSVEESVSFLKKNLKDINDQPQIDYMWHFEGRDR
CCEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEEECCHHH
ILNKVSSMINNAEKNLYFEIWIDELEILCDDLIKAEDRGVDIVLVQYGHNNSCDIGKVYY
HHHHHHHHHHHHHHCEEEEEEHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCHHHHHH
HQMDGMEKDAERVGRWLTVIKDARESLFGIFKEDNNYAIWTQNKSFMLMAESFISHDIYI
HHHCCCHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEECCCCEEEHHHHHHHCCHHH
AEMYSKYKDLIEQEFGPNFKKLRDIISIG
HHHHHHHHHHHHHHHCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9308178; 9384377 [H]