| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is spoIIIAA [H]
Identifier: 220931461
GI number: 220931461
Start: 670973
End: 671923
Strand: Direct
Name: spoIIIAA [H]
Synonym: Hore_06170
Alternate gene names: 220931461
Gene position: 670973-671923 (Clockwise)
Preceding gene: 220931460
Following gene: 220931462
Centisome position: 26.03
GC content: 37.75
Gene sequence:
>951_bases ATGATAAAAAATCTTTTTAGTTATTTACCACCGGATATAAGGTCTGCTGTTCAAAATATAAATGAAAACTATAGAGAAAA AATTATTGAAATTCGCCTCAGGGTTAATCAGCCATTACAGATAATAGGCCTGGATGGAGATTATTTTATTGATAGCCACG GACAAAAAACCAGTAAAAGAAATGCATACATAGTTAACAGGGAGGATGTAAAAAAAGCAGTAACAATTCTTACTGATAAT TCAGTTTATGCTGTAGAAAGACAGCTGGCAGAAGGATTTATTACCATTCCGGGAGGCCACCGTATTGGCTTTACTGGACA GGCTGTTGTTGAGAGTGGGGAAATAAGGTTAATAAAAAATATAAATTGCCTTAATTATAGAATTACCAGGGAAATGATTG GAGTCGGGAATAAAGTAATCAAACAAATCTATGACTTTAAAAACAGGGTCTATTACAATACAATGATTGTATCCCCACCA CTTTGTGGAAAAACGACCCTCCTCCGGGATATAGTGAGATTGATCAGTAATGGCATTAAAAAATACGGGATTCCGGGAAA AAAAGTAGGGGTGGTTGATGAAAGATCAGAGATTGGAGGGGCATATAATGGCATTCCCGGGAATAGAATAGGAAGTAGGA CAGACCTGCTGGATAATTGTCCCAAGGCAAAGGGGATATCCCTGTTGGTAAGGTCAATGTCCCCTGAAGTTATTGCAGTA GATGAAATAGGTAATGAAGAAGATGTTATTGCTATCCAGGAAGCCACCAATTCTGGAGTAAGCCTCATTGCTACCGCCCA TGGTGAAAACCTGACAACATTGAAAATGAGGCCCGCTATGGCCAGACTTATGAGTAAAAATTTTTTTGATAGATTTATAA TACTGAGCCGGAAAAGGGGAATTGGAACAGTTGAAAAAATTATAGACTCTACAGGTAAGGAGGTAGTTTAA
Upstream 100 bases:
>100_bases CAGGAGGTAGATAGAATATATTGATTAATGGACAAACATTATTAATTTAATACCGGTTCGATTTTGTAAAAAATATTAAA AAAATACTCTGGGGGTGATA
Downstream 100 bases:
>100_bases ATGTTGGTCAAATTAATAGGATCCCTGTTAATCCTCATTTCCGGATCTTCCCTGGGATGGTTAATTGGGTTTCATTATCT TAAACGTATTAAGGAATTAA
Product: Sporulation stage III protein AA
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 316; Mature: 316
Protein sequence:
>316_residues MIKNLFSYLPPDIRSAVQNINENYREKIIEIRLRVNQPLQIIGLDGDYFIDSHGQKTSKRNAYIVNREDVKKAVTILTDN SVYAVERQLAEGFITIPGGHRIGFTGQAVVESGEIRLIKNINCLNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPP LCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSEIGGAYNGIPGNRIGSRTDLLDNCPKAKGISLLVRSMSPEVIAV DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLMSKNFFDRFIILSRKRGIGTVEKIIDSTGKEVV
Sequences:
>Translated_316_residues MIKNLFSYLPPDIRSAVQNINENYREKIIEIRLRVNQPLQIIGLDGDYFIDSHGQKTSKRNAYIVNREDVKKAVTILTDN SVYAVERQLAEGFITIPGGHRIGFTGQAVVESGEIRLIKNINCLNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPP LCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSEIGGAYNGIPGNRIGSRTDLLDNCPKAKGISLLVRSMSPEVIAV DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLMSKNFFDRFIILSRKRGIGTVEKIIDSTGKEVV >Mature_316_residues MIKNLFSYLPPDIRSAVQNINENYREKIIEIRLRVNQPLQIIGLDGDYFIDSHGQKTSKRNAYIVNREDVKKAVTILTDN SVYAVERQLAEGFITIPGGHRIGFTGQAVVESGEIRLIKNINCLNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPP LCGKTTLLRDIVRLISNGIKKYGIPGKKVGVVDERSEIGGAYNGIPGNRIGSRTDLLDNCPKAKGISLLVRSMSPEVIAV DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLMSKNFFDRFIILSRKRGIGTVEKIIDSTGKEVV
Specific function: Unknown
COG id: COG3854
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003593 - InterPro: IPR014217 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35168; Mature: 35168
Theoretical pI: Translated: 9.93; Mature: 9.93
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKNLFSYLPPDIRSAVQNINENYREKIIEIRLRVNQPLQIIGLDGDYFIDSHGQKTSKR CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCEEECCCCCCCCCC NAYIVNREDVKKAVTILTDNSVYAVERQLAEGFITIPGGHRIGFTGQAVVESGEIRLIKN CEEEEEHHHHHHEEEEEECCCHHHHHHHHHCCEEECCCCCEECCCCHHEEECCCEEEEEC INCLNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPPLCGKTTLLRDIVRLISNGIK CCCHHEEHHHHHHHCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHH KYGIPGKKVGVVDERSEIGGAYNGIPGNRIGSRTDLLDNCPKAKGISLLVRSMSPEVIAV HHCCCCCEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEE DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLMSKNFFDRFIILSRKRG ECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHEEEEECCCC IGTVEKIIDSTGKEVV CCHHHHHHHCCCCCCC >Mature Secondary Structure MIKNLFSYLPPDIRSAVQNINENYREKIIEIRLRVNQPLQIIGLDGDYFIDSHGQKTSKR CCCCHHHHCCHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEEECCCCEEECCCCCCCCCC NAYIVNREDVKKAVTILTDNSVYAVERQLAEGFITIPGGHRIGFTGQAVVESGEIRLIKN CEEEEEHHHHHHEEEEEECCCHHHHHHHHHCCEEECCCCCEECCCCHHEEECCCEEEEEC INCLNYRITREMIGVGNKVIKQIYDFKNRVYYNTMIVSPPLCGKTTLLRDIVRLISNGIK CCCHHEEHHHHHHHCCHHHHHHHHHHHCEEEEEEEEECCCCCCHHHHHHHHHHHHHCCHH KYGIPGKKVGVVDERSEIGGAYNGIPGNRIGSRTDLLDNCPKAKGISLLVRSMSPEVIAV HHCCCCCEECCCCCHHHCCCCCCCCCCCCCCCHHHHHHCCCCCCCHHHHHHCCCCCEEEE DEIGNEEDVIAIQEATNSGVSLIATAHGENLTTLKMRPAMARLMSKNFFDRFIILSRKRG ECCCCCCCEEEEEECCCCCEEEEEEECCCCEEEEEECHHHHHHHHHHHHHHEEEEECCCC IGTVEKIIDSTGKEVV CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1766372; 8969508; 9384377 [H]