| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931383
Identifier: 220931383
GI number: 220931383
Start: 586305
End: 586607
Strand: Reverse
Name: 220931383
Synonym: Hore_05380
Alternate gene names: NA
Gene position: 586607-586305 (Counterclockwise)
Preceding gene: 220931384
Following gene: 220931382
Centisome position: 22.75
GC content: 42.57
Gene sequence:
>303_bases TTGTCATTTCTGGGTAACCAGGTCAAGGAAAGAACAGATATCTCTGATGAAGTTATTGCCAGTAATATGCTCTCATCCGC AAAAGCAGCTGCCAATGCTTACCTTAATGCAGCTCTAATCAGTCCCACCCCAGAACTTAGAGCCATGTGTGAGGAAAGCC TGCAGCAGATACTTGCTGGCCATTCTCAACTTTCAAAATTAGTAATAGACCAGGGCTGGGAGAGCCCCTATGACTCTCCG GAAAAACAATTACTTGACATGTTAGACAAATCCAAACTGGTAGTTGAAACAAACGAAAAATAA
Upstream 100 bases:
>100_bases AACAGGTTGAATCAAGCATAATGGCGGCAGAAGGAAGGGTCAAAGGTATTCAGCAATTTATAACCGAAAATAAAGTTACA GGTAAGGAGGTAGAATAATA
Downstream 100 bases:
>100_bases AATAGCAAAAAAAAGGGTCAGCTTTCCCTGACCCTTTTATATTCTTGACTACTACTCTCTTTGCATTAATTTAGTTTATT ATTAAAGGCATATTATTTAT
Product: Coat F domain-containing protein
Products: NA
Alternate protein names: Coat F Domain Protein; Spore Coat Protein F
Number of amino acids: Translated: 100; Mature: 99
Protein sequence:
>100_residues MSFLGNQVKERTDISDEVIASNMLSSAKAAANAYLNAALISPTPELRAMCEESLQQILAGHSQLSKLVIDQGWESPYDSP EKQLLDMLDKSKLVVETNEK
Sequences:
>Translated_100_residues MSFLGNQVKERTDISDEVIASNMLSSAKAAANAYLNAALISPTPELRAMCEESLQQILAGHSQLSKLVIDQGWESPYDSP EKQLLDMLDKSKLVVETNEK >Mature_99_residues SFLGNQVKERTDISDEVIASNMLSSAKAAANAYLNAALISPTPELRAMCEESLQQILAGHSQLSKLVIDQGWESPYDSPE KQLLDMLDKSKLVVETNEK
Specific function: Unknown
COG id: COG5577
COG function: function code M; Spore coat protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10996; Mature: 10864
Theoretical pI: Translated: 4.34; Mature: 4.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSFLGNQVKERTDISDEVIASNMLSSAKAAANAYLNAALISPTPELRAMCEESLQQILAG CCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HSQLSKLVIDQGWESPYDSPEKQLLDMLDKSKLVVETNEK HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCC >Mature Secondary Structure SFLGNQVKERTDISDEVIASNMLSSAKAAANAYLNAALISPTPELRAMCEESLQQILAG CCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHH HSQLSKLVIDQGWESPYDSPEKQLLDMLDKSKLVVETNEK HHHHHHHHHHCCCCCCCCCHHHHHHHHHCCCCEEEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA