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The map label for this gene is ydfS [H]

Identifier: 220931379

GI number: 220931379

Start: 581639

End: 582367

Strand: Direct

Name: ydfS [H]

Synonym: Hore_05340

Alternate gene names: 220931379

Gene position: 581639-582367 (Clockwise)

Preceding gene: 220931378

Following gene: 220931380

Centisome position: 22.56

GC content: 36.08

Gene sequence:

>729_bases
ATGCCTTTCTGGGAATCACAGCAAAGTTTAAATGTGTTTCAGTGGATAGCCCGGACAGGAGTAACCTTTGTCTGGCTTTT
TCTTATGACAAAAATAATGGGTCAAAGGGAAGTTGGTAGGCTTACCCTATTTGATTTTATTATTGCCATTACTATAGGGA
CTGTGGCTGCTTCTTCCCTCAGTAATAGCAGAACTAGTTTATTAAGTTCACTTATAAATGTAGGATTTTTGGCTGTTCTA
GATATTGTTCTTGCCATTATTGCACTAAAAAATGCAAAAGTAAGAAGGATCGTTCAGGGTGAACCAATGGTCTTAATACA
GAATGGTAAGCTGCTCGAAGACAGCATGAGGAAATCAAGAATGAATCTGGATGATTTATTAATGGGATTACGCCAGAAAA
AAATATCAAACCTTTCTGATGTGGAATTTGCTATTTTAGAACCCAACGGGAAAATCAGTGTTATTCCCAGGTCTCAATCA
AGGGCCGTAAGGCCAAAAGATCTAAAAATAAACACAGGTTATGAAGGTTTACCGGTTATTGTCATTGAAGATGGTAATAT
TTTAGAAGATAACCTTAAGGAAAATAACCTTGATAAAAACTGGCTTAAGAACCAGTTAAAACAACAGGGTATAGATAACG
TAGAAGAGGTTCTGGTAGGTATGCTTGACACACAGGGTAGGCTATATATAAGTAAAAAAGGTCAGAAAAATGAAGATATT
GTTCATTAA

Upstream 100 bases:

>100_bases
ATGTGATTGATAAAACTAATGTATAAACCAATTAAACTTATAAACCTGTTTATAAACAAATTCAAATAGGTTATGATCAA
TTAAATGAGGTGGCTGAGAA

Downstream 100 bases:

>100_bases
AAATTATTAAAACCTTGAAAGGAGAAATATATGAAGACCAAAAATTACTTGAAAAAACATGTTAAAAGAAAGGACCTCTA
TATATATTTAATGAACAATC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MPFWESQQSLNVFQWIARTGVTFVWLFLMTKIMGQREVGRLTLFDFIIAITIGTVAASSLSNSRTSLLSSLINVGFLAVL
DIVLAIIALKNAKVRRIVQGEPMVLIQNGKLLEDSMRKSRMNLDDLLMGLRQKKISNLSDVEFAILEPNGKISVIPRSQS
RAVRPKDLKINTGYEGLPVIVIEDGNILEDNLKENNLDKNWLKNQLKQQGIDNVEEVLVGMLDTQGRLYISKKGQKNEDI
VH

Sequences:

>Translated_242_residues
MPFWESQQSLNVFQWIARTGVTFVWLFLMTKIMGQREVGRLTLFDFIIAITIGTVAASSLSNSRTSLLSSLINVGFLAVL
DIVLAIIALKNAKVRRIVQGEPMVLIQNGKLLEDSMRKSRMNLDDLLMGLRQKKISNLSDVEFAILEPNGKISVIPRSQS
RAVRPKDLKINTGYEGLPVIVIEDGNILEDNLKENNLDKNWLKNQLKQQGIDNVEEVLVGMLDTQGRLYISKKGQKNEDI
VH
>Mature_241_residues
PFWESQQSLNVFQWIARTGVTFVWLFLMTKIMGQREVGRLTLFDFIIAITIGTVAASSLSNSRTSLLSSLINVGFLAVLD
IVLAIIALKNAKVRRIVQGEPMVLIQNGKLLEDSMRKSRMNLDDLLMGLRQKKISNLSDVEFAILEPNGKISVIPRSQSR
AVRPKDLKINTGYEGLPVIVIEDGNILEDNLKENNLDKNWLKNQLKQQGIDNVEEVLVGMLDTQGRLYISKKGQKNEDIV
H

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=137, Percent_Identity=32.1167883211679, Blast_Score=74, Evalue=1e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 27246; Mature: 27115

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFWESQQSLNVFQWIARTGVTFVWLFLMTKIMGQREVGRLTLFDFIIAITIGTVAASSL
CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHH
SNSRTSLLSSLINVGFLAVLDIVLAIIALKNAKVRRIVQGEPMVLIQNGKLLEDSMRKSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHHHHHHHC
MNLDDLLMGLRQKKISNLSDVEFAILEPNGKISVIPRSQSRAVRPKDLKINTGYEGLPVI
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEE
VIEDGNILEDNLKENNLDKNWLKNQLKQQGIDNVEEVLVGMLDTQGRLYISKKGQKNEDI
EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC
VH
CC
>Mature Secondary Structure 
PFWESQQSLNVFQWIARTGVTFVWLFLMTKIMGQREVGRLTLFDFIIAITIGTVAASSL
CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHH
SNSRTSLLSSLINVGFLAVLDIVLAIIALKNAKVRRIVQGEPMVLIQNGKLLEDSMRKSR
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEECCCCHHHHHHHHC
MNLDDLLMGLRQKKISNLSDVEFAILEPNGKISVIPRSQSRAVRPKDLKINTGYEGLPVI
CCHHHHHHHHHHHHHCCCCCCEEEEECCCCCEEEEECCCCCCCCCCCEEEECCCCCEEEE
VIEDGNILEDNLKENNLDKNWLKNQLKQQGIDNVEEVLVGMLDTQGRLYISKKGQKNEDI
EECCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCC
VH
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]