| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is albA [H]
Identifier: 220931277
GI number: 220931277
Start: 465251
End: 466630
Strand: Direct
Name: albA [H]
Synonym: Hore_04320
Alternate gene names: 220931277
Gene position: 465251-466630 (Clockwise)
Preceding gene: 220931276
Following gene: 220931278
Centisome position: 18.05
GC content: 32.46
Gene sequence:
>1380_bases ATGTCACAAACTTTTATTACTGATAAAATGAAAGAAAATCTTGATAAATATATTATTTTTAATGAGGACGTAGTTGATAT TATCTTTAGATACCCCGACAGGGTTCTAGTTTATAATCATGATACGAGCGGATTGAGTAGATTTATGGGCTTTGGACTTG ATATCCTGTATGATGATTCCCTTGACATTCTGTTGAATAATCCCGACAAATTACTTGGAGAATATAAGCCAGAGTTTATT ACTAAATACATAGAATACTATTATTTCAAAAACTGGATTTGTTTTAGCGATACCCCTAAAACAGAATATAAAATTAGATT TTTGGGAAGTAAAGATTATTACATACCTGGTCACCTGGCTATAGAACTGACGGATAAATGTAATCTCGCTTGCAAACATT GTTATCGGGATTCAACAAAAAAAGGTAAATTAATGGATACTCAGAAGTTATTTTCATTAATAGATATGCTAACTGAAAAA GGATTAATTATTGTGGAGCTAACAGGGGGTGAAATAACCCTTCATCCTGATTTCTGTGAAATAGTTGATTATTTGGCCCA GAAGCTCGATATAATTGCTTTATTAACAAATGGTTATGAATACAATCAGGAAATAATAGAATGTATTCTAAGAAACAAAG ATAAAGTAATGGTTAATGTTAGTCTGGATAGTTATGACCAGGAATTTCATGACAATTTTAGAGGGAAAAAAGGTGCCTGG GAAAGGGCATACAATTTGGTTAAAACACTGGCATCAAATGAAGTTCCAACCAGAATAGCGATGGCTATTACACCAGAGAA CTTATTTCATATCGAAAAAACAATATTATTAGCCAAAGAATTAGGGATAAAAAACTTTGCATGGGATCAGGTATCCCAAT TTGGTAGAGGAAGTAGTATTGATTGGAGTAAGGTAACACCTGAAGAGTATTTTGAATATGAAAAGCAAAGCAAATATTTG TTTAAAAAATATTATGATATGTTAACCTTGATTCCAGCCAAAATAACCAGACAGATGAAAGTTGAAGGATTAAACTGTGG GGCTGGCTGGAGAACCTTTGCCCTTGACCCTGATGGTAATTTAAGATTATGTGTGAATTCAGAACTTGATTTATTCAAGA TTGGGAATGTATTTGAAGAAGGTATGAGCATTTTTAAAAAAGAACTGTTACAAGAGTTTGCAAAAGTCTCTATGCCCAGG TATAGAACTTGTAAAAATTGTAATTATTTTAGTTTTTGCGATAGCTGTACACTTAAGGGTTTAATAGGTGCTAAGAATAA TAAAAACTGTGTCTGGGATGGGAAGAAGCTAGCCAGAAAAGTCAGGACAAGGCAGACTATAAATATTAGTTGCCTTAGTA AAAAGACTATTTCAAAATAA
Upstream 100 bases:
>100_bases TTAGAGTTCTGGGGGTGTTTAGCTTTTAAGCTCCCATTTAATTATTATAAATAATTATTATGAAATATCTAAATTAAATA ATGGGAAGTAGGGTGAAAAA
Downstream 100 bases:
>100_bases GAAAACAATAATGAGAGTGGGGTGTAAACTGTTGATCAAGGAAAGTCTTTCTACGGTTACATTGAATGTAACTAGTAAGT GTAATTATAATTGTAGTTAT
Product: Radical SAM domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 459; Mature: 458
Protein sequence:
>459_residues MSQTFITDKMKENLDKYIIFNEDVVDIIFRYPDRVLVYNHDTSGLSRFMGFGLDILYDDSLDILLNNPDKLLGEYKPEFI TKYIEYYYFKNWICFSDTPKTEYKIRFLGSKDYYIPGHLAIELTDKCNLACKHCYRDSTKKGKLMDTQKLFSLIDMLTEK GLIIVELTGGEITLHPDFCEIVDYLAQKLDIIALLTNGYEYNQEIIECILRNKDKVMVNVSLDSYDQEFHDNFRGKKGAW ERAYNLVKTLASNEVPTRIAMAITPENLFHIEKTILLAKELGIKNFAWDQVSQFGRGSSIDWSKVTPEEYFEYEKQSKYL FKKYYDMLTLIPAKITRQMKVEGLNCGAGWRTFALDPDGNLRLCVNSELDLFKIGNVFEEGMSIFKKELLQEFAKVSMPR YRTCKNCNYFSFCDSCTLKGLIGAKNNKNCVWDGKKLARKVRTRQTINISCLSKKTISK
Sequences:
>Translated_459_residues MSQTFITDKMKENLDKYIIFNEDVVDIIFRYPDRVLVYNHDTSGLSRFMGFGLDILYDDSLDILLNNPDKLLGEYKPEFI TKYIEYYYFKNWICFSDTPKTEYKIRFLGSKDYYIPGHLAIELTDKCNLACKHCYRDSTKKGKLMDTQKLFSLIDMLTEK GLIIVELTGGEITLHPDFCEIVDYLAQKLDIIALLTNGYEYNQEIIECILRNKDKVMVNVSLDSYDQEFHDNFRGKKGAW ERAYNLVKTLASNEVPTRIAMAITPENLFHIEKTILLAKELGIKNFAWDQVSQFGRGSSIDWSKVTPEEYFEYEKQSKYL FKKYYDMLTLIPAKITRQMKVEGLNCGAGWRTFALDPDGNLRLCVNSELDLFKIGNVFEEGMSIFKKELLQEFAKVSMPR YRTCKNCNYFSFCDSCTLKGLIGAKNNKNCVWDGKKLARKVRTRQTINISCLSKKTISK >Mature_458_residues SQTFITDKMKENLDKYIIFNEDVVDIIFRYPDRVLVYNHDTSGLSRFMGFGLDILYDDSLDILLNNPDKLLGEYKPEFIT KYIEYYYFKNWICFSDTPKTEYKIRFLGSKDYYIPGHLAIELTDKCNLACKHCYRDSTKKGKLMDTQKLFSLIDMLTEKG LIIVELTGGEITLHPDFCEIVDYLAQKLDIIALLTNGYEYNQEIIECILRNKDKVMVNVSLDSYDQEFHDNFRGKKGAWE RAYNLVKTLASNEVPTRIAMAITPENLFHIEKTILLAKELGIKNFAWDQVSQFGRGSSIDWSKVTPEEYFEYEKQSKYLF KKYYDMLTLIPAKITRQMKVEGLNCGAGWRTFALDPDGNLRLCVNSELDLFKIGNVFEEGMSIFKKELLQEFAKVSMPRY RTCKNCNYFSFCDSCTLKGLIGAKNNKNCVWDGKKLARKVRTRQTINISCLSKKTISK
Specific function: Required for production of the bacteriocin subtilosin. May activate a metalloenzyme that catalyzes a modification of prosubtilosin [H]
COG id: COG0535
COG function: function code R; Predicted Fe-S oxidoreductases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006638 - InterPro: IPR008792 - InterPro: IPR007197 [H]
Pfam domain/function: PF05402 PqqD; PF04055 Radical_SAM [H]
EC number: NA
Molecular weight: Translated: 53393; Mature: 53262
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.1 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 3.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 5.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSQTFITDKMKENLDKYIIFNEDVVDIIFRYPDRVLVYNHDTSGLSRFMGFGLDILYDDS CCCCEEHHHHHCCCCCEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEECCC LDILLNNPDKLLGEYKPEFITKYIEYYYFKNWICFSDTPKTEYKIRFLGSKDYYIPGHLA EEEEECCCHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEECCEEE IELTDKCNLACKHCYRDSTKKGKLMDTQKLFSLIDMLTEKGLIIVELTGGEITLHPDFCE EEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEECCCHHH IVDYLAQKLDIIALLTNGYEYNQEIIECILRNKDKVMVNVSLDSYDQEFHDNFRGKKGAW HHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCHH ERAYNLVKTLASNEVPTRIAMAITPENLFHIEKTILLAKELGIKNFAWDQVSQFGRGSSI HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC DWSKVTPEEYFEYEKQSKYLFKKYYDMLTLIPAKITRQMKVEGLNCGAGWRTFALDPDGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCC LRLCVNSELDLFKIGNVFEEGMSIFKKELLQEFAKVSMPRYRTCKNCNYFSFCDSCTLKG EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCHHH LIGAKNNKNCVWDGKKLARKVRTRQTINISCLSKKTISK EECCCCCCCCEECCHHHHHHHHHCCEEEEEEECCHHCCC >Mature Secondary Structure SQTFITDKMKENLDKYIIFNEDVVDIIFRYPDRVLVYNHDTSGLSRFMGFGLDILYDDS CCCEEHHHHHCCCCCEEEECCHHHHHHHHCCCEEEEEECCHHHHHHHHHCCCEEEECCC LDILLNNPDKLLGEYKPEFITKYIEYYYFKNWICFSDTPKTEYKIRFLGSKDYYIPGHLA EEEEECCCHHHHHCCCHHHHHHHHHHHHHCCEEEECCCCCCEEEEEEECCCCEEECCEEE IELTDKCNLACKHCYRDSTKKGKLMDTQKLFSLIDMLTEKGLIIVELTGGEITLHPDFCE EEECCCCCHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEEECCEEEECCCHHH IVDYLAQKLDIIALLTNGYEYNQEIIECILRNKDKVMVNVSLDSYDQEFHDNFRGKKGAW HHHHHHHHHEEEEEEECCCHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHCCCCCCHH ERAYNLVKTLASNEVPTRIAMAITPENLFHIEKTILLAKELGIKNFAWDQVSQFGRGSSI HHHHHHHHHHHCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCCCCHHHHHHCCCCCCC DWSKVTPEEYFEYEKQSKYLFKKYYDMLTLIPAKITRQMKVEGLNCGAGWRTFALDPDGN CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEEEEECCCCC LRLCVNSELDLFKIGNVFEEGMSIFKKELLQEFAKVSMPRYRTCKNCNYFSFCDSCTLKG EEEEECCCCCEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHCCCCCCHHHCCCCHHH LIGAKNNKNCVWDGKKLARKVRTRQTINISCLSKKTISK EECCCCCCCCEECCHHHHHHHHHCCEEEEEEECCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: Fe [C]
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9353933; 9384377; 10572140; 10809709; 10809710 [H]