Click here to switch to the map view.

The map label for this gene is yurN [H]

Identifier: 220931273

GI number: 220931273

Start: 460290

End: 461198

Strand: Direct

Name: yurN [H]

Synonym: Hore_04280

Alternate gene names: 220931273

Gene position: 460290-461198 (Clockwise)

Preceding gene: 220931272

Following gene: 220931274

Centisome position: 17.85

GC content: 38.06

Gene sequence:

>909_bases
ATGAGACTAAGTAAAAAAGTAGCACCATATGTGTTTATTTCACCGTTCTACATCCTGTTCTTTATCTTTGGTGCTTTCCC
AATCCTGTATTCCTTTTTCTTAAGTTTTCATATCTGGGATGGAATAAGCCCTAAAGAATTTGTGGGTCTGGAAAATTATC
TATTTGTCCTGACAGATCCCTGGTTCTGGCAATCGGTCTGGAATACATTAGTTATCTTTGTATTGACAACTATACCCCAG
CATGTAATTGCCCTGTTTTTAGCCTTTATTTTAAATTCTAAACTGGTAAAATTCAAGGCCTTATTCAGGTCTTCATACTT
TTTGCCTTATATTACCTCTTCAGTAGCAGTGGCCATGATATTTGGGATGTTATACGGAGAACATTACGGGATATTAAATG
CAATTCTAAAATATGTAGCTAATTTCCCGCCGATTGGAGCCCTTTTTGAAAGTATTGGCTTAAATTTACCGGTCAGATGG
TTGGGTGAGGCAGCCTGGATCAAGCCATCGATTGCCTTGCTTGTAACCTGGCAGTTTACAGGCTGGAATTTAATTATTTA
TTATGCCGGGTTAAAAAATATTCCCCACAACCTATATGAAGCCGCCAGGGTAGATGGGGCCAACATGAGGCAAATATTCT
TCAAAATTACCCTGCCAATGTTGCGGCCGGTTATTTTCTTTGGAATTACTCTGTCTATTATTGGTAACCTTCAGCTTTTT
GAACAACCCTTTATTTTAACTGGAGGGACCGGTGGCACTGGCCGGGCCGGTTTGACTACAGCCCTGTATTTATACCGGAC
TGGTTTTAACTGGAATATGTTTGGAACAGGTAGTGCAATGGCTTATATTCTTTGTATCTTTATTATTATTCTATCTTTAA
TAAATATGAAAATATTTCAGAAAAGATAA

Upstream 100 bases:

>100_bases
ACTCAGGGAAGCTAAAAGAATGATTGAAAGAAGGATGAGAAGAAGGTAAACATTAAATATGGGGGTGGGGTATCCCACCC
CTTTAATAAGGAGGGTTAAC

Downstream 100 bases:

>100_bases
GGGGGGAACAATGTGGAGTTACAGTTAAATAAGAAAGAAAATATCACCAAAGAAAATGTTACCATAGATAAGAAGCAAAA
GGACTGGGTTAAGGTCCTCA

Product: binding-protein-dependent transport systems inner membrane component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 302; Mature: 302

Protein sequence:

>302_residues
MRLSKKVAPYVFISPFYILFFIFGAFPILYSFFLSFHIWDGISPKEFVGLENYLFVLTDPWFWQSVWNTLVIFVLTTIPQ
HVIALFLAFILNSKLVKFKALFRSSYFLPYITSSVAVAMIFGMLYGEHYGILNAILKYVANFPPIGALFESIGLNLPVRW
LGEAAWIKPSIALLVTWQFTGWNLIIYYAGLKNIPHNLYEAARVDGANMRQIFFKITLPMLRPVIFFGITLSIIGNLQLF
EQPFILTGGTGGTGRAGLTTALYLYRTGFNWNMFGTGSAMAYILCIFIIILSLINMKIFQKR

Sequences:

>Translated_302_residues
MRLSKKVAPYVFISPFYILFFIFGAFPILYSFFLSFHIWDGISPKEFVGLENYLFVLTDPWFWQSVWNTLVIFVLTTIPQ
HVIALFLAFILNSKLVKFKALFRSSYFLPYITSSVAVAMIFGMLYGEHYGILNAILKYVANFPPIGALFESIGLNLPVRW
LGEAAWIKPSIALLVTWQFTGWNLIIYYAGLKNIPHNLYEAARVDGANMRQIFFKITLPMLRPVIFFGITLSIIGNLQLF
EQPFILTGGTGGTGRAGLTTALYLYRTGFNWNMFGTGSAMAYILCIFIIILSLINMKIFQKR
>Mature_302_residues
MRLSKKVAPYVFISPFYILFFIFGAFPILYSFFLSFHIWDGISPKEFVGLENYLFVLTDPWFWQSVWNTLVIFVLTTIPQ
HVIALFLAFILNSKLVKFKALFRSSYFLPYITSSVAVAMIFGMLYGEHYGILNAILKYVANFPPIGALFESIGLNLPVRW
LGEAAWIKPSIALLVTWQFTGWNLIIYYAGLKNIPHNLYEAARVDGANMRQIFFKITLPMLRPVIFFGITLSIIGNLQLF
EQPFILTGGTGGTGRAGLTTALYLYRTGFNWNMFGTGSAMAYILCIFIIILSLINMKIFQKR

Specific function: Probably part of the binding-protein-dependent transport system yurMNO. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1175

COG function: function code G; ABC-type sugar transport systems, permease components

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787570, Length=253, Percent_Identity=29.2490118577075, Blast_Score=98, Evalue=7e-22,
Organism=Escherichia coli, GI1789861, Length=298, Percent_Identity=25.8389261744966, Blast_Score=92, Evalue=5e-20,
Organism=Escherichia coli, GI1790465, Length=265, Percent_Identity=28.6792452830189, Blast_Score=72, Evalue=6e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 34473; Mature: 34473

Theoretical pI: Translated: 10.06; Mature: 10.06

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLSKKVAPYVFISPFYILFFIFGAFPILYSFFLSFHIWDGISPKEFVGLENYLFVLTDP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECC
WFWQSVWNTLVIFVLTTIPQHVIALFLAFILNSKLVKFKALFRSSYFLPYITSSVAVAMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
FGMLYGEHYGILNAILKYVANFPPIGALFESIGLNLPVRWLGEAAWIKPSIALLVTWQFT
HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCHHHCCCCEEEEEEEEEC
GWNLIIYYAGLKNIPHNLYEAARVDGANMRQIFFKITLPMLRPVIFFGITLSIIGNLQLF
CCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQPFILTGGTGGTGRAGLTTALYLYRTGFNWNMFGTGSAMAYILCIFIIILSLINMKIFQ
CCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
KR
CC
>Mature Secondary Structure
MRLSKKVAPYVFISPFYILFFIFGAFPILYSFFLSFHIWDGISPKEFVGLENYLFVLTDP
CCCCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHCCCCEEEEEECC
WFWQSVWNTLVIFVLTTIPQHVIALFLAFILNSKLVKFKALFRSSYFLPYITSSVAVAMI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
FGMLYGEHYGILNAILKYVANFPPIGALFESIGLNLPVRWLGEAAWIKPSIALLVTWQFT
HHHHHHCHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCHHHHCCHHHCCCCEEEEEEEEEC
GWNLIIYYAGLKNIPHNLYEAARVDGANMRQIFFKITLPMLRPVIFFGITLSIIGNLQLF
CCEEEEEEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EQPFILTGGTGGTGRAGLTTALYLYRTGFNWNMFGTGSAMAYILCIFIIILSLINMKIFQ
CCCEEEECCCCCCCCHHHHHHHHHHCCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHC
KR
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]