Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is ywrA [H]

Identifier: 220931253

GI number: 220931253

Start: 420996

End: 421595

Strand: Direct

Name: ywrA [H]

Synonym: Hore_04080

Alternate gene names: 220931253

Gene position: 420996-421595 (Clockwise)

Preceding gene: 220931252

Following gene: 220931254

Centisome position: 16.33

GC content: 38.0

Gene sequence:

>600_bases
ATGAAAAAATCTTTGAAAAACCTGGTAAAGCTATTTTTCGTTTTTTTAAAAATAGGTTTATTTACCTTCGGGGGTGGTTT
TGCCATGATTCCCCTGATGGAAAAAGAGATAGTCCGTAAACATGGGTGGATAGAGAAAGAAAAGTTTATTGATGCTATTT
CTATTACCCAGTCAGTGCCAGGAGCTGTTGCCATTAACCTTGCTACCTTTTTTGGTTATAATCTGGCCGGGATTCCCGGG
GCTATAGTTGCTGCAACAGGGACAGCTTTACCGTCTTTTGTAATAGTCCTTATAATTGCCATGGGGTTCAGTAAATTTAA
TAATAACCAGGTTGTTAAAAATATGTTTAAAGGTATCAGGCCTGCTGTTGTCGGATTAATAATATATGCCGGGCTGGATT
TGGCCAGGCATATTGACTGGTCAAAGTTTTTGCTTTGTACTTTTTTAATGACAGTAGTAGCTATCATTATCTTTAATATA
AACCCAGTATCCCTTATCTTGACAGCTATTGTTACTGGATTACTGGTTTACCAGAGGAATACCGGAAGAGATGACCAGGA
AGAGGCTGAAGCAACATCGTTTAAAATACAGGAGTCTTAA

Upstream 100 bases:

>100_bases
ATGATTCTAATGAGAAACTACTTGAAGTAAGGGAAAGTTTGATCAGGGGTGACCACTTCCGGTTTTCTGTAGAAATGACT
TTATAAGAGGCAAATAACCT

Downstream 100 bases:

>100_bases
ATAATTATTATGGGTTTAAGATATTAAAAAATTATAAGGAGTAATAAAAATGTATGAAACATTAATGGCACTCTATTACT
CATTTTTTAAAATAGGTCTT

Product: Chromate transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MKKSLKNLVKLFFVFLKIGLFTFGGGFAMIPLMEKEIVRKHGWIEKEKFIDAISITQSVPGAVAINLATFFGYNLAGIPG
AIVAATGTALPSFVIVLIIAMGFSKFNNNQVVKNMFKGIRPAVVGLIIYAGLDLARHIDWSKFLLCTFLMTVVAIIIFNI
NPVSLILTAIVTGLLVYQRNTGRDDQEEAEATSFKIQES

Sequences:

>Translated_199_residues
MKKSLKNLVKLFFVFLKIGLFTFGGGFAMIPLMEKEIVRKHGWIEKEKFIDAISITQSVPGAVAINLATFFGYNLAGIPG
AIVAATGTALPSFVIVLIIAMGFSKFNNNQVVKNMFKGIRPAVVGLIIYAGLDLARHIDWSKFLLCTFLMTVVAIIIFNI
NPVSLILTAIVTGLLVYQRNTGRDDQEEAEATSFKIQES
>Mature_199_residues
MKKSLKNLVKLFFVFLKIGLFTFGGGFAMIPLMEKEIVRKHGWIEKEKFIDAISITQSVPGAVAINLATFFGYNLAGIPG
AIVAATGTALPSFVIVLIIAMGFSKFNNNQVVKNMFKGIRPAVVGLIIYAGLDLARHIDWSKFLLCTFLMTVVAIIIFNI
NPVSLILTAIVTGLLVYQRNTGRDDQEEAEATSFKIQES

Specific function: Unknown

COG id: COG2059

COG function: function code P; Chromate transport protein ChrA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the chromate ion transporter (CHR) (TC 2.A.51) family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003370 [H]

Pfam domain/function: PF02417 Chromate_transp [H]

EC number: NA

Molecular weight: Translated: 21847; Mature: 21847

Theoretical pI: Translated: 10.13; Mature: 10.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKSLKNLVKLFFVFLKIGLFTFGGGFAMIPLMEKEIVRKHGWIEKEKFIDAISITQSVP
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
GAVAINLATFFGYNLAGIPGAIVAATGTALPSFVIVLIIAMGFSKFNNNQVVKNMFKGIR
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
PAVVGLIIYAGLDLARHIDWSKFLLCTFLMTVVAIIIFNINPVSLILTAIVTGLLVYQRN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
TGRDDQEEAEATSFKIQES
CCCCCHHHHHHHHEEEECC
>Mature Secondary Structure
MKKSLKNLVKLFFVFLKIGLFTFGGGFAMIPLMEKEIVRKHGWIEKEKFIDAISITQSVP
CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCC
GAVAINLATFFGYNLAGIPGAIVAATGTALPSFVIVLIIAMGFSKFNNNQVVKNMFKGIR
CHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHH
PAVVGLIIYAGLDLARHIDWSKFLLCTFLMTVVAIIIFNINPVSLILTAIVTGLLVYQRN
HHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCC
TGRDDQEEAEATSFKIQES
CCCCCHHHHHHHHEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9353933; 9384377 [H]