| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931218
Identifier: 220931218
GI number: 220931218
Start: 384523
End: 385569
Strand: Reverse
Name: 220931218
Synonym: Hore_03710
Alternate gene names: NA
Gene position: 385569-384523 (Counterclockwise)
Preceding gene: 220931219
Following gene: 220931217
Centisome position: 14.96
GC content: 39.83
Gene sequence:
>1047_bases ATGATTAAGCGCCTTACAAACTTATTTCAACAGGATTTAAAAGTGGCAGTGAGGAATTACTTTCATCTTGTTATCATAAT TTTGGCATTGCTAATGGTTGTTGTAGTTAATTTCATTATTCCAGCTGAAGTTAAACTGACCCCAGGTGAAATTTTTCTTG ACAATACACCCGGTAAGCAGGTCCAGAAATACCTGATGTCAGAAGGACTGGATAAAAATCGTTTTGTAAATAATCGTGAA GAATTATTTAAAAGGATTGAAGCTGACAGTAACACCCTGGGGGTTATCCTGGAGGGCACGGTTGACAATGCTACCTTCAC TGTAATCGGCCAGGGACATGAATCCCGGGAGAGCGTAAATTTGCTCAAGGCAGCTCTGGCTTCTATCCTTGATCATATGA AGGGTACTGTGGACAGAACCAATCACAGGGTGGAGCGATTACATCCACAGAGTAAAAAAGTCCCCTTCAATAAACAGATG ATACCTATATTTATTTTCACTGAAGTAATCATGCTGGGTTTTCTCCTGGTTGCAGTTATGGTCTTTCAGGAAAAAAAAGA AGGTGGTGTCAGGGCTTATAGGGTAAGTCCGGGAGGAACCCTTGAATACATTTTGAGTAAAGTAGGTACCAACCTGTTAT TAGCATTATTATTTGCAGTAATACTGATTGTCCTTACCCTGGGGCTAGAGGTTAATTTTATCAGCCTCCTGATTACAATT ATTCTGGCCAATATCTTCATGACTCTGATTGGTTTAACCATTAGTGTCTTTTTCAAAAACCTTGAAGAATTTATATTCGT CGGTATCTTATTTTTATCAATATTTGCCCTACCGATGGTTTCCTATTTAACACCTTCTTTTGCACCACCATTTATAACCT GGATACCCTCTTACCCGGTTCTTTTCGGACTCAGGGAAATATTATTCCCCACCGGCAGGGCAGGTTTTATATCCTCCCTG AACTGGATGCTGGTAGTAGAAAACCTGATAGTTTTAGCAATAAGTTACCTGGCTGTCCACCGAAAACTTATGAGGGAGGA TAAATAG
Upstream 100 bases:
>100_bases TAAACAAATTGATTAATACCAAAAAAATAGAAACAATTCATTCCCAGGAAGCAACCCTGGAACAGATTTTTATCAAACTA ACAGGCAGGGGGCTTTCATA
Downstream 100 bases:
>100_bases ATATGTTTAAGAAAATAATAAACCTGATTAAAAAAGATTTAATAAATGGCCTCAGAAATAACATGGTTATTTATATGTTA TTATTTCCTCTGGTGCTGGC
Product: ABC-2 type transporter
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 348; Mature: 348
Protein sequence:
>348_residues MIKRLTNLFQQDLKVAVRNYFHLVIIILALLMVVVVNFIIPAEVKLTPGEIFLDNTPGKQVQKYLMSEGLDKNRFVNNRE ELFKRIEADSNTLGVILEGTVDNATFTVIGQGHESRESVNLLKAALASILDHMKGTVDRTNHRVERLHPQSKKVPFNKQM IPIFIFTEVIMLGFLLVAVMVFQEKKEGGVRAYRVSPGGTLEYILSKVGTNLLLALLFAVILIVLTLGLEVNFISLLITI ILANIFMTLIGLTISVFFKNLEEFIFVGILFLSIFALPMVSYLTPSFAPPFITWIPSYPVLFGLREILFPTGRAGFISSL NWMLVVENLIVLAISYLAVHRKLMREDK
Sequences:
>Translated_348_residues MIKRLTNLFQQDLKVAVRNYFHLVIIILALLMVVVVNFIIPAEVKLTPGEIFLDNTPGKQVQKYLMSEGLDKNRFVNNRE ELFKRIEADSNTLGVILEGTVDNATFTVIGQGHESRESVNLLKAALASILDHMKGTVDRTNHRVERLHPQSKKVPFNKQM IPIFIFTEVIMLGFLLVAVMVFQEKKEGGVRAYRVSPGGTLEYILSKVGTNLLLALLFAVILIVLTLGLEVNFISLLITI ILANIFMTLIGLTISVFFKNLEEFIFVGILFLSIFALPMVSYLTPSFAPPFITWIPSYPVLFGLREILFPTGRAGFISSL NWMLVVENLIVLAISYLAVHRKLMREDK >Mature_348_residues MIKRLTNLFQQDLKVAVRNYFHLVIIILALLMVVVVNFIIPAEVKLTPGEIFLDNTPGKQVQKYLMSEGLDKNRFVNNRE ELFKRIEADSNTLGVILEGTVDNATFTVIGQGHESRESVNLLKAALASILDHMKGTVDRTNHRVERLHPQSKKVPFNKQM IPIFIFTEVIMLGFLLVAVMVFQEKKEGGVRAYRVSPGGTLEYILSKVGTNLLLALLFAVILIVLTLGLEVNFISLLITI ILANIFMTLIGLTISVFFKNLEEFIFVGILFLSIFALPMVSYLTPSFAPPFITWIPSYPVLFGLREILFPTGRAGFISSL NWMLVVENLIVLAISYLAVHRKLMREDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39241; Mature: 39241
Theoretical pI: Translated: 9.81; Mature: 9.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIKRLTNLFQQDLKVAVRNYFHLVIIILALLMVVVVNFIIPAEVKLTPGEIFLDNTPGKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHH VQKYLMSEGLDKNRFVNNREELFKRIEADSNTLGVILEGTVDNATFTVIGQGHESRESVN HHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHH LLKAALASILDHMKGTVDRTNHRVERLHPQSKKVPFNKQMIPIFIFTEVIMLGFLLVAVM HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VFQEKKEGGVRAYRVSPGGTLEYILSKVGTNLLLALLFAVILIVLTLGLEVNFISLLITI HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILANIFMTLIGLTISVFFKNLEEFIFVGILFLSIFALPMVSYLTPSFAPPFITWIPSYPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHH LFGLREILFPTGRAGFISSLNWMLVVENLIVLAISYLAVHRKLMREDK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MIKRLTNLFQQDLKVAVRNYFHLVIIILALLMVVVVNFIIPAEVKLTPGEIFLDNTPGKQ CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCEEECCCCHHH VQKYLMSEGLDKNRFVNNREELFKRIEADSNTLGVILEGTVDNATFTVIGQGHESRESVN HHHHHHHCCCCCHHCCCCHHHHHHHHHCCCCCEEEEEECCCCCCEEEEEECCCCHHHHHH LLKAALASILDHMKGTVDRTNHRVERLHPQSKKVPFNKQMIPIFIFTEVIMLGFLLVAVM HHHHHHHHHHHHHHCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH VFQEKKEGGVRAYRVSPGGTLEYILSKVGTNLLLALLFAVILIVLTLGLEVNFISLLITI HHHHHHCCCCEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH ILANIFMTLIGLTISVFFKNLEEFIFVGILFLSIFALPMVSYLTPSFAPPFITWIPSYPV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCHH LFGLREILFPTGRAGFISSLNWMLVVENLIVLAISYLAVHRKLMREDK HHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA