| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931212
Identifier: 220931212
GI number: 220931212
Start: 373977
End: 374819
Strand: Direct
Name: 220931212
Synonym: Hore_03640
Alternate gene names: NA
Gene position: 373977-374819 (Clockwise)
Preceding gene: 220931210
Following gene: 220931214
Centisome position: 14.51
GC content: 28.47
Gene sequence:
>843_bases ATGTTATTAAAAGAAATACTGGATATAAGAGGGCTTACTAATTATAAAATTAAACTGGTTAGACATAATGTTAATAGAGA ATATATTAAAAAAATAATGAACAATGGAAACTTTAATTTATATCAATCTGTACATAAAACAAATATATTTAAAGGTTATG ATTATATTATAACTTTTACCAACTTGGAGAGAACAAAAGCATCACTTTATGGGGTATATAAAGTAAAAGGAGTCGAGAAA ATTCAGGAATTACCTGAAGAAATTTGTTTTATTAAAGAACCTGAATCCTGGGATAAAGGTCCTTTTTATAAATATAGAAT AGAAGAAGTTAATTTATTATCTGACCTGAAAAAAAGGCTAGTAATTGACTGGGGGGCGGCTACTCGTTCCTGGCACCAGA AAAAATTAAATAAAGAAGTAATAGAAATATTTCCTGTAGGTTTTGTTAAAACTTTTCCTGGATACCAAAATGTTATTTTA TCTTTTAAAGAACTATCTAGAATAGTAAATAATCCTGATTCAAATAGGGAATGGAAATCAGCTTTATCTAGTGTTTACGG AGTATATCTTATTTTAGATATTACTGATGGAAAGCAGTATGTAGGTTCTGCCTATGGAGAAGAAGGTATTTGGGGTAGGT GGAAATGTTATGTTAAAACAAAACATGGTAATAATAAATTATTAATAGATTTACTTAAATCAGATCCAGATAGATACAAA CATTTTCAGTTCAGCATTTTAGATATTCTTCCTATTACTTCAATGAAAGAAGAGGTTATTAACCTTGAATCAATAACTAA GGAAAAACTGGGCTCAAATGTCTTTGGGCTGAATGCAAATTAG
Upstream 100 bases:
>100_bases TAAATTCATCTTACAGACAATATAAGATATATTTACTAATGAATGTTACTATTAAAAATCTGTTTTTTTAAGCTAATTAA TGTTTTATAAGGAGGTAAAA
Downstream 100 bases:
>100_bases GAACAAAAAGAATTAAAAAGAAGATATAAGGCACTTTTTAAGTTAGGGAAATGTCAATCCCTAACTTTTGATAGGTGTTT TATTATTATTCTTTGTGTAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 280; Mature: 280
Protein sequence:
>280_residues MLLKEILDIRGLTNYKIKLVRHNVNREYIKKIMNNGNFNLYQSVHKTNIFKGYDYIITFTNLERTKASLYGVYKVKGVEK IQELPEEICFIKEPESWDKGPFYKYRIEEVNLLSDLKKRLVIDWGAATRSWHQKKLNKEVIEIFPVGFVKTFPGYQNVIL SFKELSRIVNNPDSNREWKSALSSVYGVYLILDITDGKQYVGSAYGEEGIWGRWKCYVKTKHGNNKLLIDLLKSDPDRYK HFQFSILDILPITSMKEEVINLESITKEKLGSNVFGLNAN
Sequences:
>Translated_280_residues MLLKEILDIRGLTNYKIKLVRHNVNREYIKKIMNNGNFNLYQSVHKTNIFKGYDYIITFTNLERTKASLYGVYKVKGVEK IQELPEEICFIKEPESWDKGPFYKYRIEEVNLLSDLKKRLVIDWGAATRSWHQKKLNKEVIEIFPVGFVKTFPGYQNVIL SFKELSRIVNNPDSNREWKSALSSVYGVYLILDITDGKQYVGSAYGEEGIWGRWKCYVKTKHGNNKLLIDLLKSDPDRYK HFQFSILDILPITSMKEEVINLESITKEKLGSNVFGLNAN >Mature_280_residues MLLKEILDIRGLTNYKIKLVRHNVNREYIKKIMNNGNFNLYQSVHKTNIFKGYDYIITFTNLERTKASLYGVYKVKGVEK IQELPEEICFIKEPESWDKGPFYKYRIEEVNLLSDLKKRLVIDWGAATRSWHQKKLNKEVIEIFPVGFVKTFPGYQNVIL SFKELSRIVNNPDSNREWKSALSSVYGVYLILDITDGKQYVGSAYGEEGIWGRWKCYVKTKHGNNKLLIDLLKSDPDRYK HFQFSILDILPITSMKEEVINLESITKEKLGSNVFGLNAN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32692; Mature: 32692
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLKEILDIRGLTNYKIKLVRHNVNREYIKKIMNNGNFNLYQSVHKTNIFKGYDYIITFT CCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEE NLERTKASLYGVYKVKGVEKIQELPEEICFIKEPESWDKGPFYKYRIEEVNLLSDLKKRL CCHHHHHHHEEEEEECCHHHHHHHHHHHEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHE VIDWGAATRSWHQKKLNKEVIEIFPVGFVKTFPGYQNVILSFKELSRIVNNPDSNREWKS EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ALSSVYGVYLILDITDGKQYVGSAYGEEGIWGRWKCYVKTKHGNNKLLIDLLKSDPDRYK HHHHHCEEEEEEEECCCHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHH HFQFSILDILPITSMKEEVINLESITKEKLGSNVFGLNAN HHEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC >Mature Secondary Structure MLLKEILDIRGLTNYKIKLVRHNVNREYIKKIMNNGNFNLYQSVHKTNIFKGYDYIITFT CCHHHHHHHCCCCCEEEEEEEECCCHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEEEEEE NLERTKASLYGVYKVKGVEKIQELPEEICFIKEPESWDKGPFYKYRIEEVNLLSDLKKRL CCHHHHHHHEEEEEECCHHHHHHHHHHHEEEECCCCCCCCCCEEEEHHHHHHHHHHHHHE VIDWGAATRSWHQKKLNKEVIEIFPVGFVKTFPGYQNVILSFKELSRIVNNPDSNREWKS EEECCCHHHHHHHHHHHHHHHHHHCCHHHHHCCCHHHHHHHHHHHHHHHCCCCCCHHHHH ALSSVYGVYLILDITDGKQYVGSAYGEEGIWGRWKCYVKTKHGNNKLLIDLLKSDPDRYK HHHHHCEEEEEEEECCCHHHHHHHCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCHHHH HFQFSILDILPITSMKEEVINLESITKEKLGSNVFGLNAN HHEEEEEHHHCCCHHHHHHHHHHHHHHHHHCCCCEECCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA