| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220931204
Identifier: 220931204
GI number: 220931204
Start: 367659
End: 368384
Strand: Direct
Name: 220931204
Synonym: Hore_03560
Alternate gene names: NA
Gene position: 367659-368384 (Clockwise)
Preceding gene: 220931203
Following gene: 220931205
Centisome position: 14.26
GC content: 33.2
Gene sequence:
>726_bases ATGATAGATAAAAACATTAAAGATATTACTTTACAGGATATTGTTAATCTTAATATTTATGATGATGTTAATTTTGATGA ATATATAAATGTAATCAGGAAAGAGAAGCCAGGGGCAAAAGATGAATTACTTAAATTGCTAGACCGGGGTAACCAGGTTA TAAAAAAATCTTTTATTGAAGAAGAACTCCAAAAACTAAAAAAGGAGCATAATCAAATCAATCCTGATTTTAATTTAGTA ACTACAGACTATTTTAAAGGGCAAATTGAAAGCTTGATGGTATTAGCAAGCCGAACTGTTGAACCCGGGCCAGAAGAAGT CCAGAGCAAGAAAAATGGCTGGTATTTTAGGGGATATATTACTTTAGGGGAGTTAAAAGAATTACCCAGCATATACCCTT ATTTTAAAAAGGCTTATAGTGAATATAACAGAGATGAGTGGGAATTAGAGCTTAATGTAGTTGGAGGCATTATCCAGGGT TACCCGGCGGTAGATGAAGAGACAATTAATTCCTGGAGAGATGAAGGGGTGTTAATGGAGCTATGGGGATTTGATAAAGG CAATAAAATGACGTCATTAACAGATATAATGGTTAATAGTTTATTGAAGTTAAAGAAACAGGCCCAGAAAATAAGAGAAA AAGGCAAGCCGGATAACTTGCATGAGGCCAGGATACTAAAGCTAGATAATGAAGGAAAGAAATTATTTAGTCATATATTT TATTAA
Upstream 100 bases:
>100_bases ACCGGGAAATTATTAGGGAAAACTTGAAGAGAGAATGTTTACTTGATGGTATTGTTATTATTCAGAGCTTAAAAGAGATA ATCAGGGGTGAAGATTAAAA
Downstream 100 bases:
>100_bases TACTGCCGGGGGTGTTTGACCCTTGAAGACAGATGTAACAACAGAGTTATTAAAATTATATTTTACCGGAGAGTTATCAA ATATTATTAAAAGGTTGAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 241; Mature: 241
Protein sequence:
>241_residues MIDKNIKDITLQDIVNLNIYDDVNFDEYINVIRKEKPGAKDELLKLLDRGNQVIKKSFIEEELQKLKKEHNQINPDFNLV TTDYFKGQIESLMVLASRTVEPGPEEVQSKKNGWYFRGYITLGELKELPSIYPYFKKAYSEYNRDEWELELNVVGGIIQG YPAVDEETINSWRDEGVLMELWGFDKGNKMTSLTDIMVNSLLKLKKQAQKIREKGKPDNLHEARILKLDNEGKKLFSHIF Y
Sequences:
>Translated_241_residues MIDKNIKDITLQDIVNLNIYDDVNFDEYINVIRKEKPGAKDELLKLLDRGNQVIKKSFIEEELQKLKKEHNQINPDFNLV TTDYFKGQIESLMVLASRTVEPGPEEVQSKKNGWYFRGYITLGELKELPSIYPYFKKAYSEYNRDEWELELNVVGGIIQG YPAVDEETINSWRDEGVLMELWGFDKGNKMTSLTDIMVNSLLKLKKQAQKIREKGKPDNLHEARILKLDNEGKKLFSHIF Y >Mature_241_residues MIDKNIKDITLQDIVNLNIYDDVNFDEYINVIRKEKPGAKDELLKLLDRGNQVIKKSFIEEELQKLKKEHNQINPDFNLV TTDYFKGQIESLMVLASRTVEPGPEEVQSKKNGWYFRGYITLGELKELPSIYPYFKKAYSEYNRDEWELELNVVGGIIQG YPAVDEETINSWRDEGVLMELWGFDKGNKMTSLTDIMVNSLLKLKKQAQKIREKGKPDNLHEARILKLDNEGKKLFSHIF Y
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 28170; Mature: 28170
Theoretical pI: Translated: 5.28; Mature: 5.28
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIDKNIKDITLQDIVNLNIYDDVNFDEYINVIRKEKPGAKDELLKLLDRGNQVIKKSFIE CCCCCCHHEEHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH EELQKLKKEHNQINPDFNLVTTDYFKGQIESLMVLASRTVEPGPEEVQSKKNGWYFRGYI HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE TLGELKELPSIYPYFKKAYSEYNRDEWELELNVVGGIIQGYPAVDEETINSWRDEGVLME EHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHCCCEEEE LWGFDKGNKMTSLTDIMVNSLLKLKKQAQKIREKGKPDNLHEARILKLDNEGKKLFSHIF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHC Y C >Mature Secondary Structure MIDKNIKDITLQDIVNLNIYDDVNFDEYINVIRKEKPGAKDELLKLLDRGNQVIKKSFIE CCCCCCHHEEHHHHHCCCEECCCCHHHHHHHHHHCCCCCHHHHHHHHHCCHHHHHHHHHH EELQKLKKEHNQINPDFNLVTTDYFKGQIESLMVLASRTVEPGPEEVQSKKNGWYFRGYI HHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHCCCCCHHHHHHCCCCEEEEEEE TLGELKELPSIYPYFKKAYSEYNRDEWELELNVVGGIIQGYPAVDEETINSWRDEGVLME EHHHHHHCCHHHHHHHHHHHHCCCCCEEEEEEEHHHHHHCCCCCCHHHHHHHHCCCEEEE LWGFDKGNKMTSLTDIMVNSLLKLKKQAQKIREKGKPDNLHEARILKLDNEGKKLFSHIF EECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCHHHHHHHHHC Y C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA