Definition Halothermothrix orenii H 168 chromosome, complete genome.
Accession NC_011899
Length 2,578,146

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The map label for this gene is 220931193

Identifier: 220931193

GI number: 220931193

Start: 359557

End: 360426

Strand: Reverse

Name: 220931193

Synonym: Hore_03450

Alternate gene names: NA

Gene position: 360426-359557 (Counterclockwise)

Preceding gene: 220931206

Following gene: 220931191

Centisome position: 13.98

GC content: 23.91

Gene sequence:

>870_bases
ATGACAAATACACCTGTTAACATTAATGATTTAAACATTAAAAAATTAGGTAATTCTCTGGAAATTTCTGTTTTCCCTGT
GAAGTTTAAGAATTATAAGGTGAAGAAAATTAAAAATAAGGAATACATTATAGGTAAAGGAATGCAGTTAAAAGATGAAG
ATCTAATAAATGCTTTTGAGGGTAAAAATCCAATGAATAATTTTAAACTATTATTATCTTTGATTAATTTAGTAAAAAAA
TCTTTACCAGATAAAAATAAAAATGAATGGGACCCGGACAAAATAAAAAAAGCCATTCCTTTAAAAAATATAAAAGAATG
GATAAATAAATATGGTTTGCCTTATATAGGAAAAATAGACTTTGCAAAAACAAATCATACTAGAAAAAAAATAAATAATA
TGCTTACTTTTGGTGTTAATATCAATGATTTTCGTTCTAAAATTGCTGGTCTTTACAGTTTTTATAAATTATGGTTTGCT
ATTAAGACTAAAGATAAAAAAATAATTAATAAATTTAAAGCCAATTACTCAATACCTGGGAAAAATATTGAAGAAACATT
AACATATTACATTGATAATAGTTTTGATAACAATTTTAAAATTAAACCAGCTTTTGATAAAGATGATAAAACTTTTAAGT
TACAAATTTATACTCATAACAACCAGCTAAATGCTGCACTTTTTCAACTTTATAATTTAATGACTCTTGATGATATATCT
ACAGATGAAAATGGAAATTCACAATTTCAACATCTTAAAGAATGTAATTATTGTAAAAATATTTTCTGGGCTAAAGATAG
TAAAGGGAAATACTGCAGTCCTCGTTGTCGTAAAAATGCCTGGTATCATAAAAATAAGAATACTAAATAA

Upstream 100 bases:

>100_bases
TTGACTAATTAAATTATATCTGCTATACTAGACTTATACAATATAAATTGCGTCTAAATATCCGTCAGTCAGATATATTT
TTTTAAAAGGAGATGGTTTT

Downstream 100 bases:

>100_bases
AAAAATATACTAAAATCCCCCGTTAATTGTCATCTTCAGTAAATACAATTCTATCTTTAGATATAACCAGGTTTCCTTCT
ACTACCCTCAATTTGTGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 289; Mature: 288

Protein sequence:

>289_residues
MTNTPVNINDLNIKKLGNSLEISVFPVKFKNYKVKKIKNKEYIIGKGMQLKDEDLINAFEGKNPMNNFKLLLSLINLVKK
SLPDKNKNEWDPDKIKKAIPLKNIKEWINKYGLPYIGKIDFAKTNHTRKKINNMLTFGVNINDFRSKIAGLYSFYKLWFA
IKTKDKKIINKFKANYSIPGKNIEETLTYYIDNSFDNNFKIKPAFDKDDKTFKLQIYTHNNQLNAALFQLYNLMTLDDIS
TDENGNSQFQHLKECNYCKNIFWAKDSKGKYCSPRCRKNAWYHKNKNTK

Sequences:

>Translated_289_residues
MTNTPVNINDLNIKKLGNSLEISVFPVKFKNYKVKKIKNKEYIIGKGMQLKDEDLINAFEGKNPMNNFKLLLSLINLVKK
SLPDKNKNEWDPDKIKKAIPLKNIKEWINKYGLPYIGKIDFAKTNHTRKKINNMLTFGVNINDFRSKIAGLYSFYKLWFA
IKTKDKKIINKFKANYSIPGKNIEETLTYYIDNSFDNNFKIKPAFDKDDKTFKLQIYTHNNQLNAALFQLYNLMTLDDIS
TDENGNSQFQHLKECNYCKNIFWAKDSKGKYCSPRCRKNAWYHKNKNTK
>Mature_288_residues
TNTPVNINDLNIKKLGNSLEISVFPVKFKNYKVKKIKNKEYIIGKGMQLKDEDLINAFEGKNPMNNFKLLLSLINLVKKS
LPDKNKNEWDPDKIKKAIPLKNIKEWINKYGLPYIGKIDFAKTNHTRKKINNMLTFGVNINDFRSKIAGLYSFYKLWFAI
KTKDKKIINKFKANYSIPGKNIEETLTYYIDNSFDNNFKIKPAFDKDDKTFKLQIYTHNNQLNAALFQLYNLMTLDDIST
DENGNSQFQHLKECNYCKNIFWAKDSKGKYCSPRCRKNAWYHKNKNTK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33960; Mature: 33828

Theoretical pI: Translated: 10.32; Mature: 10.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTNTPVNINDLNIKKLGNSLEISVFPVKFKNYKVKKIKNKEYIIGKGMQLKDEDLINAFE
CCCCCCCCCCCCHHHCCCEEEEEEEEEEECCEEEEEECCCCEEEECCCCCCHHHHHHHHC
GKNPMNNFKLLLSLINLVKKSLPDKNKNEWDPDKIKKAIPLKNIKEWINKYGLPYIGKID
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEECEEE
FAKTNHTRKKINNMLTFGVNINDFRSKIAGLYSFYKLWFAIKTKDKKIINKFKANYSIPG
CCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC
KNIEETLTYYIDNSFDNNFKIKPAFDKDDKTFKLQIYTHNNQLNAALFQLYNLMTLDDIS
CCHHHHHEEEEECCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCC
TDENGNSQFQHLKECNYCKNIFWAKDSKGKYCSPRCRKNAWYHKNKNTK
CCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHCCCCCCCCCCCC
>Mature Secondary Structure 
TNTPVNINDLNIKKLGNSLEISVFPVKFKNYKVKKIKNKEYIIGKGMQLKDEDLINAFE
CCCCCCCCCCCHHHCCCEEEEEEEEEEECCEEEEEECCCCEEEECCCCCCHHHHHHHHC
GKNPMNNFKLLLSLINLVKKSLPDKNKNEWDPDKIKKAIPLKNIKEWINKYGLPYIGKID
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCHHHHHHHHHHCCCCEECEEE
FAKTNHTRKKINNMLTFGVNINDFRSKIAGLYSFYKLWFAIKTKDKKIINKFKANYSIPG
CCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHEECCCHHHHHHHHCCCCCCC
KNIEETLTYYIDNSFDNNFKIKPAFDKDDKTFKLQIYTHNNQLNAALFQLYNLMTLDDIS
CCHHHHHEEEEECCCCCCEEEEECCCCCCCEEEEEEEEECCCHHHHHHHHHHHHHCCCCC
TDENGNSQFQHLKECNYCKNIFWAKDSKGKYCSPRCRKNAWYHKNKNTK
CCCCCCHHHHHHHHHHHHHHCEECCCCCCCCCCCHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA