Click here to switch to the map view.

The map label for this gene is 220931182

Identifier: 220931182

GI number: 220931182

Start: 344409

End: 345728

Strand: Direct

Name: 220931182

Synonym: Hore_03340

Alternate gene names: NA

Gene position: 344409-345728 (Clockwise)

Preceding gene: 220931181

Following gene: 220931183

Centisome position: 13.36

GC content: 36.82

Gene sequence:

>1320_bases
TTGGTTAAAAAAACTTTTCTATTAATGCTGGTTGCTTTGTTTTTAGTTTCGTTGACAGCTGTAGTAGGTGCTGCTGAATT
TGATTGGAAGCGTTTTGAAGGTGAAACAATTAAGTTATTACTTAACAAGCACCCTTATACAGACGGTGTTTTAAAAGAAT
TAGACAAATTTGAAAAAATGACCGGGATAAATGTGGAATATGATATTTTACCAGAGGAACAGTATTTTAATAAAGTCACT
GTTACCCTATCTTCAGGTTCCAGTGAATATGATATTTTCATGACAGGTGCTTATCAGGTTTGGCAGTATGCACCTCCAGG
ATGGATGGAACCTTTAGATAAATATATTGAAGATAATAGTTTAACCAGTCCAGATTGGGATAAAAATGATTTTATTCCCG
GTATTATTAATTCCTTGAAATGGAACCTTCAACCGGGAAGTGAACTTGGAACCGGTAAGCAATGGGCTTTACCACTAGGT
TGGGAAGAAAATTGTTTAGTTTATAGAAAAGATATTTTTGAAAAATATAACCTAAAAGTTCCTGAAACTTTAGATGAAGT
AATTGAAGTAGGAAAAATAATAGAAGAAAAGACTGACCTTACAGGTATAGTAGTTAGGGGAACCCGTAGCTGGGCTACGA
TTCACCCTGGATTTTACTCTGGTCTGGTTGCTTCTGGTGGTTTTGATTATGATGGTAATCTAAAACCACAGATGAATAGT
GAAGTAGCCCTTGAGTTTACAAAAAAATGGGTAGAAATGATTAAGGAAGTGGGTCCCGAACAATGGACCACCTATACCTG
GTATGATGTTTCTAATGCACTTGGGTCTGGTAAAGCAGCTATGATGTATGATGCTGATACTCTTGGCTTCTGGGCTGACC
ACGCTGATGAAAGATTAGCATGGGCCCCTGGTCCTGGTTTAAATAAAAAAGCTGATAAAACAAATGTCTGGATCTGGTCT
CTGGCTATGAGTGCCCATTCAAATTCAAAAGAACCAGCATGGTACTTCTTACAATGGGTAACCGGTAAAGAATTCCTGAC
TACTGCTGCTGTAAAACACGATGGATTAAACCCGGTACGCAAATCCATCTGGGAAAATCCAGATTTTAAAGAAAGGTTAG
CTAAGTTTGATGGTTATTATAAAACCTATAAAAAAATTGATGAAGCTGCAGTTCAATTTACACCTCAACCGATGTTCTTC
CAGACTACAACTGAATGGGCAGCGGCTCTGCAGAAAATAGTAAATGGTGAAGATGCTGAAGAAGTATTAAATAAATTAGT
AGAAGATTTAGATAAGAAAATGGAGTCAATTAGACGTTAA

Upstream 100 bases:

>100_bases
AGTAGAAATTGCAATCTAAGGAGGTGGTTTCCTGGATAAACAGTAAAAATTACTGGTCAGAAGTATTGTTTAGTAAAAAA
AACCAAGGGGGTAAATTTAG

Downstream 100 bases:

>100_bases
ATATTATTCTACAAAAATATATTTTACGAAGAGATGGGGAGATTTTATCTCCCCTTTTTTTTATTATAATTTTAGAAAAA
TATTTGTAAATTTTTATTTA

Product: family 1 extracellular solute-binding protein

Products: NA

Alternate protein names: Sugar ABC Transporter Periplasmic Component; ABC-Type Sugar Transport System Periplasmic Component; ABC Sugar Transporter; Sugar ABC Transporter; Transporter-Like Exported Protein; ABC Transporter For Sugars; Sorbitol/Mannitol ABC Transporter

Number of amino acids: Translated: 439; Mature: 439

Protein sequence:

>439_residues
MVKKTFLLMLVALFLVSLTAVVGAAEFDWKRFEGETIKLLLNKHPYTDGVLKELDKFEKMTGINVEYDILPEEQYFNKVT
VTLSSGSSEYDIFMTGAYQVWQYAPPGWMEPLDKYIEDNSLTSPDWDKNDFIPGIINSLKWNLQPGSELGTGKQWALPLG
WEENCLVYRKDIFEKYNLKVPETLDEVIEVGKIIEEKTDLTGIVVRGTRSWATIHPGFYSGLVASGGFDYDGNLKPQMNS
EVALEFTKKWVEMIKEVGPEQWTTYTWYDVSNALGSGKAAMMYDADTLGFWADHADERLAWAPGPGLNKKADKTNVWIWS
LAMSAHSNSKEPAWYFLQWVTGKEFLTTAAVKHDGLNPVRKSIWENPDFKERLAKFDGYYKTYKKIDEAAVQFTPQPMFF
QTTTEWAAALQKIVNGEDAEEVLNKLVEDLDKKMESIRR

Sequences:

>Translated_439_residues
MVKKTFLLMLVALFLVSLTAVVGAAEFDWKRFEGETIKLLLNKHPYTDGVLKELDKFEKMTGINVEYDILPEEQYFNKVT
VTLSSGSSEYDIFMTGAYQVWQYAPPGWMEPLDKYIEDNSLTSPDWDKNDFIPGIINSLKWNLQPGSELGTGKQWALPLG
WEENCLVYRKDIFEKYNLKVPETLDEVIEVGKIIEEKTDLTGIVVRGTRSWATIHPGFYSGLVASGGFDYDGNLKPQMNS
EVALEFTKKWVEMIKEVGPEQWTTYTWYDVSNALGSGKAAMMYDADTLGFWADHADERLAWAPGPGLNKKADKTNVWIWS
LAMSAHSNSKEPAWYFLQWVTGKEFLTTAAVKHDGLNPVRKSIWENPDFKERLAKFDGYYKTYKKIDEAAVQFTPQPMFF
QTTTEWAAALQKIVNGEDAEEVLNKLVEDLDKKMESIRR
>Mature_439_residues
MVKKTFLLMLVALFLVSLTAVVGAAEFDWKRFEGETIKLLLNKHPYTDGVLKELDKFEKMTGINVEYDILPEEQYFNKVT
VTLSSGSSEYDIFMTGAYQVWQYAPPGWMEPLDKYIEDNSLTSPDWDKNDFIPGIINSLKWNLQPGSELGTGKQWALPLG
WEENCLVYRKDIFEKYNLKVPETLDEVIEVGKIIEEKTDLTGIVVRGTRSWATIHPGFYSGLVASGGFDYDGNLKPQMNS
EVALEFTKKWVEMIKEVGPEQWTTYTWYDVSNALGSGKAAMMYDADTLGFWADHADERLAWAPGPGLNKKADKTNVWIWS
LAMSAHSNSKEPAWYFLQWVTGKEFLTTAAVKHDGLNPVRKSIWENPDFKERLAKFDGYYKTYKKIDEAAVQFTPQPMFF
QTTTEWAAALQKIVNGEDAEEVLNKLVEDLDKKMESIRR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 50192; Mature: 50192

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKKTFLLMLVALFLVSLTAVVGAAEFDWKRFEGETIKLLLNKHPYTDGVLKELDKFEKM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
TGINVEYDILPEEQYFNKVTVTLSSGSSEYDIFMTGAYQVWQYAPPGWMEPLDKYIEDNS
CCCCEEEEECCCHHHCCEEEEEEECCCCCEEEEEECHHHHEECCCCCHHHHHHHHHCCCC
LTSPDWDKNDFIPGIINSLKWNLQPGSELGTGKQWALPLGWEENCLVYRKDIFEKYNLKV
CCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHCCCCC
PETLDEVIEVGKIIEEKTDLTGIVVRGTRSWATIHPGFYSGLVASGGFDYDGNLKPQMNS
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCC
EVALEFTKKWVEMIKEVGPEQWTTYTWYDVSNALGSGKAAMMYDADTLGFWADHADERLA
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCEEEEECCCHHCHHHCCCCCCEE
WAPGPGLNKKADKTNVWIWSLAMSAHSNSKEPAWYFLQWVTGKEFLTTAAVKHDGLNPVR
ECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHH
KSIWENPDFKERLAKFDGYYKTYKKIDEAAVQFTPQPMFFQTTTEWAAALQKIVNGEDAE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHCCCCHH
EVLNKLVEDLDKKMESIRR
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MVKKTFLLMLVALFLVSLTAVVGAAEFDWKRFEGETIKLLLNKHPYTDGVLKELDKFEKM
CCHHHHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCEEEEEECCCCCCCHHHHHHHHHHHH
TGINVEYDILPEEQYFNKVTVTLSSGSSEYDIFMTGAYQVWQYAPPGWMEPLDKYIEDNS
CCCCEEEEECCCHHHCCEEEEEEECCCCCEEEEEECHHHHEECCCCCHHHHHHHHHCCCC
LTSPDWDKNDFIPGIINSLKWNLQPGSELGTGKQWALPLGWEENCLVYRKDIFEKYNLKV
CCCCCCCCCCCCHHHHHHHEECCCCCCCCCCCCCEEECCCCCCCCEEEHHHHHHHCCCCC
PETLDEVIEVGKIIEEKTDLTGIVVRGTRSWATIHPGFYSGLVASGGFDYDGNLKPQMNS
CHHHHHHHHHHHHHHHCCCCEEEEEECCCCCEEECCCHHHHHHHCCCCCCCCCCCCCCCC
EVALEFTKKWVEMIKEVGPEQWTTYTWYDVSNALGSGKAAMMYDADTLGFWADHADERLA
HHHHHHHHHHHHHHHHCCCCCCCEEEEEECHHHCCCCCEEEEECCCHHCHHHCCCCCCEE
WAPGPGLNKKADKTNVWIWSLAMSAHSNSKEPAWYFLQWVTGKEFLTTAAVKHDGLNPVR
ECCCCCCCCCCCCCCEEEEEEEEHHCCCCCCCCEEEEEECCCHHHHHHHHHHCCCCCHHH
KSIWENPDFKERLAKFDGYYKTYKKIDEAAVQFTPQPMFFQTTTEWAAALQKIVNGEDAE
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCCEEEECHHHHHHHHHHHHCCCCHH
EVLNKLVEDLDKKMESIRR
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA