| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is yebN [C]
Identifier: 220931108
GI number: 220931108
Start: 266265
End: 266849
Strand: Reverse
Name: yebN [C]
Synonym: Hore_02600
Alternate gene names: 220931108
Gene position: 266849-266265 (Counterclockwise)
Preceding gene: 220931116
Following gene: 220931099
Centisome position: 10.35
GC content: 37.61
Gene sequence:
>585_bases ATGACCCTGTTAACCCTTTTTTTTACTGCATTTGGACTTGCTATGGATGCCTTTTCAGTTTCAGTTACCAGTGGTATCAT CTTAAACCAAATCAGATTTAAAAATGCTATTAAAATTGGGTTCTTTTTCGGGTTTTTTCAGGCCTTTATGCCTCTTGTCG GTTGGTTTTGCAGCCTGAAATTTAGTAACTATATAAAAAGCTATGACCACTGGGTAGCCTTCATTCTGCTTTTAATTATC GGTTTAAAAATGATCTATGAAACAACCACTGATGAAGATAATAACTTTAACCCTTTAAATAACAAAATACTTCTTTTACT GGCTATCGCCACCAGTATAGATGCCCTGGCAGTCGGGGTCAGTTTTGCCTGCCTTAAGGTAGCTATCCTCCCCTCAGTTA TGATAATCGGATGGACAACTTTCATCCTATCTGCCCCGGGGGTTTTTATTGGAAAAACCGGTGGTAACCTTCTCCAGAAT AAGGCTCAGATTATCGGTGGACTAATACTGATCTTTATCGGAACCAGGATCCTGTTTGAACACCTCAATATAAATATTGT TAGTATATTAAACTTTATACCTTAA
Upstream 100 bases:
>100_bases ACATTGACATTACATACAAAAGACATTATAATACAGTTGTTGTCACCCACTACGAAAACCTGAACCCGCATATATTATAC CTACTTAAAGGAGTAATACC
Downstream 100 bases:
>100_bases TTTAAGTCTATTAACCGGATCATGTTTTTTATCCCTTCATACTCCCATCGAAAGTTATTTTTATTAACACCGGGGATATA ATAGATAAGAAATTTGTTCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 194; Mature: 193
Protein sequence:
>194_residues MTLLTLFFTAFGLAMDAFSVSVTSGIILNQIRFKNAIKIGFFFGFFQAFMPLVGWFCSLKFSNYIKSYDHWVAFILLLII GLKMIYETTTDEDNNFNPLNNKILLLLAIATSIDALAVGVSFACLKVAILPSVMIIGWTTFILSAPGVFIGKTGGNLLQN KAQIIGGLILIFIGTRILFEHLNINIVSILNFIP
Sequences:
>Translated_194_residues MTLLTLFFTAFGLAMDAFSVSVTSGIILNQIRFKNAIKIGFFFGFFQAFMPLVGWFCSLKFSNYIKSYDHWVAFILLLII GLKMIYETTTDEDNNFNPLNNKILLLLAIATSIDALAVGVSFACLKVAILPSVMIIGWTTFILSAPGVFIGKTGGNLLQN KAQIIGGLILIFIGTRILFEHLNINIVSILNFIP >Mature_193_residues TLLTLFFTAFGLAMDAFSVSVTSGIILNQIRFKNAIKIGFFFGFFQAFMPLVGWFCSLKFSNYIKSYDHWVAFILLLIIG LKMIYETTTDEDNNFNPLNNKILLLLAIATSIDALAVGVSFACLKVAILPSVMIIGWTTFILSAPGVFIGKTGGNLLQNK AQIIGGLILIFIGTRILFEHLNINIVSILNFIP
Specific function: Unknown
COG id: COG1971
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0059 family [H]
Homologues:
Organism=Escherichia coli, GI87081981, Length=178, Percent_Identity=38.7640449438202, Blast_Score=137, Evalue=6e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003810 - InterPro: IPR022929 [H]
Pfam domain/function: PF02659 DUF204 [H]
EC number: NA
Molecular weight: Translated: 21441; Mature: 21310
Theoretical pI: Translated: 9.19; Mature: 9.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLLTLFFTAFGLAMDAFSVSVTSGIILNQIRFKNAIKIGFFFGFFQAFMPLVGWFCSLK CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSNYIKSYDHWVAFILLLIIGLKMIYETTTDEDNNFNPLNNKILLLLAIATSIDALAVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SFACLKVAILPSVMIIGWTTFILSAPGVFIGKTGGNLLQNKAQIIGGLILIFIGTRILFE HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLNINIVSILNFIP HHCCHHHHHHHHCC >Mature Secondary Structure TLLTLFFTAFGLAMDAFSVSVTSGIILNQIRFKNAIKIGFFFGFFQAFMPLVGWFCSLK HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH FSNYIKSYDHWVAFILLLIIGLKMIYETTTDEDNNFNPLNNKILLLLAIATSIDALAVGV HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH SFACLKVAILPSVMIIGWTTFILSAPGVFIGKTGGNLLQNKAQIIGGLILIFIGTRILFE HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHH HLNINIVSILNFIP HHCCHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA