Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 220931080

GI number: 220931080

Start: 238779

End: 239066

Strand: Direct

Name: gatC

Synonym: Hore_02320

Alternate gene names: 220931080

Gene position: 238779-239066 (Clockwise)

Preceding gene: 220931079

Following gene: 220931081

Centisome position: 9.26

GC content: 39.24

Gene sequence:

>288_bases
ATGATTAAGAAAGAAGAAGTGGAGAAAATAGCTGGACTTGCCTATCTTAAATTATCAGATGAAGAAAGAGAGACTTTTAC
CAGGCAACTCGGTGATATTTTAGACTATGTAGAAAAACTAAATGAGCTTGATACTGATGGGGTTGTACCTACTGCTTATA
CTGTGCCCATGAAGAATGTCCTCAGAGATGATAAAGTAGGTTCATCAATTCCCAGGGAAGAGGCACTTGATAATGCGCCC
GACAAAAAGGATGGTCTGTTCAGAGTACCCAGTATCATAGGTGAATAA

Upstream 100 bases:

>100_bases
CGTTAAACTCCCTCAGTCAGACAAAAAATTGGGAACCAATAATTAATATATATTTAGTTAGACATTTATGTAAATAACAA
TAAAAAGGGGTGAAAAAGAG

Downstream 100 bases:

>100_bases
AAAGGAGGTTATGTAAATGGAATTATATGATCTTACAATCCATGAGTTGCGGGATCTGCTGAGGAAAGAAGAAGTTTCCC
CGGAAGAAGTTTTAGATAGT

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 95; Mature: 95

Protein sequence:

>95_residues
MIKKEEVEKIAGLAYLKLSDEERETFTRQLGDILDYVEKLNELDTDGVVPTAYTVPMKNVLRDDKVGSSIPREEALDNAP
DKKDGLFRVPSIIGE

Sequences:

>Translated_95_residues
MIKKEEVEKIAGLAYLKLSDEERETFTRQLGDILDYVEKLNELDTDGVVPTAYTVPMKNVLRDDKVGSSIPREEALDNAP
DKKDGLFRVPSIIGE
>Mature_95_residues
MIKKEEVEKIAGLAYLKLSDEERETFTRQLGDILDYVEKLNELDTDGVVPTAYTVPMKNVLRDDKVGSSIPREEALDNAP
DKKDGLFRVPSIIGE

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_HALOH (B8D124)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002507988.1
- ProteinModelPortal:   B8D124
- SMR:   B8D124
- GeneID:   7312552
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_02320
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10681; Mature: 10681

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKKEEVEKIAGLAYLKLSDEERETFTRQLGDILDYVEKLNELDTDGVVPTAYTVPMKNV
CCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHH
LRDDKVGSSIPREEALDNAPDKKDGLFRVPSIIGE
HHHHCCCCCCCHHHHHCCCCCCCCCCEECHHHHCC
>Mature Secondary Structure
MIKKEEVEKIAGLAYLKLSDEERETFTRQLGDILDYVEKLNELDTDGVVPTAYTVPMKNV
CCCHHHHHHHHHHHHEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHCCHHHH
LRDDKVGSSIPREEALDNAPDKKDGLFRVPSIIGE
HHHHCCCCCCCHHHHHCCCCCCCCCCEECHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA