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The map label for this gene is 220931054

Identifier: 220931054

GI number: 220931054

Start: 211497

End: 213212

Strand: Direct

Name: 220931054

Synonym: Hore_02060

Alternate gene names: NA

Gene position: 211497-213212 (Clockwise)

Preceding gene: 220931053

Following gene: 220931055

Centisome position: 8.2

GC content: 42.25

Gene sequence:

>1716_bases
ATGGGTCTGGTAATAACAAGTGAGGCTAAATGCAGAGATTGTTATAAGTGTATACGGTATTGCCCGGTTAAAGCTATTGG
GATCAAGGATGGGCAGGCCTGGGTAGATGAAGACAGGTGTATTCTGTGTGGCCGTTGTATTGAAGCCTGTCCCCAGAATG
CTAAAAAAACTGAACAATATCTTGATAAATTTAAAAACTATATAGCCTCCGGTAATAAAGTAGTTGTTAGCCTGGCTCCC
TCGTATCTGGCTTCAGGTTATTTCTCTACCCCCTGGAAGTTGGTAGGGGCTTTAAAAGAACTTGGTGTAGATGTTGTTGA
AGAAACAGCGATTGGGGCAGAAGTTATCGCCGATGAGTACAGAGATTTACTCAATAAAAAGGAACTAATTATATCCAGCT
GTTGCCCAACTGTTGTAAACCTGGTTGAAAAATATTTTCCAGGATTATGTGATTATCTGGCACCTGTTATATCACCGATG
ATAGCCCACGGAAGACTGATAAAACAGGAAATGGGTGAAAACTGCCGGGTTGTATTTATCGGCCCCTGTTATGCGAAAAA
AGAAGAAGCGTTGACCCGGGGTGAAGGGTCAATTGATGCTGTTTTGACCTTTGAGGAAATATTTAATTACTTAGATAGAC
TAAATCAGGATATACCTCCCCGTAATATTTTTCCTGACAGAACCTCTAACAGGGCCCGCCGTTTTCCACTTCCCGGCGGG
GCCCTTAGAACAGGTGGGCTAAATGAATTAAATATAAAGCCAGATGATATTGTGTCAATATCAGGACTTGAAGATTGTAT
GGAAACCTTCCGTGATATTGAAAAAGGTCTTATCAAGCCCAGATTTATCGAGGCAATGGCCTGCCGGGGGGGTTGCCTCG
GGGGGCCAGCCATGGGTGAAGATGCTGGAATCCTGGCCAGGAAACAAAGGTTATACAATAATTTAAACAGGGGACAGCAG
AGCTGTCGGGGGGCTAACAATAAAGGTATTATAGTTTCCTGGAGCTACACTCCCAGAGAGATAGATTATAAAGTTCCAGA
TGAAGAAGAAATAAAGAGAATTCTGGCATTGACCGGTAAAACATCACCTGAAGATGAAACAAACTGTGGTGGCTGTGGTT
ATCCCAGTTGCCGGGATAAGGCAATTGCTGTGTATAATGGTCTGGCCAATCCGGAAATGTGTATTCCCTATATGAGGGAA
AAGGCTGAATCCTTATCCCATGCTGTTGTTGATAGTACTCTTAATGGAATTATTATTGTTGATAAAGATATGATTATTCA
GGATTTTAATCCGGCTGCAAACCGGATGTTTAACCGCAGAGATATTAAGGCTAAAGGTAAACCATTGAGCACTTTTATTG
ATCCCGGGGATTACATTGATGTCTGGGAGAATCAGGAGATGATAACTGATAATTGTAAGCAATATCCCCAGTATGAGTTG
ATTACCAGGGAAACTATTTATCCCCTCCCTAAATATGGAGTTGTCATCGGTATAATTACAGATGTTACTGAAGAGGAAAA
GACCAGGGCCGAAATTGATAATATGAGACAGGAAGCTTTAGACAGGGCCTCTCAGGTAATTAAAGAACAGATGCGGGTTG
CCCAGGAAATTGCAGGACTTCTTGGTGAGAGTACGGCAGATACTAAAGCAACACTACTCGAACTAAAAGAGATTATAGGG
CAAAGAGAGGCGAAGACAAATGGGGATGAAAGTTGA

Upstream 100 bases:

>100_bases
AGGGGTTGTAGTTAAATTCGATGATGAGATTGTGACTAAAATCACAAAAGATAATATAATTGATGTTCTCGAAGAGAAGT
TAAGTTGTGGGGGATGAGAT

Downstream 100 bases:

>100_bases
TGTTGGAGTTGCCAGCCTTTCAAAACACGGTGAAGAGGTCTGTGGTGATAGTTATCAGGTCATCAGGTCTAGGGATGCGA
CAACAGTAATTTTATCTGAT

Product: putative PAS/PAC sensor protein

Products: NA

Alternate protein names: CpI; Fe-only hydrogenase; [Fe] hydrogenase [H]

Number of amino acids: Translated: 571; Mature: 570

Protein sequence:

>571_residues
MGLVITSEAKCRDCYKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNAKKTEQYLDKFKNYIASGNKVVVSLAP
SYLASGYFSTPWKLVGALKELGVDVVEETAIGAEVIADEYRDLLNKKELIISSCCPTVVNLVEKYFPGLCDYLAPVISPM
IAHGRLIKQEMGENCRVVFIGPCYAKKEEALTRGEGSIDAVLTFEEIFNYLDRLNQDIPPRNIFPDRTSNRARRFPLPGG
ALRTGGLNELNIKPDDIVSISGLEDCMETFRDIEKGLIKPRFIEAMACRGGCLGGPAMGEDAGILARKQRLYNNLNRGQQ
SCRGANNKGIIVSWSYTPREIDYKVPDEEEIKRILALTGKTSPEDETNCGGCGYPSCRDKAIAVYNGLANPEMCIPYMRE
KAESLSHAVVDSTLNGIIIVDKDMIIQDFNPAANRMFNRRDIKAKGKPLSTFIDPGDYIDVWENQEMITDNCKQYPQYEL
ITRETIYPLPKYGVVIGIITDVTEEEKTRAEIDNMRQEALDRASQVIKEQMRVAQEIAGLLGESTADTKATLLELKEIIG
QREAKTNGDES

Sequences:

>Translated_571_residues
MGLVITSEAKCRDCYKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNAKKTEQYLDKFKNYIASGNKVVVSLAP
SYLASGYFSTPWKLVGALKELGVDVVEETAIGAEVIADEYRDLLNKKELIISSCCPTVVNLVEKYFPGLCDYLAPVISPM
IAHGRLIKQEMGENCRVVFIGPCYAKKEEALTRGEGSIDAVLTFEEIFNYLDRLNQDIPPRNIFPDRTSNRARRFPLPGG
ALRTGGLNELNIKPDDIVSISGLEDCMETFRDIEKGLIKPRFIEAMACRGGCLGGPAMGEDAGILARKQRLYNNLNRGQQ
SCRGANNKGIIVSWSYTPREIDYKVPDEEEIKRILALTGKTSPEDETNCGGCGYPSCRDKAIAVYNGLANPEMCIPYMRE
KAESLSHAVVDSTLNGIIIVDKDMIIQDFNPAANRMFNRRDIKAKGKPLSTFIDPGDYIDVWENQEMITDNCKQYPQYEL
ITRETIYPLPKYGVVIGIITDVTEEEKTRAEIDNMRQEALDRASQVIKEQMRVAQEIAGLLGESTADTKATLLELKEIIG
QREAKTNGDES
>Mature_570_residues
GLVITSEAKCRDCYKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNAKKTEQYLDKFKNYIASGNKVVVSLAPS
YLASGYFSTPWKLVGALKELGVDVVEETAIGAEVIADEYRDLLNKKELIISSCCPTVVNLVEKYFPGLCDYLAPVISPMI
AHGRLIKQEMGENCRVVFIGPCYAKKEEALTRGEGSIDAVLTFEEIFNYLDRLNQDIPPRNIFPDRTSNRARRFPLPGGA
LRTGGLNELNIKPDDIVSISGLEDCMETFRDIEKGLIKPRFIEAMACRGGCLGGPAMGEDAGILARKQRLYNNLNRGQQS
CRGANNKGIIVSWSYTPREIDYKVPDEEEIKRILALTGKTSPEDETNCGGCGYPSCRDKAIAVYNGLANPEMCIPYMREK
AESLSHAVVDSTLNGIIIVDKDMIIQDFNPAANRMFNRRDIKAKGKPLSTFIDPGDYIDVWENQEMITDNCKQYPQYELI
TRETIYPLPKYGVVIGIITDVTEEEKTRAEIDNMRQEALDRASQVIKEQMRVAQEIAGLLGESTADTKATLLELKEIIGQ
REAKTNGDES

Specific function: Unknown

COG id: COG4624

COG function: function code R; Iron only hydrogenase large subunit, C-terminal domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 4Fe-4S ferredoxin-type domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR017900
- InterPro:   IPR012675
- InterPro:   IPR009016
- InterPro:   IPR004108
- InterPro:   IPR003149
- InterPro:   IPR013352
- InterPro:   IPR001041 [H]

Pfam domain/function: PF02906 Fe_hyd_lg_C; PF02256 Fe_hyd_SSU [H]

EC number: =1.12.7.2 [H]

Molecular weight: Translated: 63637; Mature: 63505

Theoretical pI: Translated: 4.90; Mature: 4.90

Prosite motif: PS00198 4FE4S_FERREDOXIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
3.9 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
6.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLVITSEAKCRDCYKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNAKKTEQY
CCEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEECCCCEEHHHHHHHHCCCCHHHHHHH
LDKFKNYIASGNKVVVSLAPSYLASGYFSTPWKLVGALKELGVDVVEETAIGAEVIADEY
HHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RDLLNKKELIISSCCPTVVNLVEKYFPGLCDYLAPVISPMIAHGRLIKQEMGENCRVVFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GPCYAKKEEALTRGEGSIDAVLTFEEIFNYLDRLNQDIPPRNIFPDRTSNRARRFPLPGG
ECCCCCHHHHHHCCCCCCHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ALRTGGLNELNIKPDDIVSISGLEDCMETFRDIEKGLIKPRFIEAMACRGGCLGGPAMGE
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
DAGILARKQRLYNNLNRGQQSCRGANNKGIIVSWSYTPREIDYKVPDEEEIKRILALTGK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
TSPEDETNCGGCGYPSCRDKAIAVYNGLANPEMCIPYMREKAESLSHAVVDSTLNGIIIV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DKDMIIQDFNPAANRMFNRRDIKAKGKPLSTFIDPGDYIDVWENQEMITDNCKQYPQYEL
ECCHHEECCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCEECCCCCHHHHHHHHHCCCEEE
ITRETIYPLPKYGVVIGIITDVTEEEKTRAEIDNMRQEALDRASQVIKEQMRVAQEIAGL
EEHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGESTADTKATLLELKEIIGQREAKTNGDES
HCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC
>Mature Secondary Structure 
GLVITSEAKCRDCYKCIRYCPVKAIGIKDGQAWVDEDRCILCGRCIEACPQNAKKTEQY
CEEECCCHHHHHHHHHHHHCCCEEEECCCCCCEECCCCEEHHHHHHHHCCCCHHHHHHH
LDKFKNYIASGNKVVVSLAPSYLASGYFSTPWKLVGALKELGVDVVEETAIGAEVIADEY
HHHHHHHHCCCCEEEEEECHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHH
RDLLNKKELIISSCCPTVVNLVEKYFPGLCDYLAPVISPMIAHGRLIKQEMGENCRVVFI
HHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEE
GPCYAKKEEALTRGEGSIDAVLTFEEIFNYLDRLNQDIPPRNIFPDRTSNRARRFPLPGG
ECCCCCHHHHHHCCCCCCHHEEEHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCC
ALRTGGLNELNIKPDDIVSISGLEDCMETFRDIEKGLIKPRFIEAMACRGGCLGGPAMGE
CCCCCCCCCCCCCCCCEEEECCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCC
DAGILARKQRLYNNLNRGQQSCRGANNKGIIVSWSYTPREIDYKVPDEEEIKRILALTGK
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHCCC
TSPEDETNCGGCGYPSCRDKAIAVYNGLANPEMCIPYMREKAESLSHAVVDSTLNGIIIV
CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEE
DKDMIIQDFNPAANRMFNRRDIKAKGKPLSTFIDPGDYIDVWENQEMITDNCKQYPQYEL
ECCHHEECCCHHHHHHCCCCCCCCCCCCCHHCCCCCCCEECCCCCHHHHHHHHHCCCEEE
ITRETIYPLPKYGVVIGIITDVTEEEKTRAEIDNMRQEALDRASQVIKEQMRVAQEIAGL
EEHHHCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGESTADTKATLLELKEIIGQREAKTNGDES
HCCCCCHHHHHHHHHHHHHCCHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1911757; 9836629; 10529166 [H]