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The map label for this gene is dcd

Identifier: 220931019

GI number: 220931019

Start: 175176

End: 175724

Strand: Direct

Name: dcd

Synonym: Hore_01700

Alternate gene names: 220931019

Gene position: 175176-175724 (Clockwise)

Preceding gene: 220931018

Following gene: 220931020

Centisome position: 6.79

GC content: 37.7

Gene sequence:

>549_bases
ATGATACTGTCTGACAGGACTATAAACCAGATGATTAAAAACGGTGAATTGGTTGTAGAACCACTGGAAGAGTACCAGAT
ACAGCCTGCTTCTATTGATTTAAGACTGGGAAGTAGCTTTTTAAAAATTGATGAAAACCTTATGGAAGTTATGACTTTAA
ATGATGAAATTAAATATGTAAACCTGGAACGAAAAGAAATAATTGTTCCTCCTAATTCATTTCTTCTGGCGACAACCAGA
GAATATATTAAACTACCTCCTGATATTACTGCTTTTGTTGAAGGGAGAAGTTCCATAGGCAGGATGGGTTTGTTTATCCA
GAATGCTGGCTGGGTTGATCCGGGTTTTGAGGGACAGATAACCCTTGAATTATATAATGCCAACAGGTTACCGATTAAGT
TAACGGCAGGGCGCCGTATCTGTCAGCTGGTTTTAGCCCGAATGGATAAGGAAGCTAAAACTCCCTACCAGGGTAAATAT
TTGTATCAGAAAAAAGCAGTTGGTAGTCGGGTTTATCAGGATCTTGAAAATAAACAAAATAAGAATTGA

Upstream 100 bases:

>100_bases
GCCCTGGATGCCCTGGAGAAAATACTGTCTGGCGAAGATGGATTATTGGATAATCAGGTGGGCTAATTTGTGGTTAAGAA
AAATAGAAAGGGAGAGGAAA

Downstream 100 bases:

>100_bases
GCAGAGTTGAGTTTTAGGAGGGTTTCAGCATGAAAGAAATAATTGTAACCGGTATAAATGATAAAATAGGTCCGGGCGAT
ATAGTCGGGGCCTTTATTAA

Product: dCTP deaminase

Products: NA

Alternate protein names: dCTP deaminase

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MILSDRTINQMIKNGELVVEPLEEYQIQPASIDLRLGSSFLKIDENLMEVMTLNDEIKYVNLERKEIIVPPNSFLLATTR
EYIKLPPDITAFVEGRSSIGRMGLFIQNAGWVDPGFEGQITLELYNANRLPIKLTAGRRICQLVLARMDKEAKTPYQGKY
LYQKKAVGSRVYQDLENKQNKN

Sequences:

>Translated_182_residues
MILSDRTINQMIKNGELVVEPLEEYQIQPASIDLRLGSSFLKIDENLMEVMTLNDEIKYVNLERKEIIVPPNSFLLATTR
EYIKLPPDITAFVEGRSSIGRMGLFIQNAGWVDPGFEGQITLELYNANRLPIKLTAGRRICQLVLARMDKEAKTPYQGKY
LYQKKAVGSRVYQDLENKQNKN
>Mature_182_residues
MILSDRTINQMIKNGELVVEPLEEYQIQPASIDLRLGSSFLKIDENLMEVMTLNDEIKYVNLERKEIIVPPNSFLLATTR
EYIKLPPDITAFVEGRSSIGRMGLFIQNAGWVDPGFEGQITLELYNANRLPIKLTAGRRICQLVLARMDKEAKTPYQGKY
LYQKKAVGSRVYQDLENKQNKN

Specific function: De novo synthesis of thymidylate. [C]

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the dCTP deaminase family

Homologues:

Organism=Escherichia coli, GI1788379, Length=194, Percent_Identity=32.9896907216495, Blast_Score=92, Evalue=2e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DCD_HALOH (B8D0W3)

Other databases:

- EMBL:   CP001098
- RefSeq:   YP_002507927.1
- ProteinModelPortal:   B8D0W3
- SMR:   B8D0W3
- GeneID:   7313298
- GenomeReviews:   CP001098_GR
- KEGG:   hor:Hore_01700
- HOGENOM:   HBG553199
- OMA:   FSGHVTL
- ProtClustDB:   CLSK2806174
- HAMAP:   MF_00146
- InterPro:   IPR011962
- InterPro:   IPR008180
- TIGRFAMs:   TIGR02274

Pfam domain/function: PF00692 dUTPase

EC number: =3.5.4.13

Molecular weight: Translated: 20854; Mature: 20854

Theoretical pI: Translated: 8.38; Mature: 8.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILSDRTINQMIKNGELVVEPLEEYQIQPASIDLRLGSSFLKIDENLMEVMTLNDEIKYV
CCCCCHHHHHHHHCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEE
NLERKEIIVPPNSFLLATTREYIKLPPDITAFVEGRSSIGRMGLFIQNAGWVDPGFEGQI
EECCCEEEECCCCEEEEECHHHEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCEE
TLELYNANRLPIKLTAGRRICQLVLARMDKEAKTPYQGKYLYQKKAVGSRVYQDLENKQN
EEEEECCCCCEEEECCCHHHHHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCC
KN
CC
>Mature Secondary Structure
MILSDRTINQMIKNGELVVEPLEEYQIQPASIDLRLGSSFLKIDENLMEVMTLNDEIKYV
CCCCCHHHHHHHHCCCEEEEEHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHCCCCEEEE
NLERKEIIVPPNSFLLATTREYIKLPPDITAFVEGRSSIGRMGLFIQNAGWVDPGFEGQI
EECCCEEEECCCCEEEEECHHHEECCCCCEEEECCCCCCCCEEEEEECCCCCCCCCCCEE
TLELYNANRLPIKLTAGRRICQLVLARMDKEAKTPYQGKYLYQKKAVGSRVYQDLENKQN
EEEEECCCCCEEEECCCHHHHHHHHHHHCHHCCCCCCCCEEHHHHHHHHHHHHHHHHHCC
KN
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA