| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is 220930987
Identifier: 220930987
GI number: 220930987
Start: 148010
End: 148294
Strand: Direct
Name: 220930987
Synonym: Hore_01390
Alternate gene names: NA
Gene position: 148010-148294 (Clockwise)
Preceding gene: 220930986
Following gene: 220930988
Centisome position: 5.74
GC content: 36.84
Gene sequence:
>285_bases ATGTGTGGTAAGTTTCAGTTGGGCGAGATGGTTAAGTCAATTGCGGGCCGTGATACTGGAAAATATTATATTGTAGTTAA AATAGATAACGAAAAATACGTTCAGGTAGCAGATGGCGATAAAAAGCGACTGGAACGGCCCAAAAGAAAGAATGTTAAAC ACCTTAAACCGGCCGGATTTGTGCATAAGGAATTACAGATCTGGTTATCGAATGGTAAAAGGGTGCGTAATGAGGATATT AAAAAAATAATAAAAGATTTTGTGAAAAATGAGGAGGCTAACTAA
Upstream 100 bases:
>100_bases TCTGAGCTGTCTGGAGTCCTGATTGCATTTTTCTGTTTTGTTGTGATATAATAATTTGGAGGTTTTGCAGGAAATATCCT CCTGGAAAAGGGGGGGTTTT
Downstream 100 bases:
>100_bases CCCTATGGCTAAAGAGGAAGCTATTGAAGTTCAGGGAACGGTTGTTGAACCCCTTCCTAATGCTATGTTTAGGGTTGAAC TGGATAATGGACACAAGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: KOW Domain Protein
Number of amino acids: Translated: 94; Mature: 94
Protein sequence:
>94_residues MCGKFQLGEMVKSIAGRDTGKYYIVVKIDNEKYVQVADGDKKRLERPKRKNVKHLKPAGFVHKELQIWLSNGKRVRNEDI KKIIKDFVKNEEAN
Sequences:
>Translated_94_residues MCGKFQLGEMVKSIAGRDTGKYYIVVKIDNEKYVQVADGDKKRLERPKRKNVKHLKPAGFVHKELQIWLSNGKRVRNEDI KKIIKDFVKNEEAN >Mature_94_residues MCGKFQLGEMVKSIAGRDTGKYYIVVKIDNEKYVQVADGDKKRLERPKRKNVKHLKPAGFVHKELQIWLSNGKRVRNEDI KKIIKDFVKNEEAN
Specific function: Unknown
COG id: COG2163
COG function: function code J; Ribosomal protein L14E/L6E/L27E
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10958; Mature: 10958
Theoretical pI: Translated: 10.51; Mature: 10.51
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MCGKFQLGEMVKSIAGRDTGKYYIVVKIDNEKYVQVADGDKKRLERPKRKNVKHLKPAGF CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCHHHHCCCCCCCCCCCCCCCH VHKELQIWLSNGKRVRNEDIKKIIKDFVKNEEAN HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC >Mature Secondary Structure MCGKFQLGEMVKSIAGRDTGKYYIVVKIDNEKYVQVADGDKKRLERPKRKNVKHLKPAGF CCCCCHHHHHHHHHHCCCCCCEEEEEEECCCCEEEECCCCHHHHCCCCCCCCCCCCCCCH VHKELQIWLSNGKRVRNEDIKKIIKDFVKNEEAN HHHHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA