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The map label for this gene is 220930959

Identifier: 220930959

GI number: 220930959

Start: 131728

End: 131976

Strand: Direct

Name: 220930959

Synonym: Hore_01110

Alternate gene names: NA

Gene position: 131728-131976 (Clockwise)

Preceding gene: 220930958

Following gene: 220930960

Centisome position: 5.11

GC content: 36.14

Gene sequence:

>249_bases
ATGATGCTAACCGAGCTTAAGAATATAGATAATAAGGTAGTAGGTACCAAGCAGACCTTAAAAGCAATAAAAAATAGTGA
AGTCAAAAAAGTTTTCCTGGCTGAAGATATCGACAAACCATTATATAATCAGATTGTAGAAACTGCAACCCAATATGATG
TACCTATTGAAAAAGTTGATAGTAAACTGAGATTAGGCCGTGCCTGCGGAATTGATGTATCGGCCGCCTGTGCAGCATTA
TTGAAATAA

Upstream 100 bases:

>100_bases
TTTCAAATTAAAAAAATCTTATTGACATCAAACATGAAAGGTGTTAAAATACTTAAGTGTGTGTTAGTTAAACTGGTCTT
CCGGGAGAGGGGGATGAGTG

Downstream 100 bases:

>100_bases
CTGGAAGGAGGTGTTTTTATGCCAACAATTAATCAGCTAATACGCAAGGGGAGAAAAAAGGTTAAGAAGAAAAAGACTGC
ACCTGCCCTCCAAGGTTCAC

Product: 50S ribosomal protein L7Ae/L30e/S12e/Gadd45

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 82

Protein sequence:

>82_residues
MMLTELKNIDNKVVGTKQTLKAIKNSEVKKVFLAEDIDKPLYNQIVETATQYDVPIEKVDSKLRLGRACGIDVSAACAAL
LK

Sequences:

>Translated_82_residues
MMLTELKNIDNKVVGTKQTLKAIKNSEVKKVFLAEDIDKPLYNQIVETATQYDVPIEKVDSKLRLGRACGIDVSAACAAL
LK
>Mature_82_residues
MMLTELKNIDNKVVGTKQTLKAIKNSEVKKVFLAEDIDKPLYNQIVETATQYDVPIEKVDSKLRLGRACGIDVSAACAAL
LK

Specific function: Unknown

COG id: COG1358

COG function: function code J; Ribosomal protein HS6-type (S12/L30/L7a)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ribosomal protein L7Ae family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004038 [H]

Pfam domain/function: PF01248 Ribosomal_L7Ae [H]

EC number: NA

Molecular weight: Translated: 9051; Mature: 9051

Theoretical pI: Translated: 8.73; Mature: 8.73

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMLTELKNIDNKVVGTKQTLKAIKNSEVKKVFLAEDIDKPLYNQIVETATQYDVPIEKVD
CCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHH
SKLRLGRACGIDVSAACAALLK
HHHHHCCCCCCCHHHHHHHHCC
>Mature Secondary Structure
MMLTELKNIDNKVVGTKQTLKAIKNSEVKKVFLAEDIDKPLYNQIVETATQYDVPIEKVD
CCCCHHHCCCCCCCCCHHHHHHHHCCHHHHHHHHHHCCCHHHHHHHHHHHHCCCCHHHHH
SKLRLGRACGIDVSAACAALLK
HHHHHCCCCCCCHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA