| Definition | Halothermothrix orenii H 168 chromosome, complete genome. |
|---|---|
| Accession | NC_011899 |
| Length | 2,578,146 |
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The map label for this gene is htrA [H]
Identifier: 220930913
GI number: 220930913
Start: 76101
End: 77303
Strand: Reverse
Name: htrA [H]
Synonym: Hore_00650
Alternate gene names: 220930913
Gene position: 77303-76101 (Counterclockwise)
Preceding gene: 220930918
Following gene: 220930894
Centisome position: 3.0
GC content: 40.57
Gene sequence:
>1203_bases ATGTCCCGGAGCAAAAGGAAAATAATGTTATTTGCTATAATTCTGGCTGTTGTTTTTACAACTGGTATCTTTGTCGGTTC ACATTATGAATTAACCCCTACCAAAATTTATGCAGACCAGGAAAATGGCAGTTTAGTTGAAAACAATGAAGAAAATCCTG CTGATCAGGATAAGATTGTTATAACTGATACCAATATTTTCGCCGATATAGCGGCCAAAGTTGATGCCGGAGTTGTTAAA GTAACTTCATATACTAAAGTTCAGGGTGGGCAGTATTCAGACCCCTTTTTTAATGATCCTTTTTTCCGCTACTTCTTTGG TGATCAATTGCCTTATCCCGAGCAACAACCGCGACTTGAAGAAGGCTTTGGTACCGGATTTATTGTATCAAAAGATGGTT ATATTGTTACCAATGAACATGTAATCCATGGAGCCGAAAAGATAGAAGTTACTATAAAGGGTTTCGATAAACCCGTGCCT GCAGAAATAGCCTGGTCTGACTTTAGCCTCGACCTGGCGGTTTTAAAGGTTAATGTAGATAGGGATTTAACCCCGATTAA ACTTGGTGATTCAGATAAGATAAGGCCAGGTGACTGGGTTATTGCCATCGGTAATCCGTTCGGGTTTGAACACACCGTAA CCATTGGTGTAGTCAGTGCCCTGGGTCGCCCCATTCAGATTCCAACCCAGGATGGGCAGGTAAGAACCTATCGGAATCTG ATCCAGACCGATGCTGCTATTAACCCCGGTAACAGTGGTGGTCCTCTCCTGAATATAGACGGAGAAGTTATTGGAATCAA CACTGCTGTAAGTGCCCAGGGCCAGGGTATTGGTTTTGCCATTCCGGCCAATGAGGTTAAGGAAATAGTAAATGACCTTA AAACCAAAGGGGAAGTTATCAGACCCTGGATTGGGATTTATATGAATAAAATAACACCAGATGTTAAAGAATACTTCAAC CTTGATAACACAGAAGGAGCTATAATTGTCGGTGTTGTTGAAAATAGTCCGGCTGCTGAAGCAGGGATAAAACCATATGA CATTATTAAAGAAATTGACCGCAAACCCGTTAATACCCCGGAAGATGTTGTTAATATAGTTAAAAACAAAAAAGTAGGAG ATAAAGTCCTCCTCAAAATCTTAAGGAATGGGGACCCGAGATTAATCTTTGTTGAAATTGGTAAAAGGCCAAATCAATTT TAG
Upstream 100 bases:
>100_bases TTAGAAATTTTGAGTATGTATAAGTATGTAATGTACTTATTGGTTAGATACCATATCCAGAAATTTATATTACAAATCAG TAAAGGAAAGGTGGTATATT
Downstream 100 bases:
>100_bases ATAAATATACCTCTGAATATTACCACCTCAATACTATCATACAATACCATATAAATAATCTTTACCATATAAATAATCCT TTTAAAAAGCAAACCCCCTG
Product: 2-alkenal reductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSRSKRKIMLFAIILAVVFTTGIFVGSHYELTPTKIYADQENGSLVENNEENPADQDKIVITDTNIFADIAAKVDAGVVK VTSYTKVQGGQYSDPFFNDPFFRYFFGDQLPYPEQQPRLEEGFGTGFIVSKDGYIVTNEHVIHGAEKIEVTIKGFDKPVP AEIAWSDFSLDLAVLKVNVDRDLTPIKLGDSDKIRPGDWVIAIGNPFGFEHTVTIGVVSALGRPIQIPTQDGQVRTYRNL IQTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQGIGFAIPANEVKEIVNDLKTKGEVIRPWIGIYMNKITPDVKEYFN LDNTEGAIIVGVVENSPAAEAGIKPYDIIKEIDRKPVNTPEDVVNIVKNKKVGDKVLLKILRNGDPRLIFVEIGKRPNQF
Sequences:
>Translated_400_residues MSRSKRKIMLFAIILAVVFTTGIFVGSHYELTPTKIYADQENGSLVENNEENPADQDKIVITDTNIFADIAAKVDAGVVK VTSYTKVQGGQYSDPFFNDPFFRYFFGDQLPYPEQQPRLEEGFGTGFIVSKDGYIVTNEHVIHGAEKIEVTIKGFDKPVP AEIAWSDFSLDLAVLKVNVDRDLTPIKLGDSDKIRPGDWVIAIGNPFGFEHTVTIGVVSALGRPIQIPTQDGQVRTYRNL IQTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQGIGFAIPANEVKEIVNDLKTKGEVIRPWIGIYMNKITPDVKEYFN LDNTEGAIIVGVVENSPAAEAGIKPYDIIKEIDRKPVNTPEDVVNIVKNKKVGDKVLLKILRNGDPRLIFVEIGKRPNQF >Mature_399_residues SRSKRKIMLFAIILAVVFTTGIFVGSHYELTPTKIYADQENGSLVENNEENPADQDKIVITDTNIFADIAAKVDAGVVKV TSYTKVQGGQYSDPFFNDPFFRYFFGDQLPYPEQQPRLEEGFGTGFIVSKDGYIVTNEHVIHGAEKIEVTIKGFDKPVPA EIAWSDFSLDLAVLKVNVDRDLTPIKLGDSDKIRPGDWVIAIGNPFGFEHTVTIGVVSALGRPIQIPTQDGQVRTYRNLI QTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQGIGFAIPANEVKEIVNDLKTKGEVIRPWIGIYMNKITPDVKEYFNL DNTEGAIIVGVVENSPAAEAGIKPYDIIKEIDRKPVNTPEDVVNIVKNKKVGDKVLLKILRNGDPRLIFVEIGKRPNQF
Specific function: A putative protease, its function overlaps that of the related putative proteases HhoA and HhoB [H]
COG id: COG0265
COG function: function code O; Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
Gene ontology:
Cell location: Cell inner membrane; Single-pass membrane protein (Potential). Cell outer membrane (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 PDZ (DHR) domain [H]
Homologues:
Organism=Homo sapiens, GI4506141, Length=301, Percent_Identity=36.8770764119601, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI24308541, Length=279, Percent_Identity=34.4086021505376, Blast_Score=153, Evalue=2e-37, Organism=Homo sapiens, GI22129776, Length=347, Percent_Identity=32.8530259365994, Blast_Score=145, Evalue=6e-35, Organism=Homo sapiens, GI7019477, Length=281, Percent_Identity=35.2313167259786, Blast_Score=144, Evalue=2e-34, Organism=Escherichia coli, GI1789629, Length=292, Percent_Identity=42.8082191780822, Blast_Score=215, Evalue=3e-57, Organism=Escherichia coli, GI1786356, Length=319, Percent_Identity=37.3040752351097, Blast_Score=195, Evalue=5e-51, Organism=Escherichia coli, GI1789630, Length=281, Percent_Identity=36.6548042704626, Blast_Score=147, Evalue=9e-37, Organism=Drosophila melanogaster, GI24646839, Length=338, Percent_Identity=34.3195266272189, Blast_Score=156, Evalue=3e-38,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001478 - InterPro: IPR009003 - InterPro: IPR001254 - InterPro: IPR001940 [H]
Pfam domain/function: PF00595 PDZ; PF00089 Trypsin [H]
EC number: 3.4.21.- [C]
Molecular weight: Translated: 43969; Mature: 43837
Theoretical pI: Translated: 4.81; Mature: 4.81
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 0.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRSKRKIMLFAIILAVVFTTGIFVGSHYELTPTKIYADQENGSLVENNEENPADQDKIV CCCCHHHHHHHHHHHHHHHHHHEEECCCEEECCEEEEEECCCCCEECCCCCCCCCCCEEE ITDTNIFADIAAKVDAGVVKVTSYTKVQGGQYSDPFFNDPFFRYFFGDQLPYPEQQPRLE EEECCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHH EGFGTGFIVSKDGYIVTNEHVIHGAEKIEVTIKGFDKPVPAEIAWSDFSLDLAVLKVNVD HCCCCEEEEECCCEEEECCEEEECCEEEEEEEECCCCCCCCEEEECCCEEEEEEEEEECC RDLTPIKLGDSDKIRPGDWVIAIGNPFGFEHTVTIGVVSALGRPIQIPTQDGQVRTYRNL CCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCEECCCCCCCHHHHHHH IQTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQGIGFAIPANEVKEIVNDLKTKGEVI HHHCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHH RPWIGIYMNKITPDVKEYFNLDNTEGAIIVGVVENSPAAEAGIKPYDIIKEIDRKPVNTP HHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHCCCCCCCH EDVVNIVKNKKVGDKVLLKILRNGDPRLIFVEIGKRPNQF HHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC >Mature Secondary Structure SRSKRKIMLFAIILAVVFTTGIFVGSHYELTPTKIYADQENGSLVENNEENPADQDKIV CCCHHHHHHHHHHHHHHHHHHEEECCCEEECCEEEEEECCCCCEECCCCCCCCCCCEEE ITDTNIFADIAAKVDAGVVKVTSYTKVQGGQYSDPFFNDPFFRYFFGDQLPYPEQQPRLE EEECCHHHHHHHHCCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCHH EGFGTGFIVSKDGYIVTNEHVIHGAEKIEVTIKGFDKPVPAEIAWSDFSLDLAVLKVNVD HCCCCEEEEECCCEEEECCEEEECCEEEEEEEECCCCCCCCEEEECCCEEEEEEEEEECC RDLTPIKLGDSDKIRPGDWVIAIGNPFGFEHTVTIGVVSALGRPIQIPTQDGQVRTYRNL CCCCEEEECCCCCCCCCCEEEEECCCCCCCEEEHHHHHHHCCCCEECCCCCCCHHHHHHH IQTDAAINPGNSGGPLLNIDGEVIGINTAVSAQGQGIGFAIPANEVKEIVNDLKTKGEVI HHHCCCCCCCCCCCCEEEECCEEEEEEEEEECCCCCEEEEECHHHHHHHHHHHHHCCCHH RPWIGIYMNKITPDVKEYFNLDNTEGAIIVGVVENSPAAEAGIKPYDIIKEIDRKPVNTP HHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCHHCCCCHHHHHHHHCCCCCCCH EDVVNIVKNKKVGDKVLLKILRNGDPRLIFVEIGKRPNQF HHHHHHHHCCCCCHHHHHHHHHCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8905231 [H]