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The map label for this gene is tsr [C]

Identifier: 220930896

GI number: 220930896

Start: 53950

End: 55980

Strand: Direct

Name: tsr [C]

Synonym: Hore_00480

Alternate gene names: 220930896

Gene position: 53950-55980 (Clockwise)

Preceding gene: 220930895

Following gene: 220930897

Centisome position: 2.09

GC content: 39.98

Gene sequence:

>2031_bases
GTGTTTTTAAAAAAATTAAATATTTTTTCGCCCATTTATAGAATATTGAAAAAAATAATAAGTAGTTATTCCCTTTACAC
CAAATTATTGCTGTTCTTTTTAATTGTAATGATTATACCTCTTGGTTTGACCTTTTATAATGATTATCGCTTGACCAATG
ATTCCCTGGAAAAGAGGCTGGATGAAAAAATACTGACCGGGAAAAATTTTGTAGAAAGGATATATGAATCTGATATCAAT
AGGGTTGAAGGGCTGGCGGTTATAAAAGCCAGTGATACCTCAATCCAGGAAACCGTTGCTACCAAAAATTTGTTGCAGTT
GATGAATATTCTCAGGCCGGCATTTATTAATAAAAACAATATTGATCTAGCCGCTATTTTAGATAGCAAGGGTAAAGTTA
TAACCCGCCGGGGAAACCTCCCTAATAAGGATTATAAACTGGAGTCCAGGTACATAGAGGGGATAAATGATAAAAGGATC
TCTGTTAACCAGATTGAGATGACCACAGAGGGGATAGTTATCAAGGGAGCCCAGGCTATTACTGACCCCGATCAGGCTAA
CCTGGTTCACGGTATCTTTTTAACCGGGCTTGTTATGGATAAAAGTTACTGGATAGATTTAAGTCAGGACCTGGGAATGG
AAATAATATTATTTGATAAAGATGGTCAGCCTGTTACAGCTTCTTTCAGTAATGAAAAGCTTTCTAAAATAAGTTTAAAA
ACTAATACAGAGGATAGCAACAACATATGGGTAGATCATTTAATTTCAGATACAGAGTACAGAATGGTTGCTTTTCCGGT
TACTGACCATAATAGTAAAATTATTGCCTATCTAGGGGTAACAACACCCAAAACCCCTATACTAAATGCAGGCAATAAAA
TGAAACAGTCGATGATTATTTATGCTCTTATCGGTGCCTCTATTGCCATACTAGTGGGGATATTTCTGGCCAGGAGTATC
AGTAAGAGGGTTAAAGGCTTAATCAGTGTAGTCGAACGGGTCGCTGAAGGTGATCTGAGTCAGAAGATAAAGATCAAAGG
CCGTGATGAAATAGCTTACCTCGGTAAGAGTCTGAACCAGATGGTTAATAATTTAAAGGGCCTGGTAATAGAAGTTATGT
CCAGTTCTAATCAGGTTGCGTCTGCGGCTCAGGAGCTGGCCGGTTCCAGCCAGGAAGCCACCGCTATAACGGAACAGGTT
ACAGCTACCAGTGAAAATATTTCAGATGGAACTGCTGAACAGGTAGAAAAAATTAATGAAGCATCATTAATTATTAAAGA
AATGTCCCGGTCTATTCAAGAAGTGGCTAAAGGGGCCCAGGAGGTTGCGGGTAAATCAAAGACTGCCCGGAACCAGGTAG
AACTGGGTCAGGAAGCTTTAGAAGACTTGCTCCATCAGATTGATAAAATTGGAGAAATAGTAGAACAATCAGCCAGGGTT
ATAAAACAACTCGATACCCGGTCCAAGGAAATTAATAAAATTATCGGATTAATCAGTGAAATTACCGAACAGACAGACTT
ACTGGCCTTAAATGCCGCTATAGAGGCGGCCCGGGCCGGAGAACATGGCCGGGGTTTTGCCGTAGTAGCTGATGAGGTAA
GAACCCTTGCCAACCAGTCAAATGAGGCTGCTACCAATATTAGCAAGATTATAGAGGAAATTCAGAATGATACCCAGAAA
GCAGTAGATGTTATGGATGAGGGAACCACGGTGGTAGAAGAGGGTAATTTTGCTGCTGGTAAGGCTAAAGACACATTTGC
CGGGATCAGACAGGCTGTTGAAGATACCTCAAAAATTGCTGAAAGTATTGCTGAGGCTACCAGGGAACAGAAACATGGTA
GTGATGAAATGGTAACTGCCATAGAGGAAATTAATAATATATCCCAGAATACAGCCCAGGGTGCTGGTCAGATTAACCAG
GCTATAAGTGAACAGTCTCAGACCATCGAAGGTATTTCCAATTCTTCAGAAACCCTGGCTATCATGGCAGATAAACTCAG
AGGATTAATTGATAAATTTAAGACTGAATAG

Upstream 100 bases:

>100_bases
AGTATATTTTTATGGTATGGTCGGTAATTTAATGTTGGTTTTTTTGTGGGTAAAACGTTTGCACAAATAATAAAACGTTT
GCGCAAAGGAGGAAGCTTAA

Downstream 100 bases:

>100_bases
GAGAACAGATTAAAGGAATAAGATTATTTAATTAAAATTGTGGAGGCGCGGTTAAATCATCCAGTGGTTTAACTGCGCTT
TCGTAATTAATTAGATTTCA

Product: methyl-accepting chemotaxis sensory transducer

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 676; Mature: 676

Protein sequence:

>676_residues
MFLKKLNIFSPIYRILKKIISSYSLYTKLLLFFLIVMIIPLGLTFYNDYRLTNDSLEKRLDEKILTGKNFVERIYESDIN
RVEGLAVIKASDTSIQETVATKNLLQLMNILRPAFINKNNIDLAAILDSKGKVITRRGNLPNKDYKLESRYIEGINDKRI
SVNQIEMTTEGIVIKGAQAITDPDQANLVHGIFLTGLVMDKSYWIDLSQDLGMEIILFDKDGQPVTASFSNEKLSKISLK
TNTEDSNNIWVDHLISDTEYRMVAFPVTDHNSKIIAYLGVTTPKTPILNAGNKMKQSMIIYALIGASIAILVGIFLARSI
SKRVKGLISVVERVAEGDLSQKIKIKGRDEIAYLGKSLNQMVNNLKGLVIEVMSSSNQVASAAQELAGSSQEATAITEQV
TATSENISDGTAEQVEKINEASLIIKEMSRSIQEVAKGAQEVAGKSKTARNQVELGQEALEDLLHQIDKIGEIVEQSARV
IKQLDTRSKEINKIIGLISEITEQTDLLALNAAIEAARAGEHGRGFAVVADEVRTLANQSNEAATNISKIIEEIQNDTQK
AVDVMDEGTTVVEEGNFAAGKAKDTFAGIRQAVEDTSKIAESIAEATREQKHGSDEMVTAIEEINNISQNTAQGAGQINQ
AISEQSQTIEGISNSSETLAIMADKLRGLIDKFKTE

Sequences:

>Translated_676_residues
MFLKKLNIFSPIYRILKKIISSYSLYTKLLLFFLIVMIIPLGLTFYNDYRLTNDSLEKRLDEKILTGKNFVERIYESDIN
RVEGLAVIKASDTSIQETVATKNLLQLMNILRPAFINKNNIDLAAILDSKGKVITRRGNLPNKDYKLESRYIEGINDKRI
SVNQIEMTTEGIVIKGAQAITDPDQANLVHGIFLTGLVMDKSYWIDLSQDLGMEIILFDKDGQPVTASFSNEKLSKISLK
TNTEDSNNIWVDHLISDTEYRMVAFPVTDHNSKIIAYLGVTTPKTPILNAGNKMKQSMIIYALIGASIAILVGIFLARSI
SKRVKGLISVVERVAEGDLSQKIKIKGRDEIAYLGKSLNQMVNNLKGLVIEVMSSSNQVASAAQELAGSSQEATAITEQV
TATSENISDGTAEQVEKINEASLIIKEMSRSIQEVAKGAQEVAGKSKTARNQVELGQEALEDLLHQIDKIGEIVEQSARV
IKQLDTRSKEINKIIGLISEITEQTDLLALNAAIEAARAGEHGRGFAVVADEVRTLANQSNEAATNISKIIEEIQNDTQK
AVDVMDEGTTVVEEGNFAAGKAKDTFAGIRQAVEDTSKIAESIAEATREQKHGSDEMVTAIEEINNISQNTAQGAGQINQ
AISEQSQTIEGISNSSETLAIMADKLRGLIDKFKTE
>Mature_676_residues
MFLKKLNIFSPIYRILKKIISSYSLYTKLLLFFLIVMIIPLGLTFYNDYRLTNDSLEKRLDEKILTGKNFVERIYESDIN
RVEGLAVIKASDTSIQETVATKNLLQLMNILRPAFINKNNIDLAAILDSKGKVITRRGNLPNKDYKLESRYIEGINDKRI
SVNQIEMTTEGIVIKGAQAITDPDQANLVHGIFLTGLVMDKSYWIDLSQDLGMEIILFDKDGQPVTASFSNEKLSKISLK
TNTEDSNNIWVDHLISDTEYRMVAFPVTDHNSKIIAYLGVTTPKTPILNAGNKMKQSMIIYALIGASIAILVGIFLARSI
SKRVKGLISVVERVAEGDLSQKIKIKGRDEIAYLGKSLNQMVNNLKGLVIEVMSSSNQVASAAQELAGSSQEATAITEQV
TATSENISDGTAEQVEKINEASLIIKEMSRSIQEVAKGAQEVAGKSKTARNQVELGQEALEDLLHQIDKIGEIVEQSARV
IKQLDTRSKEINKIIGLISEITEQTDLLALNAAIEAARAGEHGRGFAVVADEVRTLANQSNEAATNISKIIEEIQNDTQK
AVDVMDEGTTVVEEGNFAAGKAKDTFAGIRQAVEDTSKIAESIAEATREQKHGSDEMVTAIEEINNISQNTAQGAGQINQ
AISEQSQTIEGISNSSETLAIMADKLRGLIDKFKTE

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI2367378, Length=362, Percent_Identity=29.8342541436464, Blast_Score=137, Evalue=3e-33,
Organism=Escherichia coli, GI1788195, Length=306, Percent_Identity=29.7385620915033, Blast_Score=127, Evalue=3e-30,
Organism=Escherichia coli, GI1787690, Length=344, Percent_Identity=31.1046511627907, Blast_Score=122, Evalue=1e-28,
Organism=Escherichia coli, GI1788194, Length=384, Percent_Identity=28.3854166666667, Blast_Score=117, Evalue=2e-27,
Organism=Escherichia coli, GI1789453, Length=335, Percent_Identity=26.2686567164179, Blast_Score=102, Evalue=7e-23,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004010
- InterPro:   IPR003122
- InterPro:   IPR004089
- InterPro:   IPR003660
- InterPro:   IPR022094 [H]

Pfam domain/function: PF02743 Cache_1; PF00672 HAMP; PF12332 McpA_N; PF00015 MCPsignal; PF02203 TarH [H]

EC number: NA

Molecular weight: Translated: 74259; Mature: 74259

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLKKLNIFSPIYRILKKIISSYSLYTKLLLFFLIVMIIPLGLTFYNDYRLTNDSLEKRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEECHHHHHHHH
DEKILTGKNFVERIYESDINRVEGLAVIKASDTSIQETVATKNLLQLMNILRPAFINKNN
HHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDLAAILDSKGKVITRRGNLPNKDYKLESRYIEGINDKRISVNQIEMTTEGIVIKGAQAI
CEEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCEEEECCHHC
TDPDQANLVHGIFLTGLVMDKSYWIDLSQDLGMEIILFDKDGQPVTASFSNEKLSKISLK
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCCCHHEEEEE
TNTEDSNNIWVDHLISDTEYRMVAFPVTDHNSKIIAYLGVTTPKTPILNAGNKMKQSMII
ECCCCCCCEEEEEHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YALIGASIAILVGIFLARSISKRVKGLISVVERVAEGDLSQKIKIKGRDEIAYLGKSLNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MVNNLKGLVIEVMSSSNQVASAAQELAGSSQEATAITEQVTATSENISDGTAEQVEKINE
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ASLIIKEMSRSIQEVAKGAQEVAGKSKTARNQVELGQEALEDLLHQIDKIGEIVEQSARV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQLDTRSKEINKIIGLISEITEQTDLLALNAAIEAARAGEHGRGFAVVADEVRTLANQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
NEAATNISKIIEEIQNDTQKAVDVMDEGTTVVEEGNFAAGKAKDTFAGIRQAVEDTSKIA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
ESIAEATREQKHGSDEMVTAIEEINNISQNTAQGAGQINQAISEQSQTIEGISNSSETLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IMADKLRGLIDKFKTE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure
MFLKKLNIFSPIYRILKKIISSYSLYTKLLLFFLIVMIIPLGLTFYNDYRLTNDSLEKRL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHEECCCEECHHHHHHHH
DEKILTGKNFVERIYESDINRVEGLAVIKASDTSIQETVATKNLLQLMNILRPAFINKNN
HHHHHCCHHHHHHHHHHHHHHHCCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCC
IDLAAILDSKGKVITRRGNLPNKDYKLESRYIEGINDKRISVNQIEMTTEGIVIKGAQAI
CEEEEEECCCCCEEEECCCCCCCCCCHHHHHHCCCCCCCEEEEEEEEEECCEEEECCHHC
TDPDQANLVHGIFLTGLVMDKSYWIDLSQDLGMEIILFDKDGQPVTASFSNEKLSKISLK
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCCCEEECCCCCCHHEEEEE
TNTEDSNNIWVDHLISDTEYRMVAFPVTDHNSKIIAYLGVTTPKTPILNAGNKMKQSMII
ECCCCCCCEEEEEHCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YALIGASIAILVGIFLARSISKRVKGLISVVERVAEGDLSQKIKIKGRDEIAYLGKSLNQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCHHHHHHHHHHHH
MVNNLKGLVIEVMSSSNQVASAAQELAGSSQEATAITEQVTATSENISDGTAEQVEKINE
HHHHHHHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHH
ASLIIKEMSRSIQEVAKGAQEVAGKSKTARNQVELGQEALEDLLHQIDKIGEIVEQSARV
HHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IKQLDTRSKEINKIIGLISEITEQTDLLALNAAIEAARAGEHGRGFAVVADEVRTLANQS
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCEEEHHHHHHHHHCCC
NEAATNISKIIEEIQNDTQKAVDVMDEGTTVVEEGNFAAGKAKDTFAGIRQAVEDTSKIA
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHHH
ESIAEATREQKHGSDEMVTAIEEINNISQNTAQGAGQINQAISEQSQTIEGISNSSETLA
HHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHH
IMADKLRGLIDKFKTE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA