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The map label for this gene is epsF [H]

Identifier: 220919517

GI number: 220919517

Start: 4940818

End: 4941975

Strand: Direct

Name: epsF [H]

Synonym: A2cp1_4438

Alternate gene names: 220919517

Gene position: 4940818-4941975 (Clockwise)

Preceding gene: 220919507

Following gene: 220919518

Centisome position: 98.24

GC content: 60.45

Gene sequence:

>1158_bases
ATGCTAACGATTCTTCACCTAATCACAGGCCTACGTCGAGGTGGCGCTGAGGCGATGCTCCTCAAGTTGCTCAGCGCTTC
GGATCGTTCCTCCTTTCAGCACGTCGTCGTATCACTGACTTCCGGCGGGCCATTAGCGACCGAAATTGGTGCTCTAGGGG
TTAGGGTCGAATCGCTGGACATGACGCCAGGCATCCCCAGCTTGCGAGCACTGTCGAGCCTCCGCTCCATAATGCGCAAA
GAGCGCCCGCACGTGCTTCAAAGCTGGATGTACCACGCGGATCTTCTCGCCGGACTGGCGTCAATCGGGTATCCGCGCAT
TCCCGTAGTATGGGGCATACACCACAGCACGCTCGATGTTGCCGCCACAAAGCCTCTCACGCGCCTGACTCAACGCGCCT
GCGCTCTTTCCTCCCGGTTCATGCCGAGCCGAATCGTGTGCTGCTCGGAGTCGGCACGTGCGGCACATGTCATGGCGGGG
TACAGTCCCTCGAAGATGCTAGTGATCCCGAACGGCTTCGATCTCGGTCGGTTCCATAGAGACACGGCGGCTCGGGCTGC
ATTTCGTGCTTCCCTAGAGATTCCACAATCCGCACATCTCGTCGGCGTAGTCGCGCGCTGGGATCCGAACAAGGACCATC
GCTCGTTTGTGGCGGCGGCGACCGAGGTCGCCAACCGCTTACCAACTGCCACATTTGCATTATGCGGCGATGGAATCACC
TGGGACAACGCACCGCTCTCATCCATGATCGACGCAACACGCCAGCGCGGTCGCTTCATTCTGCTTGGCGCCCGCTCCGA
CATGCCGCAGCTGATGGCCTCGCTTGACGTCCTCTGCCTATCGTCAACCAGCGAAGGCTTTCCCAACGTTATTGGCGAGG
CCATGGCCGCTGAGACGCCCTGCGTGGTTACGGACTGCGGCGACTGCGCAGCAATCGTTGGCGACGCCGGCCGCGTAGTC
GCTCCCCGCGACCCAAAGGCCCTTGCAGGCGCCTTACTTGAGTTGCTCAGTCTCGACGTGGACGTGCGGCGCCGCCTCGG
AGTACGGGCACGAGAGCGCATTGCCACATTGTTTAGTCTAAGGTCCGTTGCTCAGCGTTATGAGAACGTCTACCGGGAGG
TCGTTGCAACCGATGTCCAGAAGACTTCGCATTGTTGA

Upstream 100 bases:

>100_bases
CGGGTCCCGGCTCCGCCCACCTGCGTGCTTCACCCTGGCGCTCGCCCGCCCGCTTCCCGATCGATACGCGCGCGGGACGC
CGCCCGCAGGACTCGCCTCG

Downstream 100 bases:

>100_bases
GATTACGCCAACACTCGGGGTGGGCGGCGCCGAGCGCGTCGTAGTGCATCTCGCTCGCCACCTGGACCGAGCGCAGTTCG
AAGTATCAGTCGTTTCACTA

Product: group 1 glycosyl transferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 385; Mature: 385

Protein sequence:

>385_residues
MLTILHLITGLRRGGAEAMLLKLLSASDRSSFQHVVVSLTSGGPLATEIGALGVRVESLDMTPGIPSLRALSSLRSIMRK
ERPHVLQSWMYHADLLAGLASIGYPRIPVVWGIHHSTLDVAATKPLTRLTQRACALSSRFMPSRIVCCSESARAAHVMAG
YSPSKMLVIPNGFDLGRFHRDTAARAAFRASLEIPQSAHLVGVVARWDPNKDHRSFVAAATEVANRLPTATFALCGDGIT
WDNAPLSSMIDATRQRGRFILLGARSDMPQLMASLDVLCLSSTSEGFPNVIGEAMAAETPCVVTDCGDCAAIVGDAGRVV
APRDPKALAGALLELLSLDVDVRRRLGVRARERIATLFSLRSVAQRYENVYREVVATDVQKTSHC

Sequences:

>Translated_385_residues
MLTILHLITGLRRGGAEAMLLKLLSASDRSSFQHVVVSLTSGGPLATEIGALGVRVESLDMTPGIPSLRALSSLRSIMRK
ERPHVLQSWMYHADLLAGLASIGYPRIPVVWGIHHSTLDVAATKPLTRLTQRACALSSRFMPSRIVCCSESARAAHVMAG
YSPSKMLVIPNGFDLGRFHRDTAARAAFRASLEIPQSAHLVGVVARWDPNKDHRSFVAAATEVANRLPTATFALCGDGIT
WDNAPLSSMIDATRQRGRFILLGARSDMPQLMASLDVLCLSSTSEGFPNVIGEAMAAETPCVVTDCGDCAAIVGDAGRVV
APRDPKALAGALLELLSLDVDVRRRLGVRARERIATLFSLRSVAQRYENVYREVVATDVQKTSHC
>Mature_385_residues
MLTILHLITGLRRGGAEAMLLKLLSASDRSSFQHVVVSLTSGGPLATEIGALGVRVESLDMTPGIPSLRALSSLRSIMRK
ERPHVLQSWMYHADLLAGLASIGYPRIPVVWGIHHSTLDVAATKPLTRLTQRACALSSRFMPSRIVCCSESARAAHVMAG
YSPSKMLVIPNGFDLGRFHRDTAARAAFRASLEIPQSAHLVGVVARWDPNKDHRSFVAAATEVANRLPTATFALCGDGIT
WDNAPLSSMIDATRQRGRFILLGARSDMPQLMASLDVLCLSSTSEGFPNVIGEAMAAETPCVVTDCGDCAAIVGDAGRVV
APRDPKALAGALLELLSLDVDVRRRLGVRARERIATLFSLRSVAQRYENVYREVVATDVQKTSHC

Specific function: May be involved in the production of the exopolysaccharide (EPS) component of the extracellular matrix during biofilm formation. EPS is responsible for the adhesion of chains of cells into bundles. Required for biofilm maintenance [H]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296 [H]

Pfam domain/function: PF00534 Glycos_transf_1 [H]

EC number: NA

Molecular weight: Translated: 41501; Mature: 41501

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTILHLITGLRRGGAEAMLLKLLSASDRSSFQHVVVSLTSGGPLATEIGALGVRVESLD
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCEEEEEEC
MTPGIPSLRALSSLRSIMRKERPHVLQSWMYHADLLAGLASIGYPRIPVVWGIHHSTLDV
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
AATKPLTRLTQRACALSSRFMPSRIVCCSESARAAHVMAGYSPSKMLVIPNGFDLGRFHR
HHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHEECCCCCEEEEECCCCCCHHHHH
DTAARAAFRASLEIPQSAHLVGVVARWDPNKDHRSFVAAATEVANRLPTATFALCGDGIT
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCC
WDNAPLSSMIDATRQRGRFILLGARSDMPQLMASLDVLCLSSTSEGFPNVIGEAMAAETP
CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCC
CVVTDCGDCAAIVGDAGRVVAPRDPKALAGALLELLSLDVDVRRRLGVRARERIATLFSL
EEEECCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHH
RSVAQRYENVYREVVATDVQKTSHC
HHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLTILHLITGLRRGGAEAMLLKLLSASDRSSFQHVVVSLTSGGPLATEIGALGVRVESLD
CHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCEEEEEEECCCCCHHHHHHHHCEEEEEEC
MTPGIPSLRALSSLRSIMRKERPHVLQSWMYHADLLAGLASIGYPRIPVVWGIHHSTLDV
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCHHHH
AATKPLTRLTQRACALSSRFMPSRIVCCSESARAAHVMAGYSPSKMLVIPNGFDLGRFHR
HHCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHEECCCCCEEEEECCCCCCHHHHH
DTAARAAFRASLEIPQSAHLVGVVARWDPNKDHRSFVAAATEVANRLPTATFALCGDGIT
HHHHHHHHHHHCCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHCCCHHEEEECCCCC
WDNAPLSSMIDATRQRGRFILLGARSDMPQLMASLDVLCLSSTSEGFPNVIGEAMAAETP
CCCCCHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHHHEECCCCCCCHHHHHHHHHCCCC
CVVTDCGDCAAIVGDAGRVVAPRDPKALAGALLELLSLDVDVRRRLGVRARERIATLFSL
EEEECCCCHHHHHCCCCCEECCCCCHHHHHHHHHHHHCCHHHHHHCCHHHHHHHHHHHHH
RSVAQRYENVYREVVATDVQKTSHC
HHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8969506; 9384377 [H]