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The map label for this gene is ycbL [C]

Identifier: 220919471

GI number: 220919471

Start: 4887021

End: 4888514

Strand: Direct

Name: ycbL [C]

Synonym: A2cp1_4392

Alternate gene names: 220919471

Gene position: 4887021-4888514 (Clockwise)

Preceding gene: 220919470

Following gene: 220919472

Centisome position: 97.17

GC content: 79.99

Gene sequence:

>1494_bases
ATGTCGATGACGTTCCCCGGGCTGCCCCCGCCGCCGCCGCCGCCCGAGCCGGTGCTGGCGACGGCGGTGGTGCTCCACCG
CGACGGGCCGCGCGGGCGCGAGGCGTTCCTGGTCCGGCGCGGGCGCGACCTCCGCTTCGCGGGCGGCTGGCACGCGTTCC
CGGGCGGCCGGCTCGACCCGGAGGACGCGCGCGTGCCGGTGGAGGGCGCGCAGGGCGAGGACGCGCGCCTAGTCGCCTGC
GCCGCGCGCGAGCTGTTCGAGGAGACCGGCGTGCTCGCCGCCCGCGGGCGCGAGCGGGTGCCGGCGGCGGCGCGCGAGGC
GGCCCGGCGCGCGCTCCTCGACGGGACGCTCGCGTTCGGCGACTTCCTCGCCGCGCACGGGCTCGGGCTCGAGGCGGCGG
CGTTCACGCCGGCCGGCCGCTGGGTGACGCCCGAGCACCTGCCGCTCCGCTACGACGCCCGGCTGTTCCTGCTGCCGCTC
CCGCCCGGCGAGGCGCCGGTGGTCTGGCCGGGCGAGCTCGCCGACGGCGCCATGGTCCCGGCCGCCGACGCGCTCGGCGC
CTGGGGCCGCGGCCAGATGCTGCTCCACCCGCCCAACCTGCACGCGCTGCGCGTGCTCGACCGCCCCGGGCCGATCGACC
TCGCCGCCCTGCGCGACCCGCCGCACCGCGACGGACCCATCTGCCGCCGCATCGAGTTCCAGCAGGGCTTCTTCCTCGCC
GCGCTGCGCACGCCCACGTTGCCGCCCGCCACGCACACCAACGCGTGGCTGCTCCCGGCGGAGGGCGGCCTCGCGGTGGT
GGACCCCGGCGCGCCGGATCCCGCCGAGCAGGCGGTGCTGTTCGGGCTGCTCGACGCGCTCGCCGCCGAGCGGCTCCCGC
CGCGCGAGATCTGGCTCACCCACGCGCACCCGGATCACGTCGGCGCGGTGGCGGCGCTCTCGGCGCGGTACGGGCTGCCG
GTGCGGGCGCACCCGCTCGCGGCGGGCCGCGCCGGCGCGCCGGTGGAGCCGCTCGGCGAGGGCGACCGGATCGGCGACGG
CGGCCGCTTCCGGGTGCTGGAGACGCCCGGCCACGCGCGCGAGCACCTCGCCTTCCTCGACGAGCGGAGCGGGGCGCTCG
TGTGCGGCGACCTGGTGAGCACGCTCTCCACCATCGTGATCGACCCGCCCGAGGGCGACATGGCCGAGTACGAGCGGCAG
CTCGCGCGGGTGGAGGCGCTCGGGCCGCGCACGATCTACCCGGCGCACGGGCCGCCCGCGCCGGACGCGGTGGGGAAGCT
CGCCGCGTACCGGGGCCACCGGCGGGAGCGCGAGGCGCTGGTGGTGGCGGCGCTCGCGGCGGGCGGGACGCTCGCCGAGA
TCACCGCGCGGGCGTACGCGGACACGCCCGCGCCGCTCCACCCGGTCGCGGCGCGGAGCTGCCTCGCGGTGCTGGAGAAG
CTGCGGGGGGCCTCCCGCGCGGAGGAGGCAGGCGGGGTGTGGCGGGCGCGGTGA

Upstream 100 bases:

>100_bases
GTGTTCCTCGCCCCCGAGGGCCCCAAGGTGTTCGCGAAGATCCAGCGCGAGCTGGTCCGGATCTGATCGCGCCGCGCCCC
GCGCGGCCGGAGGGCCGGCG

Downstream 100 bases:

>100_bases
CGGCCGGCCGGGCGCGCCACAGGGGACCCGTCGGATTTCCGAGCGGAAGTCCGCAGAAAGCCGGTATCGGCTGTGTCGCT
CCAGACACCAACAGCCGGCA

Product: beta-lactamase domain-containing protein

Products: NA

Alternate protein names: Beta-Lactamase Domain Protein; Metallo-Beta-Lactamase Family Protein; Hydrolase; NUDIX Hydrolase; Metallo-Beta-Lactamase Superfamily Protein; Beta-Lactamase-Like; Beta-Lactamase-Like Protein; Beta-Lactamase Family Protein; Hydroxyacylglutathione Hydrolase; Hydrolase Protein; Zn-Dependent Hydrolase Glyoxylase; Zinc-Dependent Hydrolase; Hydrolase/Glyoxylase; NUDIX Family Hydrolase; Zn-Dependent Hydrolase; Metallo-Beta-Lactamase Family Hydrolase; Nudix Hydrolase; Metallo-Beta-Lactamase Domain Protein; NUDIX HydrolaseBeta-Lactamase-Like; Nudix Superfamily Hydrolase; Beta-Lactamase-Like Hydrolase; NUDIX Family Protein

Number of amino acids: Translated: 497; Mature: 496

Protein sequence:

>497_residues
MSMTFPGLPPPPPPPEPVLATAVVLHRDGPRGREAFLVRRGRDLRFAGGWHAFPGGRLDPEDARVPVEGAQGEDARLVAC
AARELFEETGVLAARGRERVPAAAREAARRALLDGTLAFGDFLAAHGLGLEAAAFTPAGRWVTPEHLPLRYDARLFLLPL
PPGEAPVVWPGELADGAMVPAADALGAWGRGQMLLHPPNLHALRVLDRPGPIDLAALRDPPHRDGPICRRIEFQQGFFLA
ALRTPTLPPATHTNAWLLPAEGGLAVVDPGAPDPAEQAVLFGLLDALAAERLPPREIWLTHAHPDHVGAVAALSARYGLP
VRAHPLAAGRAGAPVEPLGEGDRIGDGGRFRVLETPGHAREHLAFLDERSGALVCGDLVSTLSTIVIDPPEGDMAEYERQ
LARVEALGPRTIYPAHGPPAPDAVGKLAAYRGHRREREALVVAALAAGGTLAEITARAYADTPAPLHPVAARSCLAVLEK
LRGASRAEEAGGVWRAR

Sequences:

>Translated_497_residues
MSMTFPGLPPPPPPPEPVLATAVVLHRDGPRGREAFLVRRGRDLRFAGGWHAFPGGRLDPEDARVPVEGAQGEDARLVAC
AARELFEETGVLAARGRERVPAAAREAARRALLDGTLAFGDFLAAHGLGLEAAAFTPAGRWVTPEHLPLRYDARLFLLPL
PPGEAPVVWPGELADGAMVPAADALGAWGRGQMLLHPPNLHALRVLDRPGPIDLAALRDPPHRDGPICRRIEFQQGFFLA
ALRTPTLPPATHTNAWLLPAEGGLAVVDPGAPDPAEQAVLFGLLDALAAERLPPREIWLTHAHPDHVGAVAALSARYGLP
VRAHPLAAGRAGAPVEPLGEGDRIGDGGRFRVLETPGHAREHLAFLDERSGALVCGDLVSTLSTIVIDPPEGDMAEYERQ
LARVEALGPRTIYPAHGPPAPDAVGKLAAYRGHRREREALVVAALAAGGTLAEITARAYADTPAPLHPVAARSCLAVLEK
LRGASRAEEAGGVWRAR
>Mature_496_residues
SMTFPGLPPPPPPPEPVLATAVVLHRDGPRGREAFLVRRGRDLRFAGGWHAFPGGRLDPEDARVPVEGAQGEDARLVACA
ARELFEETGVLAARGRERVPAAAREAARRALLDGTLAFGDFLAAHGLGLEAAAFTPAGRWVTPEHLPLRYDARLFLLPLP
PGEAPVVWPGELADGAMVPAADALGAWGRGQMLLHPPNLHALRVLDRPGPIDLAALRDPPHRDGPICRRIEFQQGFFLAA
LRTPTLPPATHTNAWLLPAEGGLAVVDPGAPDPAEQAVLFGLLDALAAERLPPREIWLTHAHPDHVGAVAALSARYGLPV
RAHPLAAGRAGAPVEPLGEGDRIGDGGRFRVLETPGHAREHLAFLDERSGALVCGDLVSTLSTIVIDPPEGDMAEYERQL
ARVEALGPRTIYPAHGPPAPDAVGKLAAYRGHRREREALVVAALAAGGTLAEITARAYADTPAPLHPVAARSCLAVLEKL
RGASRAEEAGGVWRAR

Specific function: Unknown

COG id: COG0491

COG function: function code R; Zn-dependent hydrolases, including glyoxylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI7705793, Length=235, Percent_Identity=28.5106382978723, Blast_Score=87, Evalue=3e-17,
Organism=Escherichia coli, GI1787158, Length=175, Percent_Identity=32, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193205216, Length=236, Percent_Identity=27.9661016949153, Blast_Score=94, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17537503, Length=236, Percent_Identity=27.9661016949153, Blast_Score=93, Evalue=3e-19,
Organism=Drosophila melanogaster, GI20129357, Length=265, Percent_Identity=27.9245283018868, Blast_Score=96, Evalue=6e-20,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52638; Mature: 52507

Theoretical pI: Translated: 6.66; Mature: 6.66

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTFPGLPPPPPPPEPVLATAVVLHRDGPRGREAFLVRRGRDLRFAGGWHAFPGGRLDP
CCCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCH
EDARVPVEGAQGEDARLVACAARELFEETGVLAARGRERVPAAAREAARRALLDGTLAFG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCHHHHH
DFLAAHGLGLEAAAFTPAGRWVTPEHLPLRYDARLFLLPLPPGEAPVVWPGELADGAMVP
HHHHHCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEECCCCCCCCCCC
AADALGAWGRGQMLLHPPNLHALRVLDRPGPIDLAALRDPPHRDGPICRRIEFQQGFFLA
CHHHHCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEE
ALRTPTLPPATHTNAWLLPAEGGLAVVDPGAPDPAEQAVLFGLLDALAAERLPPREIWLT
EECCCCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEE
HAHPDHVGAVAALSARYGLPVRAHPLAAGRAGAPVEPLGEGDRIGDGGRFRVLETPGHAR
ECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
EHLAFLDERSGALVCGDLVSTLSTIVIDPPEGDMAEYERQLARVEALGPRTIYPAHGPPA
HHHHHHHCCCCCEEEHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCC
PDAVGKLAAYRGHRREREALVVAALAAGGTLAEITARAYADTPAPLHPVAARSCLAVLEK
HHHHHHHHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LRGASRAEEAGGVWRAR
HHCCCHHHHHCCCCCCC
>Mature Secondary Structure 
SMTFPGLPPPPPPPEPVLATAVVLHRDGPRGREAFLVRRGRDLRFAGGWHAFPGGRLDP
CCCCCCCCCCCCCCCCHHEEEEEEECCCCCCCCEEEEECCCCEEEECCEECCCCCCCCH
EDARVPVEGAQGEDARLVACAARELFEETGVLAARGRERVPAAAREAARRALLDGTLAFG
HHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEECCCCCCCCHHHHHHHHHHHHHCHHHHH
DFLAAHGLGLEAAAFTPAGRWVTPEHLPLRYDARLFLLPLPPGEAPVVWPGELADGAMVP
HHHHHCCCCCCCEEECCCCCCCCCCCCCEEECCEEEEEECCCCCCCEEECCCCCCCCCCC
AADALGAWGRGQMLLHPPNLHALRVLDRPGPIDLAALRDPPHRDGPICRRIEFQQGFFLA
CHHHHCCCCCCCEEEECCCCEEEEEECCCCCEEEEECCCCCCCCCCCEEEEECCCCEEEE
ALRTPTLPPATHTNAWLLPAEGGLAVVDPGAPDPAEQAVLFGLLDALAAERLPPREIWLT
EECCCCCCCCCCCCEEEEECCCCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCCHHEEEE
HAHPDHVGAVAALSARYGLPVRAHPLAAGRAGAPVEPLGEGDRIGDGGRFRVLETPGHAR
ECCCCHHHHHHHHHHHCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCHH
EHLAFLDERSGALVCGDLVSTLSTIVIDPPEGDMAEYERQLARVEALGPRTIYPAHGPPA
HHHHHHHCCCCCEEEHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHCCCCEEECCCCCCC
PDAVGKLAAYRGHRREREALVVAALAAGGTLAEITARAYADTPAPLHPVAARSCLAVLEK
HHHHHHHHHHHCCCHHHHEEEEEEECCCCHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHH
LRGASRAEEAGGVWRAR
HHCCCHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA