| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220919320
Identifier: 220919320
GI number: 220919320
Start: 4723288
End: 4725039
Strand: Direct
Name: 220919320
Synonym: A2cp1_4241
Alternate gene names: NA
Gene position: 4723288-4725039 (Clockwise)
Preceding gene: 220919319
Following gene: 220919321
Centisome position: 93.91
GC content: 72.37
Gene sequence:
>1752_bases ATGCGCAAGATCGCTCAGGAATCCTCCACCCCGGCGCCCGGCGCGGCGGGCGCGCCGCACCGCGAGCTGACCGTCCGCGC CGTGGGAGTCGCCATCGTGGTGGCCGCCATCATGGGCGCGGCCGAGCCGACGGTGGTGCTCCGCATCGGCTACGGCCCGA ACATCTCGGTGGTGAGCGCGTTCCTCGGCTTCATCGTGCTCTCGCTGCTCGGCGTCTTCACCCGCGTGCGCGCCACGCGC TGGGAGACGAACCTGGTGCAGACCGCCGGCACCGCCGCCGGCTCGGGCGTGGGCTTCATGTCGGTGGTGCTCGCGGCCAT CGACATGCTGAACCAGCGCGGCCTGCTCGACCTGCACCTCAGCCCGCTGCAGATCTTCGCGTGGCTCGCGCCGTCCGGCC TGCTCGGCGTGCTGCTCGCGGTGCCGCTGCGCAAGCACTACATCGACCAGGAGAACCTCACCTTCGCCGACGGCACCGCC GCCGGCGAGACGCTGCTCGTGCTCGACCAGGGGCGCAAGCAGGCGGGGCCGCGCGTGGCGGCGCTCGGGATCGGCGGCGC CATCTCGGCCGGCTTCGTGGCGCTGCGCCAGGGCCTGGGCTGGATCCCGGAGACGATCGCGTTCCGCTTCCTCACCCCGC ACGCCGAGGCGCTCCGCGTCGGCTCGGAGCTGGGCGTGCTCTCGCTCGGCGCCGGCCTCCTCATCGGCCTGCGGGTCACG CTCTCGATGGGCCTCGGCCTCGTCCTCGCCTGGCTGGTCGCACCCGAGCCGCTGTTCCGGGCCGGGCTGGTGCCGGAGCT CACCTTCAACGCCGTGCTGCAGCGCTGGATCATGTGGCCGGCCACCGGGCTGATGGTGGCCGGCGGCCTCGCCGCGCTGG TGCTGAAGTGGAAGGTGATCGCGAAGACGTTCCGCGGGATGTCGGCCAAGGGCGCCGGCGACGGCGGCGACTTCCCCATG CGCTGGGTGGTGTGGGGCGCGATCGCCTGCACGGTGGCGCTGGTGGTGGTGCAGAAGATCTCGCTCGGCTTCCCCATCTG GCTGTCGCTCGTGTCGGTGGGGCTCTCGCTCATCCTGATGCTGGTCGGCATCCGCGTGCTGGGCGAGACGAACTGGGCGC CCATCAGCGCCATGGCGAACGTGATGCAGGCGGTGTTCGCGGTGCTCGCGCCGGGCCACGTGCCCATCAACATGGTGGGC TCCGGGATGAGCGGCTCGGTGGCCGCGAACGGCGAGCACCTGATGCAGGACTACCGGGCCGGCAAGATCGTCGGCTCCAC CAACCGGAACCTCACCATCCTGCAGCTCGTCGGCGTGCCGGTGGGCGCGCTGGCGGTCGCGGTCGCCTACCCGGCGGTGC GGGCCAAGTACGGCGTGGGCGGCGAGGGCGGCCTCACCTCGCCGATCAGCGTGAAGTGGGCCGGGTTCGCCGAGCTCCTC TCGCAGGGCTTCGGAGCGCTCGCGCCGAGCGCCGTCGCCGCGCTCGGCATCGCGCTGGTGCTGGGCGTGGTCCTCACCGT GCTCGAGTCGAACCCGCGCTTCGGCCGGTTCGTGCCCTCCCCCACCGCGGTCGGCCTCGGGATGCTCATCCCCGGCTTCG CCATCTTCCCCATGGTGGTGGGCGGCCTCATCCAGGATCTCTGGAAGCGGCTCTCGCCGCGGACCGAGGGGATCTACAAC ACCCCGCTCGCGTCCGGCTTCATCACCGGGGAGGCGCTGGTGCTGCTGGTGCTGGCGCTCCTGGCGCTGTGA
Upstream 100 bases:
>100_bases GGCCGGCGATGTGACGCGAGGACGGCGTCCCTTCGGCGCGGGACCCGTCGCCTCCGGGTCGATTGGCCGGTCGGCGCCCT CGCGCTAGAGTCTCCGGCCC
Downstream 100 bases:
>100_bases TGGCCGGCCCTGCGAAGCGGATGCGGCGCGCCGACCTCGAGCGCGAGCGCTCCCGGGCCCGCGGCGCGCGGCGGCTCCTC CCGTGGGCGGTCGCCAGCGC
Product: oligopeptide transporter, OPT superfamily
Products: NA
Alternate protein names: Oligopeptide Transporter OPT Superfamily; Oligopeptide Transporter Opt Superfamily Protein; Oligopeptide Transporter OPT Family; OPT Superfamily Oligopeptide Transporter; Integral Membrane Protein; Oligopeptide Transporter Opt Family
Number of amino acids: Translated: 583; Mature: 583
Protein sequence:
>583_residues MRKIAQESSTPAPGAAGAPHRELTVRAVGVAIVVAAIMGAAEPTVVLRIGYGPNISVVSAFLGFIVLSLLGVFTRVRATR WETNLVQTAGTAAGSGVGFMSVVLAAIDMLNQRGLLDLHLSPLQIFAWLAPSGLLGVLLAVPLRKHYIDQENLTFADGTA AGETLLVLDQGRKQAGPRVAALGIGGAISAGFVALRQGLGWIPETIAFRFLTPHAEALRVGSELGVLSLGAGLLIGLRVT LSMGLGLVLAWLVAPEPLFRAGLVPELTFNAVLQRWIMWPATGLMVAGGLAALVLKWKVIAKTFRGMSAKGAGDGGDFPM RWVVWGAIACTVALVVVQKISLGFPIWLSLVSVGLSLILMLVGIRVLGETNWAPISAMANVMQAVFAVLAPGHVPINMVG SGMSGSVAANGEHLMQDYRAGKIVGSTNRNLTILQLVGVPVGALAVAVAYPAVRAKYGVGGEGGLTSPISVKWAGFAELL SQGFGALAPSAVAALGIALVLGVVLTVLESNPRFGRFVPSPTAVGLGMLIPGFAIFPMVVGGLIQDLWKRLSPRTEGIYN TPLASGFITGEALVLLVLALLAL
Sequences:
>Translated_583_residues MRKIAQESSTPAPGAAGAPHRELTVRAVGVAIVVAAIMGAAEPTVVLRIGYGPNISVVSAFLGFIVLSLLGVFTRVRATR WETNLVQTAGTAAGSGVGFMSVVLAAIDMLNQRGLLDLHLSPLQIFAWLAPSGLLGVLLAVPLRKHYIDQENLTFADGTA AGETLLVLDQGRKQAGPRVAALGIGGAISAGFVALRQGLGWIPETIAFRFLTPHAEALRVGSELGVLSLGAGLLIGLRVT LSMGLGLVLAWLVAPEPLFRAGLVPELTFNAVLQRWIMWPATGLMVAGGLAALVLKWKVIAKTFRGMSAKGAGDGGDFPM RWVVWGAIACTVALVVVQKISLGFPIWLSLVSVGLSLILMLVGIRVLGETNWAPISAMANVMQAVFAVLAPGHVPINMVG SGMSGSVAANGEHLMQDYRAGKIVGSTNRNLTILQLVGVPVGALAVAVAYPAVRAKYGVGGEGGLTSPISVKWAGFAELL SQGFGALAPSAVAALGIALVLGVVLTVLESNPRFGRFVPSPTAVGLGMLIPGFAIFPMVVGGLIQDLWKRLSPRTEGIYN TPLASGFITGEALVLLVLALLAL >Mature_583_residues MRKIAQESSTPAPGAAGAPHRELTVRAVGVAIVVAAIMGAAEPTVVLRIGYGPNISVVSAFLGFIVLSLLGVFTRVRATR WETNLVQTAGTAAGSGVGFMSVVLAAIDMLNQRGLLDLHLSPLQIFAWLAPSGLLGVLLAVPLRKHYIDQENLTFADGTA AGETLLVLDQGRKQAGPRVAALGIGGAISAGFVALRQGLGWIPETIAFRFLTPHAEALRVGSELGVLSLGAGLLIGLRVT LSMGLGLVLAWLVAPEPLFRAGLVPELTFNAVLQRWIMWPATGLMVAGGLAALVLKWKVIAKTFRGMSAKGAGDGGDFPM RWVVWGAIACTVALVVVQKISLGFPIWLSLVSVGLSLILMLVGIRVLGETNWAPISAMANVMQAVFAVLAPGHVPINMVG SGMSGSVAANGEHLMQDYRAGKIVGSTNRNLTILQLVGVPVGALAVAVAYPAVRAKYGVGGEGGLTSPISVKWAGFAELL SQGFGALAPSAVAALGIALVLGVVLTVLESNPRFGRFVPSPTAVGLGMLIPGFAIFPMVVGGLIQDLWKRLSPRTEGIYN TPLASGFITGEALVLLVLALLAL
Specific function: Unknown
COG id: COG1297
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Saccharomyces cerevisiae, GI6321324, Length=418, Percent_Identity=24.4019138755981, Blast_Score=80, Evalue=7e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 60350; Mature: 60350
Theoretical pI: Translated: 10.65; Mature: 10.65
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRKIAQESSTPAPGAAGAPHRELTVRAVGVAIVVAAIMGAAEPTVVLRIGYGPNISVVSA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH FLGFIVLSLLGVFTRVRATRWETNLVQTAGTAAGSGVGFMSVVLAAIDMLNQRGLLDLHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC SPLQIFAWLAPSGLLGVLLAVPLRKHYIDQENLTFADGTAAGETLLVLDQGRKQAGPRVA CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEE ALGIGGAISAGFVALRQGLGWIPETIAFRFLTPHAEALRVGSELGVLSLGAGLLIGLRVT EEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH LSMGLGLVLAWLVAPEPLFRAGLVPELTFNAVLQRWIMWPATGLMVAGGLAALVLKWKVI HHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AKTFRGMSAKGAGDGGDFPMRWVVWGAIACTVALVVVQKISLGFPIWLSLVSVGLSLILM HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVGIRVLGETNWAPISAMANVMQAVFAVLAPGHVPINMVGSGMSGSVAANGEHLMQDYRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHC GKIVGSTNRNLTILQLVGVPVGALAVAVAYPAVRAKYGVGGEGGLTSPISVKWAGFAELL CCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH SQGFGALAPSAVAALGIALVLGVVLTVLESNPRFGRFVPSPTAVGLGMLIPGFAIFPMVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GGLIQDLWKRLSPRTEGIYNTPLASGFITGEALVLLVLALLAL HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC >Mature Secondary Structure MRKIAQESSTPAPGAAGAPHRELTVRAVGVAIVVAAIMGAAEPTVVLRIGYGPNISVVSA CCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHH FLGFIVLSLLGVFTRVRATRWETNLVQTAGTAAGSGVGFMSVVLAAIDMLNQRGLLDLHL HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCCCCEEECC SPLQIFAWLAPSGLLGVLLAVPLRKHYIDQENLTFADGTAAGETLLVLDQGRKQAGPRVA CHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEEEECCCCCCCCEEE ALGIGGAISAGFVALRQGLGWIPETIAFRFLTPHAEALRVGSELGVLSLGAGLLIGLRVT EEECCHHHHHHHHHHHHCCCCCCHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHHHHH LSMGLGLVLAWLVAPEPLFRAGLVPELTFNAVLQRWIMWPATGLMVAGGLAALVLKWKVI HHHHHHHHHHHHHCCCHHHHCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH AKTFRGMSAKGAGDGGDFPMRWVVWGAIACTVALVVVQKISLGFPIWLSLVSVGLSLILM HHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHH LVGIRVLGETNWAPISAMANVMQAVFAVLAPGHVPINMVGSGMSGSVAANGEHLMQDYRA HHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCCHHHHHHHHHC GKIVGSTNRNLTILQLVGVPVGALAVAVAYPAVRAKYGVGGEGGLTSPISVKWAGFAELL CCEEECCCCCEEEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEHHHHHHHH SQGFGALAPSAVAALGIALVLGVVLTVLESNPRFGRFVPSPTAVGLGMLIPGFAIFPMVV HCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH GGLIQDLWKRLSPRTEGIYNTPLASGFITGEALVLLVLALLAL HHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA