| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220919234
Identifier: 220919234
GI number: 220919234
Start: 4641111
End: 4641650
Strand: Direct
Name: 220919234
Synonym: A2cp1_4155
Alternate gene names: NA
Gene position: 4641111-4641650 (Clockwise)
Preceding gene: 220919233
Following gene: 220919243
Centisome position: 92.28
GC content: 79.07
Gene sequence:
>540_bases GTGGCCGCCCCCGCCCCGCTCCTCGCCCTCGCGCTGGCGCTCGCCGCCGGCGGCCCGGGGGGTGCGCCGCCGGTGCCGGT GGCACCCTCGCGGCAGGGCACGCTCGACGCCCGGCGCGAGGCGATCGCGCAGGAGCTGCTTCGGATCGGTGGCGCGCTCC AGCGCGAGATCGAGGCCGGCGACGTGGGCGCGGTCCTGGCGCGCGTGCCGGCCGAGGGGCTGCGCTGCGCCGGGCAGGTG GTGCCGCGCGCGCGGGTGGAGCGCGACCTGCGCGAGTCGTCGCGCTGGCTGCACCAGACGCTGTTCGGCGCGCCCGAGGG CGCCGGCGGCGGCGCGCCCGCGAGCCTGCGCGCGTTCCTGGCGCGGGCGAAGGAGGTCGCGGTGATGGTCAGCTTTCGCC GCGACCCGCGCGCCGGCCCGGTGGGCCGGCCCTGCCTCGAGTTCCGCGCCCGCGACCTGGTGAACCCTGCCCCGCCGTTC TGCTTCGAGAAGCAGGGCAAGCGCTGGTGGCTCACCGAGTCGCTGTATCCGTGCGGCTGA
Upstream 100 bases:
>100_bases ATCACCGGCTCTGGAACGGACCCCTCGAGGCCCACCTGCTGAAGTACGAGCTCCCGTGACCTCCTTGCGGAGCGCCGGAC GCCGCGCCTAACGTTCCCGC
Downstream 100 bases:
>100_bases CGTCCCTCGACTCCGCGCGGCCGTTCGGCCGCGCTACGCTCGGGATGAGCGACCTCCATCCGCTCACCCTGAGCGTAGGC GGGCCGCAGGCCCGCCGGAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 179; Mature: 178
Protein sequence:
>179_residues MAAPAPLLALALALAAGGPGGAPPVPVAPSRQGTLDARREAIAQELLRIGGALQREIEAGDVGAVLARVPAEGLRCAGQV VPRARVERDLRESSRWLHQTLFGAPEGAGGGAPASLRAFLARAKEVAVMVSFRRDPRAGPVGRPCLEFRARDLVNPAPPF CFEKQGKRWWLTESLYPCG
Sequences:
>Translated_179_residues MAAPAPLLALALALAAGGPGGAPPVPVAPSRQGTLDARREAIAQELLRIGGALQREIEAGDVGAVLARVPAEGLRCAGQV VPRARVERDLRESSRWLHQTLFGAPEGAGGGAPASLRAFLARAKEVAVMVSFRRDPRAGPVGRPCLEFRARDLVNPAPPF CFEKQGKRWWLTESLYPCG >Mature_178_residues AAPAPLLALALALAAGGPGGAPPVPVAPSRQGTLDARREAIAQELLRIGGALQREIEAGDVGAVLARVPAEGLRCAGQVV PRARVERDLRESSRWLHQTLFGAPEGAGGGAPASLRAFLARAKEVAVMVSFRRDPRAGPVGRPCLEFRARDLVNPAPPFC FEKQGKRWWLTESLYPCG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18917; Mature: 18786
Theoretical pI: Translated: 10.55; Mature: 10.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAPAPLLALALALAAGGPGGAPPVPVAPSRQGTLDARREAIAQELLRIGGALQREIEAG CCCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DVGAVLARVPAEGLRCAGQVVPRARVERDLRESSRWLHQTLFGAPEGAGGGAPASLRAFL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ARAKEVAVMVSFRRDPRAGPVGRPCLEFRARDLVNPAPPFCFEKQGKRWWLTESLYPCG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC >Mature Secondary Structure AAPAPLLALALALAAGGPGGAPPVPVAPSRQGTLDARREAIAQELLRIGGALQREIEAG CCCHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC DVGAVLARVPAEGLRCAGQVVPRARVERDLRESSRWLHQTLFGAPEGAGGGAPASLRAFL HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHH ARAKEVAVMVSFRRDPRAGPVGRPCLEFRARDLVNPAPPFCFEKQGKRWWLTESLYPCG HHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA