| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is ttuD [H]
Identifier: 220919192
GI number: 220919192
Start: 4598204
End: 4599496
Strand: Direct
Name: ttuD [H]
Synonym: A2cp1_4112
Alternate gene names: 220919192
Gene position: 4598204-4599496 (Clockwise)
Preceding gene: 220919189
Following gene: 220919193
Centisome position: 91.43
GC content: 82.68
Gene sequence:
>1293_bases GTGAGCGCGCGCAGACCGCTCGCGGCCGCCTGCGAGGCGGTGTACCGCGCCGCCCTGGCGCGCACCGCCGCCGCGCGCCT GGTGACGGAGGCGCTGGCGCGCGAGGCGCTCCCGCCCGGTCCGGTGCGCGTGGCGGCGCTCGGCAAGGCCGCCGCGCCCA TGCTGGAGGCGGCGCTGGCCGCGCTCCGCGGGCGCGCGCGCGATCCGCTCTGCGTGCTGCCCGAGGGCGCGCGGCCGCCG ATGGCGCCGGGCGCCCGCTGCATCGCCGCAGGCCACCCGCGGCCCACCGCCGGCTCGCTCGAGGCGGGACGGGCGCTCCT CGACTGGGCGGGCGCGGGCGCCGGCGCGCCGGCGCTGGTCTTGCTCTCCGGCGGCGGCAGCGCGCTGGCGGTGGCGCCCG CGGAGGGCGTCGCGGCGGAGGAGAAGGCGGAGGCGATCGCCGCGCTCATGCGCGCCGGCCTCACGATCCAGGCGCTGAAC GCGGTGCGCAAGCACCTCTCGCGGCTGAAGGGCGGCCACCTCGGCGCGCGGCTCGCGCCCGCCGACGTCCGCGTGCTGGT GCTCTCCGACGTGCCCGGCGACGACCTCTCGGTGATCGCCTCCGGCCCGCTCGCGCCGGATCCGAGCACGTTCGGCGAGG CGCTCGCGGCGGTGCACGGCGCCGGCGCGGCCCTGCCGGACGCGGTGCGGGCGCGGCTCGAGGCGGGCGCGCGCGGCGCC GTGCCGGAGACGCCGAAGCCGGGCGACCCGCGCCTCGCCGGCGTGCGGCACCGGCTGCTCGCCGGCCCGGTGGACCTGGC GCGCGCCGCCGCGGACGTGGCGCGCGAAATGGGGATGGAGGCGGCGGTCGACCCGGTCCCGCTCACCGGCGACGTGGTGG CGGTGGCGGCGCGGCTGGCGCTCTGGGCGCGCGAGCGGGCGGCCCGGCCCGGCGCGCGCGGGCCGCGGCTGCTCGCGCTC GGCGGCGAGCCCACCATCCGCGTCCCGGCCGCCGCGGCCGCGCCCGAGGGCGGGCGGGCGCAGCACCTGGCGCTCCTCGC CGCCGCCGGCCTGGACGGCCTGCCGGCGGCGCTGCTCGCGGCCGGCTCCGACGGGCGCGACGGGCCCACCGGACAGGCGG GCGCGGTGGTGGACGGCGAGAGCGCGGGCGAGGCGACGCGGCGCGGGATCGACCTGGCCCGGGCGCTCGCCGAGGCCCGC TCCGGCCCCGCCGCGGTGGCGCTCGGCGCCGCCATCCCGCGCTTCGAGACCGGGACGCACCTGTGCGACCTGGTGCTGGT CGCGGTGGAGTGA
Upstream 100 bases:
>100_bases CTACCGCGCGAGCGACCCCCCGCAACGCGGCTCGGCCGTCCCATGTCGGCGCGGCGGGGACAAAGTGTGCGCAGGGCGGA CCGCCCGGAGGGCGCCGCGC
Downstream 100 bases:
>100_bases CAGCGCCTCCCGTTCGCGTGGGGCCCGTCGCGAGGCACACGGTGGCGTCGCCGAGCCGGGCACACGAGGACCGAGCAGCG CAGGCGTTCCCGTCGGCACG
Product: MOFRL domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 430; Mature: 429
Protein sequence:
>430_residues MSARRPLAAACEAVYRAALARTAAARLVTEALAREALPPGPVRVAALGKAAAPMLEAALAALRGRARDPLCVLPEGARPP MAPGARCIAAGHPRPTAGSLEAGRALLDWAGAGAGAPALVLLSGGGSALAVAPAEGVAAEEKAEAIAALMRAGLTIQALN AVRKHLSRLKGGHLGARLAPADVRVLVLSDVPGDDLSVIASGPLAPDPSTFGEALAAVHGAGAALPDAVRARLEAGARGA VPETPKPGDPRLAGVRHRLLAGPVDLARAAADVAREMGMEAAVDPVPLTGDVVAVAARLALWARERAARPGARGPRLLAL GGEPTIRVPAAAAAPEGGRAQHLALLAAAGLDGLPAALLAAGSDGRDGPTGQAGAVVDGESAGEATRRGIDLARALAEAR SGPAAVALGAAIPRFETGTHLCDLVLVAVE
Sequences:
>Translated_430_residues MSARRPLAAACEAVYRAALARTAAARLVTEALAREALPPGPVRVAALGKAAAPMLEAALAALRGRARDPLCVLPEGARPP MAPGARCIAAGHPRPTAGSLEAGRALLDWAGAGAGAPALVLLSGGGSALAVAPAEGVAAEEKAEAIAALMRAGLTIQALN AVRKHLSRLKGGHLGARLAPADVRVLVLSDVPGDDLSVIASGPLAPDPSTFGEALAAVHGAGAALPDAVRARLEAGARGA VPETPKPGDPRLAGVRHRLLAGPVDLARAAADVAREMGMEAAVDPVPLTGDVVAVAARLALWARERAARPGARGPRLLAL GGEPTIRVPAAAAAPEGGRAQHLALLAAAGLDGLPAALLAAGSDGRDGPTGQAGAVVDGESAGEATRRGIDLARALAEAR SGPAAVALGAAIPRFETGTHLCDLVLVAVE >Mature_429_residues SARRPLAAACEAVYRAALARTAAARLVTEALAREALPPGPVRVAALGKAAAPMLEAALAALRGRARDPLCVLPEGARPPM APGARCIAAGHPRPTAGSLEAGRALLDWAGAGAGAPALVLLSGGGSALAVAPAEGVAAEEKAEAIAALMRAGLTIQALNA VRKHLSRLKGGHLGARLAPADVRVLVLSDVPGDDLSVIASGPLAPDPSTFGEALAAVHGAGAALPDAVRARLEAGARGAV PETPKPGDPRLAGVRHRLLAGPVDLARAAADVAREMGMEAAVDPVPLTGDVVAVAARLALWARERAARPGARGPRLLALG GEPTIRVPAAAAAPEGGRAQHLALLAAAGLDGLPAALLAAGSDGRDGPTGQAGAVVDGESAGEATRRGIDLARALAEARS GPAAVALGAAIPRFETGTHLCDLVLVAVE
Specific function: Degrades an unidentified toxic product from the first step of tartrate degradation [H]
COG id: COG2379
COG function: function code G; Putative glycerate kinase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI31543063, Length=359, Percent_Identity=34.8189415041783, Blast_Score=119, Evalue=5e-27, Organism=Caenorhabditis elegans, GI193205461, Length=371, Percent_Identity=26.6846361185984, Blast_Score=106, Evalue=2e-23, Organism=Drosophila melanogaster, GI19920578, Length=399, Percent_Identity=30.0751879699248, Blast_Score=92, Evalue=5e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007835 [H]
Pfam domain/function: PF05161 MOFRL [H]
EC number: =1.1.1.81 [H]
Molecular weight: Translated: 42463; Mature: 42332
Theoretical pI: Translated: 9.04; Mature: 9.04
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSARRPLAAACEAVYRAALARTAAARLVTEALAREALPPGPVRVAALGKAAAPMLEAALA CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHH ALRGRARDPLCVLPEGARPPMAPGARCIAAGHPRPTAGSLEAGRALLDWAGAGAGAPALV HHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHCHHHHHHCCCCCCCCEEE LLSGGGSALAVAPAEGVAAEEKAEAIAALMRAGLTIQALNAVRKHLSRLKGGHLGARLAP EEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECC ADVRVLVLSDVPGDDLSVIASGPLAPDPSTFGEALAAVHGAGAALPDAVRARLEAGARGA CCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC VPETPKPGDPRLAGVRHRLLAGPVDLARAAADVAREMGMEAAVDPVPLTGDVVAVAARLA CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHH LWARERAARPGARGPRLLALGGEPTIRVPAAAAAPEGGRAQHLALLAAAGLDGLPAALLA HHHHHHHCCCCCCCCEEEEECCCCCEECCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHC AGSDGRDGPTGQAGAVVDGESAGEATRRGIDLARALAEARSGPAAVALGAAIPRFETGTH CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCHH LCDLVLVAVE HEEEEEEECC >Mature Secondary Structure SARRPLAAACEAVYRAALARTAAARLVTEALAREALPPGPVRVAALGKAAAPMLEAALA CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEHHCHHHHHHHHHHHH ALRGRARDPLCVLPEGARPPMAPGARCIAAGHPRPTAGSLEAGRALLDWAGAGAGAPALV HHHCCCCCCEEECCCCCCCCCCCCCEEEECCCCCCCCCCHHHCHHHHHHCCCCCCCCEEE LLSGGGSALAVAPAEGVAAEEKAEAIAALMRAGLTIQALNAVRKHLSRLKGGHLGARLAP EEECCCCEEEEECCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCEECC ADVRVLVLSDVPGDDLSVIASGPLAPDPSTFGEALAAVHGAGAALPDAVRARLEAGARGA CCEEEEEEECCCCCCCEEEECCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCC VPETPKPGDPRLAGVRHRLLAGPVDLARAAADVAREMGMEAAVDPVPLTGDVVAVAARLA CCCCCCCCCCCHHHHHHHHHHCHHHHHHHHHHHHHHCCCHHCCCCCCCCCHHHHHHHHHH LWARERAARPGARGPRLLALGGEPTIRVPAAAAAPEGGRAQHLALLAAAGLDGLPAALLA HHHHHHHCCCCCCCCEEEEECCCCCEECCCHHCCCCCCCHHHHHHHHHCCCCCCCHHHHC AGSDGRDGPTGQAGAVVDGESAGEATRRGIDLARALAEARSGPAAVALGAAIPRFETGTH CCCCCCCCCCCCCCCEECCCCCCHHHHHHHHHHHHHHHHCCCCCEEEHHCCCCCCCCCHH LCDLVLVAVE HEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 7592429 [H]