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The map label for this gene is fecI [C]

Identifier: 220919099

GI number: 220919099

Start: 4475365

End: 4476306

Strand: Direct

Name: fecI [C]

Synonym: A2cp1_4018

Alternate gene names: 220919099

Gene position: 4475365-4476306 (Clockwise)

Preceding gene: 220919098

Following gene: 220919101

Centisome position: 88.99

GC content: 74.42

Gene sequence:

>942_bases
ATGAGCTCGATGAGCACGACCTCGAATCCGGCGGAGCGCTTCGAGCCGCACCGCGGCCGCCTGCTCGGCCTCGCCTACCG
CATGCTCGGCTCGATGGCCGACGCCACCGACGCGGTGCAGGAGACCTACCTGCGCTGGCACGCGGCCGAGCGCGAGGAGG
TGGAGGACGCGCGCGCGTTCCTCATCACCACGACGACGCGCATCTGCCTCGACCTGCTGACCTCAGCGCGCGCACGGCGC
GAGGCGTACGTCGGTCCATGGCTCCCGGAGCCGGTCCTCGACACGGCGGCGCTCGCGCCGGACGCGCACACCGAGCTCGC
CGAGGATCTGTCGGTCGCGTTGCTCCTGACGCTCGACCGGCTGTCGCCGCTCGAGCGCAGCGCCTTCCTGCTGCACGACG
TGTTCGACCTGTCGTTCGCCGAGATCGCCCGGGCGCTGGAGCGAAGCGAGGCTGCGTGCCGGCAGCTCGCCTCCCGCGCC
CGGGCGCGCGTTCGCGCGGCACGACCGCGCGTCGCGACCGAGCCGGCGGCGCCTCCAGGCACGGTGGACTCGAAGCACGC
GCAGCTCATGGCCGCGTTCGCGGCCGCGGCGCAGGCGGGCGACGTGGATGCGCTGATGCGGCTGCTCGCGGCGGACGTGC
GCGTGGTGACGGACGGCGGCGGCAAGGTGCCGGCGGCGCTGGACGTGGTCGAGGGCGCCGACCGCGCGGCGCGCTTCCTG
GTCGGGGCCACGCGCAAGCGCCCGGGCCAGTGGTGGCGCGAGGACTTCACGGTGCGCTTCGCGATCGTGAACGGCCTGCC
GGGCGTGGTGGTGGACGGCTCGGACGGACCGGTGCAGACGTCGGCGTTCGAGATCGAGGACGGCGTCATCCGGGCGCTCT
ACGTCGTCCGGAATCCGGACAAGCTGCGGCACCTGGCGGGCGCGGCTGCGCCGGGCACCTGA

Upstream 100 bases:

>100_bases
CTGGAGCGGTCGTGGCGGTCGTGGTGGGACTCATCGGCATGGCCCTCGGTGGGTTGGCGCTGGCTCGTACGCGGCGCCGC
ATACCCGGCCGCGAGATGAC

Downstream 100 bases:

>100_bases
TGACCGACGGCGGCGGCGACCGGGGCGCCTGGATCCGGGCGGACCTCACGACGCCGCCCGCTCCGTGGTGAGCGCGCCCC
CGACCACCACCCGCCCGCCG

Product: ECF subfamily RNA polymerase sigma-24 subunit

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma Factor SigJ; ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase ECF-Subfamily Sigma Factor; Sigma Factor; Sigma-; RNA Polymerase Sigma-70 Factor ECF Subfamily; ECF Subfamily RNA Polymerase Sigma Factor; RNA Polymerase Sigma Factor; ECF-Sigma Factor; RNA Polymerase Sigma-70 Factor; RNA Polymerase Sigma Factor Sigma-70 Family Protein; Sigma-70 Region 2 Domain-Containing Protein; Sigma Factor Sigma; ECF Family RNA Polymerase Sigma Factor; RNA Polymerase; Sigma-70 Factor; RNA Polymerase ECF-Type Sigma Factor; ECF-Family Protein RNA Polymerase Sigma Factor; ECF Sigma Factor; AlteRNAtive RNA Polymerase Sigma Factor SigJ; RNA Polymerase Sigma Factor Sigma-70 Family; Sigma-70 Family RNA Polymerase; RNA Polymerase Sigma-24 Factor Protein; RNA Polymerase Sigma Subunit ECF Family; RNA Polymerase Sigma-24 Subunit; RNA Polymerase Sigma-70 Factor Family; ECF-Type Sigma Factor; RNA Polymerase Sigma-70 ECF Type; RNA Polymerase Sigma-70 Factor Protein; DNA-Directed RNA Polymeracialized Sigma Subunit; RNA Polymerase Sigma Subunit; AlteRNAtive RNA Polymerase Sigma Factor; RNA Polymerase ECF-Type Sigma Factor SigJ; Sigma-70 Family RNA Polymerase Sigma Factor; ECF Subfamily RNA Polymerase Sigma-

Number of amino acids: Translated: 313; Mature: 312

Protein sequence:

>313_residues
MSSMSTTSNPAERFEPHRGRLLGLAYRMLGSMADATDAVQETYLRWHAAEREEVEDARAFLITTTTRICLDLLTSARARR
EAYVGPWLPEPVLDTAALAPDAHTELAEDLSVALLLTLDRLSPLERSAFLLHDVFDLSFAEIARALERSEAACRQLASRA
RARVRAARPRVATEPAAPPGTVDSKHAQLMAAFAAAAQAGDVDALMRLLAADVRVVTDGGGKVPAALDVVEGADRAARFL
VGATRKRPGQWWREDFTVRFAIVNGLPGVVVDGSDGPVQTSAFEIEDGVIRALYVVRNPDKLRHLAGAAAPGT

Sequences:

>Translated_313_residues
MSSMSTTSNPAERFEPHRGRLLGLAYRMLGSMADATDAVQETYLRWHAAEREEVEDARAFLITTTTRICLDLLTSARARR
EAYVGPWLPEPVLDTAALAPDAHTELAEDLSVALLLTLDRLSPLERSAFLLHDVFDLSFAEIARALERSEAACRQLASRA
RARVRAARPRVATEPAAPPGTVDSKHAQLMAAFAAAAQAGDVDALMRLLAADVRVVTDGGGKVPAALDVVEGADRAARFL
VGATRKRPGQWWREDFTVRFAIVNGLPGVVVDGSDGPVQTSAFEIEDGVIRALYVVRNPDKLRHLAGAAAPGT
>Mature_312_residues
SSMSTTSNPAERFEPHRGRLLGLAYRMLGSMADATDAVQETYLRWHAAEREEVEDARAFLITTTTRICLDLLTSARARRE
AYVGPWLPEPVLDTAALAPDAHTELAEDLSVALLLTLDRLSPLERSAFLLHDVFDLSFAEIARALERSEAACRQLASRAR
ARVRAARPRVATEPAAPPGTVDSKHAQLMAAFAAAAQAGDVDALMRLLAADVRVVTDGGGKVPAALDVVEGADRAARFLV
GATRKRPGQWWREDFTVRFAIVNGLPGVVVDGSDGPVQTSAFEIEDGVIRALYVVRNPDKLRHLAGAAAPGT

Specific function: Sigma Factors Are Initiation Factors That Promote The Attachment Of RNA Polymerase To Specific Initiation Sites And Are Then Released. This Sigma Factor Regulates The Fec Genes For Iron Dicitrate Transport (Probable). [C]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33756; Mature: 33624

Theoretical pI: Translated: 5.99; Mature: 5.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSMSTTSNPAERFEPHRGRLLGLAYRMLGSMADATDAVQETYLRWHAAEREEVEDARAF
CCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LITTTTRICLDLLTSARARREAYVGPWLPEPVLDTAALAPDAHTELAEDLSVALLLTLDR
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LSPLERSAFLLHDVFDLSFAEIARALERSEAACRQLASRARARVRAARPRVATEPAAPPG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TVDSKHAQLMAAFAAAAQAGDVDALMRLLAADVRVVTDGGGKVPAALDVVEGADRAARFL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCHHHHHHHH
VGATRKRPGQWWREDFTVRFAIVNGLPGVVVDGSDGPVQTSAFEIEDGVIRALYVVRNPD
HHHCCCCCCHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCEEECCCCCEEEHHEECCHH
KLRHLAGAAAPGT
HHHHHHCCCCCCC
>Mature Secondary Structure 
SSMSTTSNPAERFEPHRGRLLGLAYRMLGSMADATDAVQETYLRWHAAEREEVEDARAF
CCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEE
LITTTTRICLDLLTSARARREAYVGPWLPEPVLDTAALAPDAHTELAEDLSVALLLTLDR
EEHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
LSPLERSAFLLHDVFDLSFAEIARALERSEAACRQLASRARARVRAARPRVATEPAAPPG
CCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCC
TVDSKHAQLMAAFAAAAQAGDVDALMRLLAADVRVVTDGGGKVPAALDVVEGADRAARFL
CCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCEEEECCCCCCCHHHHHHHCHHHHHHHH
VGATRKRPGQWWREDFTVRFAIVNGLPGVVVDGSDGPVQTSAFEIEDGVIRALYVVRNPD
HHHCCCCCCHHHHHCCEEEEEEECCCCCEEEECCCCCCCCCEEECCCCCEEEHHEECCHH
KLRHLAGAAAPGT
HHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA