| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220919049
Identifier: 220919049
GI number: 220919049
Start: 4419330
End: 4420976
Strand: Direct
Name: 220919049
Synonym: A2cp1_3966
Alternate gene names: NA
Gene position: 4419330-4420976 (Clockwise)
Preceding gene: 220919042
Following gene: 220919055
Centisome position: 87.87
GC content: 70.07
Gene sequence:
>1647_bases ATGCTCGACCACCGCAAGACCGCCCCCGCCGCGCTCGCCGCGGCAGCCCTCGTCCTCTCCCTGCCCGGCGCGGCCGACGC CTGCACCAGCATCCTGGTCTCGAAGGGCGCGAGCGCGGACGGCTCCACCTTCATCACCTACGCTGCGGACTCGCACGACC TCTACGGCGACCTCCCGCTCCGCCCCGCCGCGCAGCACGCGCCGGGCGCGCAGCGCGAGATCATCGAATGGGACACGGGC AAGTTCCTGGGCCGCATCCCGCAGCCGGCCGTCACCTACCACGTGGTCGGCAACATCAACGAGCACCAGGTCGCCATCGG CGAGACCACCTTCACCGGCCGCAAGGAGCTGCAGGATCCCGAGGGCCGGGTGGACTACGGCTCGCTCATGTACATCGCGC TGGAGCGCGCCCGCACCGCGCGCGAGGCGATCCAGGTGATGACCGACGTCGTGGCCGAGTACGGCTACGCCTCCACCGGC GAGTCCTTCTCCATCTCGGATCCGAACGAGGCCTGGATCCTCGAGATGATCGGCAAGGGGCCGAAGCGGAAGGGCGCGGT GTGGGTGGCCCGCCGCATCCCGGACGGCTACGTGTCGGCGCACGCGAACCACGCCCGCATCCGCCAGTTCCCGCTCGACG AGCCGAAGACCACGCTCTACGCGAAGGACGTCATCTCGTTCGCCCGCGAGAAGGGCTGGTTCAAGGGGAAGGACGCCGAG TTCAGCTTCGCCGACACCTACGCGCCGCTCGACTTCGGCGCGCTGCGCGCCTGCGACGCGCGGGTGTGGAGCGTGTTCCG CCGGGTGGCGCCGGGGCAGCCGCTGCCGTCCTCGATGGTGAAGGGCCAGGACCCGAAGGCCGAGCGCGTGCCGCTGTGGG TGAAGGCAGAGAAGCCGCTCGCGGTGCGCGACGTGATGGCGCTCATGCGCGACCACTTCGAGGGCACCGAGCTCGACCTG TCGAAGGGCGTGGGCGCCGGCCCGTTCTCGCTGCCGTACCGCTGGCGGCCCATGACGTTCAAGGTGGACGACCAGGAGTA CCTGAACGGGCGGGCCATCTCGACGCAGCAGACCGGCTTTTCGTTCGTGGCGCAGTCGCGCGCCGCGCTGCCGGCGGCGG TGGGCGGGGTGCTCTGGTTCGGCGTGGACGACACGTACAGCACCGTCTACGTGCCGATGTACTGCTCCATCCACGAGGTG CCGCGCAGCTTCGCGGTGGGCACCGCCGACTTCAAGACGTTCAGCTGGGACTCGGCGTTCTGGGTGTTCAACTTCGTGTC GAACTGGGCCTACTCGCGCTACTCCGACATGATCCAGGACGTGAAGCAGGTGCAGGGCGAGCTGGAAGGCGGGTTCCTCT CGCGGCAGGCGGAGCTGGAGAAGGCCGCCCTGACCCTCTACAAGGACTCGCCCGGCCTGGCCCGCGACTACCTCACCCGC TACTCGGTCAGCCAGGGCGACCTGGTCACGGCGCGCTGGCGCAAGCTGGGCGAGTCGCTGATGGTGAAGTACCTCGACGG CAACGTGCGCGACGCGCAGGGCAACGTCACGCACCCGGACTACCCGGAGGCCTGGCGCCGGCGCATCGCGGCCGAGGACG ACGGCATCCTGCGGGTGCCGAAGGAGCCGCAGAAGGTGGCGCAGTAG
Upstream 100 bases:
>100_bases CCGCCGCGGCGCGGCAAGCTCGCCGGAACCACGGCCCGGTCGAGGCGAGGCCTGGCCGCGGAGTGACCCGGAGGAGCGGG CTCGGGTATCCTCGGCGGCC
Downstream 100 bases:
>100_bases TCTCCGCGGACCGCTCGCCCTTCGACTCCACCGCTCATCCCGAGCGTAGGCCGGGCCCCTCGACTCCGGGCCGCTCCGCG GCCCTACGCTCGGGGTGAGC
Product: peptidase U34 dipeptidase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 548; Mature: 548
Protein sequence:
>548_residues MLDHRKTAPAALAAAALVLSLPGAADACTSILVSKGASADGSTFITYAADSHDLYGDLPLRPAAQHAPGAQREIIEWDTG KFLGRIPQPAVTYHVVGNINEHQVAIGETTFTGRKELQDPEGRVDYGSLMYIALERARTAREAIQVMTDVVAEYGYASTG ESFSISDPNEAWILEMIGKGPKRKGAVWVARRIPDGYVSAHANHARIRQFPLDEPKTTLYAKDVISFAREKGWFKGKDAE FSFADTYAPLDFGALRACDARVWSVFRRVAPGQPLPSSMVKGQDPKAERVPLWVKAEKPLAVRDVMALMRDHFEGTELDL SKGVGAGPFSLPYRWRPMTFKVDDQEYLNGRAISTQQTGFSFVAQSRAALPAAVGGVLWFGVDDTYSTVYVPMYCSIHEV PRSFAVGTADFKTFSWDSAFWVFNFVSNWAYSRYSDMIQDVKQVQGELEGGFLSRQAELEKAALTLYKDSPGLARDYLTR YSVSQGDLVTARWRKLGESLMVKYLDGNVRDAQGNVTHPDYPEAWRRRIAAEDDGILRVPKEPQKVAQ
Sequences:
>Translated_548_residues MLDHRKTAPAALAAAALVLSLPGAADACTSILVSKGASADGSTFITYAADSHDLYGDLPLRPAAQHAPGAQREIIEWDTG KFLGRIPQPAVTYHVVGNINEHQVAIGETTFTGRKELQDPEGRVDYGSLMYIALERARTAREAIQVMTDVVAEYGYASTG ESFSISDPNEAWILEMIGKGPKRKGAVWVARRIPDGYVSAHANHARIRQFPLDEPKTTLYAKDVISFAREKGWFKGKDAE FSFADTYAPLDFGALRACDARVWSVFRRVAPGQPLPSSMVKGQDPKAERVPLWVKAEKPLAVRDVMALMRDHFEGTELDL SKGVGAGPFSLPYRWRPMTFKVDDQEYLNGRAISTQQTGFSFVAQSRAALPAAVGGVLWFGVDDTYSTVYVPMYCSIHEV PRSFAVGTADFKTFSWDSAFWVFNFVSNWAYSRYSDMIQDVKQVQGELEGGFLSRQAELEKAALTLYKDSPGLARDYLTR YSVSQGDLVTARWRKLGESLMVKYLDGNVRDAQGNVTHPDYPEAWRRRIAAEDDGILRVPKEPQKVAQ >Mature_548_residues MLDHRKTAPAALAAAALVLSLPGAADACTSILVSKGASADGSTFITYAADSHDLYGDLPLRPAAQHAPGAQREIIEWDTG KFLGRIPQPAVTYHVVGNINEHQVAIGETTFTGRKELQDPEGRVDYGSLMYIALERARTAREAIQVMTDVVAEYGYASTG ESFSISDPNEAWILEMIGKGPKRKGAVWVARRIPDGYVSAHANHARIRQFPLDEPKTTLYAKDVISFAREKGWFKGKDAE FSFADTYAPLDFGALRACDARVWSVFRRVAPGQPLPSSMVKGQDPKAERVPLWVKAEKPLAVRDVMALMRDHFEGTELDL SKGVGAGPFSLPYRWRPMTFKVDDQEYLNGRAISTQQTGFSFVAQSRAALPAAVGGVLWFGVDDTYSTVYVPMYCSIHEV PRSFAVGTADFKTFSWDSAFWVFNFVSNWAYSRYSDMIQDVKQVQGELEGGFLSRQAELEKAALTLYKDSPGLARDYLTR YSVSQGDLVTARWRKLGESLMVKYLDGNVRDAQGNVTHPDYPEAWRRRIAAEDDGILRVPKEPQKVAQ
Specific function: Unknown
COG id: COG4690
COG function: function code E; Dipeptidase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C69 family [H]
Homologues:
Organism=Homo sapiens, GI302058287, Length=172, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=6e-15, Organism=Homo sapiens, GI38504671, Length=172, Percent_Identity=32.5581395348837, Blast_Score=80, Evalue=7e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR005322 [H]
Pfam domain/function: PF03577 Peptidase_C69 [H]
EC number: NA
Molecular weight: Translated: 60716; Mature: 60716
Theoretical pI: Translated: 6.87; Mature: 6.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLDHRKTAPAALAAAALVLSLPGAADACTSILVSKGASADGSTFITYAADSHDLYGDLPL CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC RPAAQHAPGAQREIIEWDTGKFLGRIPQPAVTYHVVGNINEHQVAIGETTFTGRKELQDP CCCCCCCCCCCCCEEECCCCHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHCCCC EGRVDYGSLMYIALERARTAREAIQVMTDVVAEYGYASTGESFSISDPNEAWILEMIGKG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCC PKRKGAVWVARRIPDGYVSAHANHARIRQFPLDEPKTTLYAKDVISFAREKGWFKGKDAE CCCCCCEEEEEECCCCHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC FSFADTYAPLDFGALRACDARVWSVFRRVAPGQPLPSSMVKGQDPKAERVPLWVKAEKPL CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCH AVRDVMALMRDHFEGTELDLSKGVGAGPFSLPYRWRPMTFKVDDQEYLNGRAISTQQTGF HHHHHHHHHHHCCCCCCEEHHCCCCCCCCCCCEEECCEEEEECCHHHCCCCEEECCCCCH SFVAQSRAALPAAVGGVLWFGVDDTYSTVYVPMYCSIHEVPRSFAVGTADFKTFSWDSAF HHHHHHHHCCHHHHCCEEEEECCCCCCEEEEEEEEEHHHCCHHHCCCCCCCEEECCCCHH WVFNFVSNWAYSRYSDMIQDVKQVQGELEGGFLSRQAELEKAALTLYKDSPGLARDYLTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHH YSVSQGDLVTARWRKLGESLMVKYLDGNVRDAQGNVTHPDYPEAWRRRIAAEDDGILRVP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECC KEPQKVAQ CCHHHHCC >Mature Secondary Structure MLDHRKTAPAALAAAALVLSLPGAADACTSILVSKGASADGSTFITYAADSHDLYGDLPL CCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCC RPAAQHAPGAQREIIEWDTGKFLGRIPQPAVTYHVVGNINEHQVAIGETTFTGRKELQDP CCCCCCCCCCCCCEEECCCCHHHHCCCCCCEEEEEECCCCCCEEEECCCCCCCHHHCCCC EGRVDYGSLMYIALERARTAREAIQVMTDVVAEYGYASTGESFSISDPNEAWILEMIGKG CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHCCC PKRKGAVWVARRIPDGYVSAHANHARIRQFPLDEPKTTLYAKDVISFAREKGWFKGKDAE CCCCCCEEEEEECCCCHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCC FSFADTYAPLDFGALRACDARVWSVFRRVAPGQPLPSSMVKGQDPKAERVPLWVKAEKPL CEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCEEEECCCCH AVRDVMALMRDHFEGTELDLSKGVGAGPFSLPYRWRPMTFKVDDQEYLNGRAISTQQTGF HHHHHHHHHHHCCCCCCEEHHCCCCCCCCCCCEEECCEEEEECCHHHCCCCEEECCCCCH SFVAQSRAALPAAVGGVLWFGVDDTYSTVYVPMYCSIHEVPRSFAVGTADFKTFSWDSAF HHHHHHHHCCHHHHCCEEEEECCCCCCEEEEEEEEEHHHCCHHHCCCCCCCEEECCCCHH WVFNFVSNWAYSRYSDMIQDVKQVQGELEGGFLSRQAELEKAALTLYKDSPGLARDYLTR HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHEEEEEECCCCHHHHHHHH YSVSQGDLVTARWRKLGESLMVKYLDGNVRDAQGNVTHPDYPEAWRRRIAAEDDGILRVP HCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCEEECC KEPQKVAQ CCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA