| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is groEL [H]
Identifier: 220918823
GI number: 220918823
Start: 4151757
End: 4153400
Strand: Direct
Name: groEL [H]
Synonym: A2cp1_3735
Alternate gene names: 220918823
Gene position: 4151757-4153400 (Clockwise)
Preceding gene: 220918822
Following gene: 220918824
Centisome position: 82.55
GC content: 67.64
Gene sequence:
>1644_bases ATGGCAGCCAAGGAAATCGTCTTCGACCAGAAGGCCCGCGACGCGATCCTCAAGGGCGTGAACACGCTCGCCGACGCGGT GAAGGTGACCCTCGGGCCGAAGGGCCGGAACGTGGTCATCGAGAAGAGCTTCGGCTCCCCGACCATCACCAAGGACGGCG TGACGGTCGCGAAGGAGATCGAGCTCGAGAACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAGGAGGTCGCCTCCAAG ACCTCCGACGTGGCCGGTGACGGCACCACCACCGCGACCGTGCTCGCCCAGGCCATCTACCGCGAGGGCTCGAAGCTCGT CGCGGCCGGCCACAACCCGATGGACGTGAAGCGCGGCATCGACAAGGCCGTCGAGGCCATCGTGGGCGAGCTGAAGAAGC TCTCCAAGCCGACGAAGGACCACAAGGAGATCGCCCAGGTCGGCATCATCTCCGCCAACGGCGACACCACCATCGGCAAC ATCATCGCCGAGGCGATGGAGAAGGTCGGCAAGGAGGGCGTCATCACCGTCGAGGAGGCCAAGGGCCTCGAGACGACGCT CGACGTGGTCGAGGGCATGCAGTTCGACCGCGGCTACCTCTCGCCGTACTTCGTGACCGACGCGGAGCGCATGGAGGCGG TCCTCGAGGACGCCTACATCCTCATCAACGAGAAGAAGATCTCGAACATGAAGGACCTGCTCCCGCTGCTGGAGCAGATC GCGCGCTCGGGCAAGCCGCTCATCATCGTGGCCGAGGAGGTCGAGGGTGAGGCGCTGGCGACGCTGGTCGTCAACAAGCT GCGCGGCACGCTGCACGTCTGCGCGGTGAAGGCCCCGGGCTTCGGCGACCGCCGCAAGGCCATGCTGGAGGACATCGCGA TCCTCACCGGCGGCCGCATGATCGCCGAGGAGCTCGGCCTCAAGCTCGAGCAGGTCACGCTGAAGGACCTCGGCCGCGCC AAGCGCGTCACGGTGGACAAGGACAACACCACCATCGTCGACGGCGCCGGCAAGAAGGAGGACATCGAGGCCCGGGTGAA GACCATCCGCGCGCAGATCGAGGAGACCACCTCCGACTACGACCGCGAGAAGCTCCAGGAGCGCCTCGCGAAGCTGGTGG GCGGCGTGGCGGTCATCAACGTCGGCGCGGCCACCGAGACCGAGATGAAGGAGAAGAAGGCCCGCGTCGAGGACGCGCTC CACGCGACCCGCGCGGCCGTCGAGGAGGGCATCGTCCCCGGCGGCGGCGTGGCGTACCTGCGCTGCGTGAAGGCGCTCGA GGGCGTGAAGGTGAACGAGGGCGAGAAGGTCGGCCTCGACATCGTCCGCCGCGCCATCGAGGAGCCGCTCCGCCAGATCT CCGGCAACGGCGGCTACGAGGGCTCGATCGTGGTGAACAAGGTGAAGGAGGCGAAGGAGGCCGCGTTCGGCTTCAACGCC GCCACGGGCGAGTACGAGGACCTGGTGAAGGCCGGCGTCATCGACCCGACCAAGGTCTCGCGCTCCGCGCTGCAGAACGC GGCGTCGGTCGCCTCGCTGATGCTCACCACCATGGCGATGGTCGCCGAGAAGCCGAAGGAGGAGGCTGCGGCCCCCGCCG GCGGCGGCATGGGCGGCATGGGCGGGATGGGCGGCATGATGTAG
Upstream 100 bases:
>100_bases CGACGGCGAGGAGCACCTGATCATGCGCGAGGAGGACATCCTCGGCGTGATCGAAGGCTAGCGCCCGCAGCCCCTCTCAC GGAACACGGAGCTCAAAGAC
Downstream 100 bases:
>100_bases GCCGTCCCGTCCTCCCGGACGGAACCGAGGGGTCGCCGGTGCGCCGGCGGCCCCTCTTCTTTTCGTGATGACGGCAGCTT CGCTCAGCGTGTGGACGCCG
Product: chaperonin GroEL
Products: NA
Alternate protein names: GroEL protein 2; Protein Cpn60 2 [H]
Number of amino acids: Translated: 547; Mature: 546
Protein sequence:
>547_residues MAAKEIVFDQKARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASK TSDVAGDGTTTATVLAQAIYREGSKLVAAGHNPMDVKRGIDKAVEAIVGELKKLSKPTKDHKEIAQVGIISANGDTTIGN IIAEAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTDAERMEAVLEDAYILINEKKISNMKDLLPLLEQI ARSGKPLIIVAEEVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVTLKDLGRA KRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDAL HATRAAVEEGIVPGGGVAYLRCVKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNA ATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEEAAAPAGGGMGGMGGMGGMM
Sequences:
>Translated_547_residues MAAKEIVFDQKARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASK TSDVAGDGTTTATVLAQAIYREGSKLVAAGHNPMDVKRGIDKAVEAIVGELKKLSKPTKDHKEIAQVGIISANGDTTIGN IIAEAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTDAERMEAVLEDAYILINEKKISNMKDLLPLLEQI ARSGKPLIIVAEEVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVTLKDLGRA KRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDAL HATRAAVEEGIVPGGGVAYLRCVKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNA ATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEEAAAPAGGGMGGMGGMGGMM >Mature_546_residues AAKEIVFDQKARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEIELENKFENMGAQMVKEVASKT SDVAGDGTTTATVLAQAIYREGSKLVAAGHNPMDVKRGIDKAVEAIVGELKKLSKPTKDHKEIAQVGIISANGDTTIGNI IAEAMEKVGKEGVITVEEAKGLETTLDVVEGMQFDRGYLSPYFVTDAERMEAVLEDAYILINEKKISNMKDLLPLLEQIA RSGKPLIIVAEEVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTGGRMIAEELGLKLEQVTLKDLGRAK RVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDYDREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALH ATRAAVEEGIVPGGGVAYLRCVKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNAA TGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEEAAAPAGGGMGGMGGMGGMM
Specific function: Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions [H]
COG id: COG0459
COG function: function code O; Chaperonin GroEL (HSP60 family)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the chaperonin (HSP60) family [H]
Homologues:
Organism=Homo sapiens, GI41399285, Length=528, Percent_Identity=52.4621212121212, Blast_Score=540, Evalue=1e-153, Organism=Homo sapiens, GI31542947, Length=528, Percent_Identity=52.4621212121212, Blast_Score=540, Evalue=1e-153, Organism=Homo sapiens, GI38455427, Length=116, Percent_Identity=34.4827586206897, Blast_Score=67, Evalue=5e-11, Organism=Escherichia coli, GI1790586, Length=531, Percent_Identity=67.4199623352166, Blast_Score=696, Evalue=0.0, Organism=Caenorhabditis elegans, GI17555558, Length=529, Percent_Identity=52.1739130434783, Blast_Score=544, Evalue=1e-155, Organism=Caenorhabditis elegans, GI193210679, Length=211, Percent_Identity=50.7109004739336, Blast_Score=209, Evalue=4e-54, Organism=Caenorhabditis elegans, GI17564182, Length=554, Percent_Identity=23.2851985559567, Blast_Score=69, Evalue=6e-12, Organism=Saccharomyces cerevisiae, GI6323288, Length=520, Percent_Identity=54.6153846153846, Blast_Score=546, Evalue=1e-156, Organism=Saccharomyces cerevisiae, GI6322524, Length=123, Percent_Identity=28.4552845528455, Blast_Score=65, Evalue=3e-11, Organism=Drosophila melanogaster, GI24641193, Length=528, Percent_Identity=53.7878787878788, Blast_Score=561, Evalue=1e-160, Organism=Drosophila melanogaster, GI24641191, Length=528, Percent_Identity=53.7878787878788, Blast_Score=561, Evalue=1e-160, Organism=Drosophila melanogaster, GI45550936, Length=528, Percent_Identity=50.9469696969697, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550132, Length=528, Percent_Identity=50.9469696969697, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI45550935, Length=528, Percent_Identity=50.9469696969697, Blast_Score=534, Evalue=1e-152, Organism=Drosophila melanogaster, GI17864606, Length=554, Percent_Identity=43.1407942238267, Blast_Score=453, Evalue=1e-127, Organism=Drosophila melanogaster, GI24584129, Length=527, Percent_Identity=36.2428842504744, Blast_Score=332, Evalue=5e-91, Organism=Drosophila melanogaster, GI19921262, Length=527, Percent_Identity=36.2428842504744, Blast_Score=332, Evalue=5e-91,
Paralogues:
None
Copy number: 2180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 360 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 480 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). 15012 Molecules/Cell In: Growth Phase,
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018370 - InterPro: IPR001844 - InterPro: IPR002423 [H]
Pfam domain/function: PF00118 Cpn60_TCP1 [H]
EC number: NA
Molecular weight: Translated: 58112; Mature: 57981
Theoretical pI: Translated: 5.22; Mature: 5.22
Prosite motif: PS00296 CHAPERONINS_CPN60
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAAKEIVFDQKARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEI CCCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHH ELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYREGSKLVAAGHNPMDVKRGI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH DKAVEAIVGELKKLSKPTKDHKEIAQVGIISANGDTTIGNIIAEAMEKVGKEGVITVEEA HHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCC KGLETTLDVVEGMQFDRGYLSPYFVTDAERMEAVLEDAYILINEKKISNMKDLLPLLEQI CCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHH ARSGKPLIIVAEEVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTGGRM HHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHH IAEELGLKLEQVTLKDLGRAKRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDY HHHHHCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYL HHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RCVKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC ATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEEAAAPAGGGMGGM CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC GGMGGMM CCCCCCC >Mature Secondary Structure AAKEIVFDQKARDAILKGVNTLADAVKVTLGPKGRNVVIEKSFGSPTITKDGVTVAKEI CCHHHHHHHHHHHHHHHHHHHHHHHHEEEECCCCCEEEEEECCCCCCCCCCCCHHHHHH ELENKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQAIYREGSKLVAAGHNPMDVKRGI HHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCEEEECCCCCHHHHHHH DKAVEAIVGELKKLSKPTKDHKEIAQVGIISANGDTTIGNIIAEAMEKVGKEGVITVEEA HHHHHHHHHHHHHHCCCCHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHCCCCEEEECCC KGLETTLDVVEGMQFDRGYLSPYFVTDAERMEAVLEDAYILINEKKISNMKDLLPLLEQI CCHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHCCEEEEECHHHCCHHHHHHHHHHH ARSGKPLIIVAEEVEGEALATLVVNKLRGTLHVCAVKAPGFGDRRKAMLEDIAILTGGRM HHCCCCEEEEEECCCCHHHHHHHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHHCCCHH IAEELGLKLEQVTLKDLGRAKRVTVDKDNTTIVDGAGKKEDIEARVKTIRAQIEETTSDY HHHHHCCCHHHHHHHHCCCCCEEEEECCCCEEEECCCCCHHHHHHHHHHHHHHHHHHHHH DREKLQERLAKLVGGVAVINVGAATETEMKEKKARVEDALHATRAAVEEGIVPGGGVAYL HHHHHHHHHHHHHCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHH RCVKALEGVKVNEGEKVGLDIVRRAIEEPLRQISGNGGYEGSIVVNKVKEAKEAAFGFNA HHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCC ATGEYEDLVKAGVIDPTKVSRSALQNAASVASLMLTTMAMVAEKPKEEAAAPAGGGMGGM CCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCCC GGMGGMM CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA