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The map label for this gene is yfbS [C]

Identifier: 220918676

GI number: 220918676

Start: 4003047

End: 4004876

Strand: Reverse

Name: yfbS [C]

Synonym: A2cp1_3584

Alternate gene names: 220918676

Gene position: 4004876-4003047 (Counterclockwise)

Preceding gene: 220918677

Following gene: 220918672

Centisome position: 79.63

GC content: 77.32

Gene sequence:

>1830_bases
GTGGCGGCGGCCCTGGTGCTCGGCACGGTGCTCCTCGCGCTGGTGCTCTTCTGGACCGAGTGGGTCCCGGTCGAGGTCAC
CTCGCTGCTCGTGGTGTGCCTGCTCGCGGCGACGCGCGTGCTCACGCCGAAGCAGGCGTTCTCGGGGTTCTCCGACGACA
CGGTGATCTTCATCTTCACGCTGCTCGCGATGACGCAGGGGCTCGCCGCCACCGGGGTGGTGAACGCGGTGGGGGAGCGG
CTCACCGTGCTCGGCCGGTTCGGCCCGGTCGCGTTCCTGGTCGCGCTGCTGGTCACCGTGGCCGCGTTCTCCGCCTTCGT
CTCGAACACCGTGACCGCCGCCGCGTTCCTCCCGGTGGCGGTGAGCGGCGCGCAGCGCGTCGGCCTGTCGAAGCGCGACG
TGCTCCTGCCCATGGCGTACGCCTCGATGCTGGGCGGCACGGTGCTCCTGTTCGGCACCTCCACCAACCTGGTGATGAGC
GCGGCCATGGCGCGCTCCGGGCTGGGGCGGATCGGGGTGGTGGAGCTCGCGCCGCTCGGGCTGCCCATCGCCGTGGTGGG
CATCGCGCTGGTCGCGCTGCTCGCGCGCCCCTTGCTCCGGCGCGGGGCGCGCCCGGTGGTGCCCGACGCGGTGCCGGAGC
GCGCCTACCTGTCGGAGGTGGCGGTGCCGGCGGGCTCGCCGCACGTGGGCCAGCCGCTCTCGGAGGTGGCGCCGACCATC
GGCGCGCGGCCGGTGGCGGTGGTGCGCCGGGGCGAGCCGCGGCCTCCCGACCCGGGGGCGGTGCTGGCGCCGGAGGACCG
CGTGGTGGTGGAGGGGCGCCGGGAGGAGATCGTCGAGGCCGCGGGCGCGCCCGGGGTGGCGCTCGGCACCGGCGGCACGC
CGCCCGGCGCCACGGCGGAGTCCGCGCCGGCGCGCGCGCCCGGCGCGCCGGACGCGCCGGTGGTGGTGGAGGCGTCGGTG
CCGCCCGGCTCGCGGCTGGCCGGCAAGGTGGTCGCCGACGCGGACCTCGGGGCGCAGCTCGGGCTGGAGGTGCTGGGCAT
CCACCGCCGCCCCGCCGTGCAGCGCCTCACCAAGCTGCAGCTCCTCGCGGGCGGCCGCCGCCGCGCCGCGTCCATCGCCG
CGCTCCCCATCGCCGCGGGCGACCTGCTGCTGCTGCGCGGCCTGCGGGAGCGCGTCCGCGCCCTCGCCGACGGCGGCGTG
CTCCTCGTCCTGAGCGGCGTGGACGCGGAGCCGCTGCGCCGGCGCAAGGCGCTGCTCGCGGCGGCGATCTTCCTCGGCGC
GCTGGCGGTGGGCACCGCCGGCCTGCTGCCCATGGCGGTGGCCGGGCTGGCCGGGCTGCTCGCGATGATCTTCACCGGCT
GCGTGGACGCGCGGCGTGCGCTGCGGGTGGACTGGCGCGTGGTGCTGCTGGTGGGGTCGATGCTTGCGCTCGGCCTCGCG
ATGGAGGCGAGCGGCGCGGGGCGGCTGCTCGGGGAGCGGCTGGCGGAGGCGGGGGCGGCGGCGGGCCCGCGCGGCGTGCT
GCTCGCGCTGGTGGTGCTCACCATCGTGCTCTCCGCGCCCATGAGCAACCAGGCCGCCGCGCTGGTGATGCTGCCCATCG
CCGTCGCCGCGGCGCACCGGCTCGGCGTGGACCCGCGCCCGTTCGCGATCGGCGTGACGCTGGCCGGCTCCTGCTCGTTC
GTGACCCCGCTCGAGCCGGCGTCGATGCTGGTCTACGGGGCGGGCCGGTACCGCTTCTCGGACTTCGTGCGCGTGGGGAC
CCCGCTCACGCTCGCGATCGTGGCGCTGCTCACCCTGGGCGTCCCGCTGATCTGGCCGTTCACGCGCTGA

Upstream 100 bases:

>100_bases
CTCGATCACGTGGTGGCGCTGGTGGTGCTCCAGTTCGTGCGCGACCGGAGCGCCGGCGACGCGGCCGCGCCCGCCGGCGC
GTGAGCGAGGGGGACGGCGC

Downstream 100 bases:

>100_bases
GCGGCGGCGCCCGGCCGGCCCACGGCGCGGCCTGCTCCACCTGCGCCGCGAGCCGGAACAGCGTCGCCTCGGCCCCGAAG
CGCCCCACCACCTGCACGCC

Product: TrkA-C domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MAAALVLGTVLLALVLFWTEWVPVEVTSLLVVCLLAATRVLTPKQAFSGFSDDTVIFIFTLLAMTQGLAATGVVNAVGER
LTVLGRFGPVAFLVALLVTVAAFSAFVSNTVTAAAFLPVAVSGAQRVGLSKRDVLLPMAYASMLGGTVLLFGTSTNLVMS
AAMARSGLGRIGVVELAPLGLPIAVVGIALVALLARPLLRRGARPVVPDAVPERAYLSEVAVPAGSPHVGQPLSEVAPTI
GARPVAVVRRGEPRPPDPGAVLAPEDRVVVEGRREEIVEAAGAPGVALGTGGTPPGATAESAPARAPGAPDAPVVVEASV
PPGSRLAGKVVADADLGAQLGLEVLGIHRRPAVQRLTKLQLLAGGRRRAASIAALPIAAGDLLLLRGLRERVRALADGGV
LLVLSGVDAEPLRRRKALLAAAIFLGALAVGTAGLLPMAVAGLAGLLAMIFTGCVDARRALRVDWRVVLLVGSMLALGLA
MEASGAGRLLGERLAEAGAAAGPRGVLLALVVLTIVLSAPMSNQAAALVMLPIAVAAAHRLGVDPRPFAIGVTLAGSCSF
VTPLEPASMLVYGAGRYRFSDFVRVGTPLTLAIVALLTLGVPLIWPFTR

Sequences:

>Translated_609_residues
MAAALVLGTVLLALVLFWTEWVPVEVTSLLVVCLLAATRVLTPKQAFSGFSDDTVIFIFTLLAMTQGLAATGVVNAVGER
LTVLGRFGPVAFLVALLVTVAAFSAFVSNTVTAAAFLPVAVSGAQRVGLSKRDVLLPMAYASMLGGTVLLFGTSTNLVMS
AAMARSGLGRIGVVELAPLGLPIAVVGIALVALLARPLLRRGARPVVPDAVPERAYLSEVAVPAGSPHVGQPLSEVAPTI
GARPVAVVRRGEPRPPDPGAVLAPEDRVVVEGRREEIVEAAGAPGVALGTGGTPPGATAESAPARAPGAPDAPVVVEASV
PPGSRLAGKVVADADLGAQLGLEVLGIHRRPAVQRLTKLQLLAGGRRRAASIAALPIAAGDLLLLRGLRERVRALADGGV
LLVLSGVDAEPLRRRKALLAAAIFLGALAVGTAGLLPMAVAGLAGLLAMIFTGCVDARRALRVDWRVVLLVGSMLALGLA
MEASGAGRLLGERLAEAGAAAGPRGVLLALVVLTIVLSAPMSNQAAALVMLPIAVAAAHRLGVDPRPFAIGVTLAGSCSF
VTPLEPASMLVYGAGRYRFSDFVRVGTPLTLAIVALLTLGVPLIWPFTR
>Mature_608_residues
AAALVLGTVLLALVLFWTEWVPVEVTSLLVVCLLAATRVLTPKQAFSGFSDDTVIFIFTLLAMTQGLAATGVVNAVGERL
TVLGRFGPVAFLVALLVTVAAFSAFVSNTVTAAAFLPVAVSGAQRVGLSKRDVLLPMAYASMLGGTVLLFGTSTNLVMSA
AMARSGLGRIGVVELAPLGLPIAVVGIALVALLARPLLRRGARPVVPDAVPERAYLSEVAVPAGSPHVGQPLSEVAPTIG
ARPVAVVRRGEPRPPDPGAVLAPEDRVVVEGRREEIVEAAGAPGVALGTGGTPPGATAESAPARAPGAPDAPVVVEASVP
PGSRLAGKVVADADLGAQLGLEVLGIHRRPAVQRLTKLQLLAGGRRRAASIAALPIAAGDLLLLRGLRERVRALADGGVL
LVLSGVDAEPLRRRKALLAAAIFLGALAVGTAGLLPMAVAGLAGLLAMIFTGCVDARRALRVDWRVVLLVGSMLALGLAM
EASGAGRLLGERLAEAGAAAGPRGVLLALVVLTIVLSAPMSNQAAALVMLPIAVAAAHRLGVDPRPFAIGVTLAGSCSFV
TPLEPASMLVYGAGRYRFSDFVRVGTPLTLAIVALLTLGVPLIWPFTR

Specific function: Unknown

COG id: COG0471

COG function: function code P; Di- and tricarboxylate transporters

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 RCK C-terminal domains [H]

Homologues:

Organism=Escherichia coli, GI1788629, Length=625, Percent_Identity=30.08, Blast_Score=196, Evalue=4e-51,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001898
- InterPro:   IPR006037 [H]

Pfam domain/function: PF00939 Na_sulph_symp; PF02080 TrkA_C [H]

EC number: NA

Molecular weight: Translated: 62014; Mature: 61882

Theoretical pI: Translated: 11.26; Mature: 11.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAALVLGTVLLALVLFWTEWVPVEVTSLLVVCLLAATRVLTPKQAFSGFSDDTVIFIFT
CHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
LLAMTQGLAATGVVNAVGERLTVLGRFGPVAFLVALLVTVAAFSAFVSNTVTAAAFLPVA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGAQRVGLSKRDVLLPMAYASMLGGTVLLFGTSTNLVMSAAMARSGLGRIGVVELAPLG
HCCHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
LPIAVVGIALVALLARPLLRRGARPVVPDAVPERAYLSEVAVPAGSPHVGQPLSEVAPTI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHC
GARPVAVVRRGEPRPPDPGAVLAPEDRVVVEGRREEIVEAAGAPGVALGTGGTPPGATAE
CCCCEEEEECCCCCCCCCCCEECCCCCEEECCHHHHHHHHCCCCCEEECCCCCCCCCCCC
SAPARAPGAPDAPVVVEASVPPGSRLAGKVVADADLGAQLGLEVLGIHRRPAVQRLTKLQ
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHCHHHCCCCCCHHHHHHHHHH
LLAGGRRRAASIAALPIAAGDLLLLRGLRERVRALADGGVLLVLSGVDAEPLRRRKALLA
HHHCCCHHHHHHEECHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
AAIFLGALAVGTAGLLPMAVAGLAGLLAMIFTGCVDARRALRVDWRVVLLVGSMLALGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEASGAGRLLGERLAEAGAAAGPRGVLLALVVLTIVLSAPMSNQAAALVMLPIAVAAAHR
HCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LGVDPRPFAIGVTLAGSCSFVTPLEPASMLVYGAGRYRFSDFVRVGTPLTLAIVALLTLG
CCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCC
VPLIWPFTR
CCCCCCCCC
>Mature Secondary Structure 
AAALVLGTVLLALVLFWTEWVPVEVTSLLVVCLLAATRVLTPKQAFSGFSDDTVIFIFT
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHH
LLAMTQGLAATGVVNAVGERLTVLGRFGPVAFLVALLVTVAAFSAFVSNTVTAAAFLPVA
HHHHHCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VSGAQRVGLSKRDVLLPMAYASMLGGTVLLFGTSTNLVMSAAMARSGLGRIGVVELAPLG
HCCHHHCCCCCCCHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHCCCCCCCEEEECCCC
LPIAVVGIALVALLARPLLRRGARPVVPDAVPERAYLSEVAVPAGSPHVGQPLSEVAPTI
CHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHC
GARPVAVVRRGEPRPPDPGAVLAPEDRVVVEGRREEIVEAAGAPGVALGTGGTPPGATAE
CCCCEEEEECCCCCCCCCCCEECCCCCEEECCHHHHHHHHCCCCCEEECCCCCCCCCCCC
SAPARAPGAPDAPVVVEASVPPGSRLAGKVVADADLGAQLGLEVLGIHRRPAVQRLTKLQ
CCCCCCCCCCCCCEEEEECCCCCCCCCCCEEECCCCCHHHCHHHCCCCCCHHHHHHHHHH
LLAGGRRRAASIAALPIAAGDLLLLRGLRERVRALADGGVLLVLSGVDAEPLRRRKALLA
HHHCCCHHHHHHEECHHCCHHHHHHHHHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHH
AAIFLGALAVGTAGLLPMAVAGLAGLLAMIFTGCVDARRALRVDWRVVLLVGSMLALGLA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
MEASGAGRLLGERLAEAGAAAGPRGVLLALVVLTIVLSAPMSNQAAALVMLPIAVAAAHR
HCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHH
LGVDPRPFAIGVTLAGSCSFVTPLEPASMLVYGAGRYRFSDFVRVGTPLTLAIVALLTLG
CCCCCCCEEEEEEEECCCCCCCCCCCCCEEEECCCCHHHHHHHHCCCCHHHHHHHHHHCC
VPLIWPFTR
CCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8905231 [H]