| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yneN [H]
Identifier: 220918629
GI number: 220918629
Start: 3953501
End: 3954049
Strand: Reverse
Name: yneN [H]
Synonym: A2cp1_3537
Alternate gene names: 220918629
Gene position: 3954049-3953501 (Counterclockwise)
Preceding gene: 220918632
Following gene: 220918626
Centisome position: 78.62
GC content: 77.78
Gene sequence:
>549_bases ATGCGCCGCCCCCCGCTCGCCGCCGCCCTGCTCGCGCTCGTCGCCGCCTGCGCCGCCCCGCGCACCCCGCAGCGCCCGAC CCCGCGCCCGCCGCCGGGCCCGTCGCGCCTGCTGGGCACCGAGGTGTCGTTCTCGGCGCCGGATCTCGCCGGCCGGGACG TCCAGGTGGGCGGCGCGGCGGCGCGCGGACGGGTGCAGGTGGTGGACTTCTGGGCGAGCTGGTGCGAGCCCTGCAAGGAA CAGCTCCCGCACCTCGACCGGCTGGCGCGGGAGCACGGCGAGGACGGCCTTCGGGTCACCGGCGTGGCGTTCGACGAGGA CCGGGCCGCGGTGGAGGCCTTCCTCGCGCCCGCCCCGGTCGCGTTCGAGATCCTCTGGGATCCGGGCGGGGCCGCCCTCG GCGACCGGCTCGACGTGCAGCGGCTGCCCACGACGCTCGTGATCGACCGTCGCGGGCTGGTGCGCCACGTCCACCGTGGC TACGACCGCGCCGAGGGAGAGAAGCTGGAGGAGGAGGTCAGGCTGCTCCTGGCGGAGCCGGCGCCCTGA
Upstream 100 bases:
>100_bases CGGCCGGTCACCTTGCGTGAACCACGCGGAGCGCAAGGGCGCGTTCACGGCCCGCGCGGCGTTCCGGGCGGGCCCTGATC GTCGCGCTTACAATCGGGGG
Downstream 100 bases:
>100_bases CCGCCGGCGGGGGCGCCTCCGGCAGCAGCGTGAAGCGGACCCGCTCGCGCTCGCGCTCCGCCTCCCCCGGCTCGGACGGC GACTCGCGCAGCCAGTACGC
Product: Redoxin domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 182
Protein sequence:
>182_residues MRRPPLAAALLALVAACAAPRTPQRPTPRPPPGPSRLLGTEVSFSAPDLAGRDVQVGGAAARGRVQVVDFWASWCEPCKE QLPHLDRLAREHGEDGLRVTGVAFDEDRAAVEAFLAPAPVAFEILWDPGGAALGDRLDVQRLPTTLVIDRRGLVRHVHRG YDRAEGEKLEEEVRLLLAEPAP
Sequences:
>Translated_182_residues MRRPPLAAALLALVAACAAPRTPQRPTPRPPPGPSRLLGTEVSFSAPDLAGRDVQVGGAAARGRVQVVDFWASWCEPCKE QLPHLDRLAREHGEDGLRVTGVAFDEDRAAVEAFLAPAPVAFEILWDPGGAALGDRLDVQRLPTTLVIDRRGLVRHVHRG YDRAEGEKLEEEVRLLLAEPAP >Mature_182_residues MRRPPLAAALLALVAACAAPRTPQRPTPRPPPGPSRLLGTEVSFSAPDLAGRDVQVGGAAARGRVQVVDFWASWCEPCKE QLPHLDRLAREHGEDGLRVTGVAFDEDRAAVEAFLAPAPVAFEILWDPGGAALGDRLDVQRLPTTLVIDRRGLVRHVHRG YDRAEGEKLEEEVRLLLAEPAP
Specific function: Involved In Disulfide Bond Formation. Catalyzes A Late, Reductive Step In The Assembly Of Periplasmic C-Type Cytochromes, Probably The Reduction Of Disulfide Bonds Of The Apocytochrome C To Allow Covalent Linkage With The Heme. Possible Subunit Of A Heme
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 thioredoxin domain [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000866 - InterPro: IPR005746 - InterPro: IPR017936 - InterPro: IPR012336 - InterPro: IPR012335 [H]
Pfam domain/function: PF00578 AhpC-TSA [H]
EC number: NA
Molecular weight: Translated: 19708; Mature: 19708
Theoretical pI: Translated: 6.13; Mature: 6.13
Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00194 THIOREDOXIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRRPPLAAALLALVAACAAPRTPQRPTPRPPPGPSRLLGTEVSFSAPDLAGRDVQVGGAA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCC ARGRVQVVDFWASWCEPCKEQLPHLDRLAREHGEDGLRVTGVAFDEDRAAVEAFLAPAPV CCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCE AFEILWDPGGAALGDRLDVQRLPTTLVIDRRGLVRHVHRGYDRAEGEKLEEEVRLLLAEP EEEEEECCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC AP CC >Mature Secondary Structure MRRPPLAAALLALVAACAAPRTPQRPTPRPPPGPSRLLGTEVSFSAPDLAGRDVQVGGAA CCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCEEECCCC ARGRVQVVDFWASWCEPCKEQLPHLDRLAREHGEDGLRVTGVAFDEDRAAVEAFLAPAPV CCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHHHCCCCE AFEILWDPGGAALGDRLDVQRLPTTLVIDRRGLVRHVHRGYDRAEGEKLEEEVRLLLAEP EEEEEECCCCCCCCCCCCHHHCCEEEEECCHHHHHHHHHCCCCCCHHHHHHHHHHHHCCC AP CC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]