| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yceL [C]
Identifier: 220918617
GI number: 220918617
Start: 3938738
End: 3939952
Strand: Direct
Name: yceL [C]
Synonym: A2cp1_3525
Alternate gene names: 220918617
Gene position: 3938738-3939952 (Clockwise)
Preceding gene: 220918615
Following gene: 220918619
Centisome position: 78.32
GC content: 76.63
Gene sequence:
>1215_bases GTGCAGGCGCAGCAGGACGAGCGGCGGGGCGCGCCGGCGCGGATCCCCGCCGGCGTGTGGGTGCTGGGCGGCGTGAGCCT GCTCATGGACGTCTCCTCCGAGATGATCCACGCGCTGCTGCCGCTGTTCATGGTGACCGCGCTCGGCGCGGGCGCGCTGA CGGTGGGCGTGATCGAGGGGCTGGCCGAGTCCACCGCGCTGGGGGTGAAGGTGTTCTCGGGCGTGCTGAGCGACGCGCTC GGCCGGCGCAAGGCGCTCGCGGTCGCCGGGTACGCGCTGGGCGCCGCCACGAAGCCGCTCTTCGCCCTGGCGCCGACGCC GGCGGTGGTGCTCGGGGCGCGCCTGCTGGATCGGGTCGGCAAGGGCATCCGCGGCGCGCCGCGCGACGCGCTGGTGGCCG ACATCACGCCGCCGGCGCTCCGGGGCGCGGCGTTCGGCCTGCGCCAGGCGCTCGACACGGTGGGCGCGTTCGCGGGCCCG CTCCTCGCCACGGGCCTGATGCTGCTGTGGGCGAACGACTTCCGCCGCGTGTTCTGGGTGGCGGTGATCCCGGGCGCGCT GTCGGTGGCGCTGCTCTGGCTCGGGCTGCGCGAGCCCGAGCACCGCGGGGACGGCCGACGCACGAACCCGATCCGGCGCG AGAGCCTGCGGCGCCTCGGCCCCCGGTACTGGTGGGTGGTGGGCATCGGCGCGACGTTCACGCTCGCCCGCTTCAGCGAG GCGTTCCTCGTGCTGCGCGCGCAGCAGGGCGGCGTCCCGCTCGCGCTCGTGCCGCTGGTGATGGTCGCGATGAACCTGGT GTACGCGCTGACCGCCTATCCCTCGGGGCGCCTGTCGGATCGCGTGAGCCGCAGGGGCCTCCTGGCGGCGGGGCTCGGCG TCCTGGTCGCCGCGGATCTCGTGCTGGCGATGGAGGGCGGCTGGCCGGTGGTGCTCGCCGGCGTGGCGCTGTGGGGCGTG CACATGGGCATCACGCAGGGCCTGTTCGCGACGCTGGTGGCGGACACCGCCCCGCCCGACCTGCGCGGCACCGCGTTCGG CGTCTTCAACCTGCTCGCCGGGATCGCCACGCTGGTGGCGAGCGTGGTCGCGGGGCTCCTCTGGGAGCGGCTCGGCGCGC CCTTCACGTTCCGCGCGGGGGCCGTGTTCTGCCTGCTCGCGCTGGCGGGGCTCGCCGGGAGGCCGGCGGGGCTCCGGGCG GCGCCGCGCGGCTGA
Upstream 100 bases:
>100_bases CGCCGGGCCCCGCGGCGCCCTCGCGACGGCCCCACGCGAAGGGGAGGCGCTGTAGTGTGGGCGCGCGCCGGGCGAGCGGA CCGGCGCGGAGGGACGGACC
Downstream 100 bases:
>100_bases GATCCGCCGGCGGCTCAGCCGGCGAGCGCGGCGATGGCCCGCTCCAGGTCCTCGGGCAGCGGGGCGCGCACCTCCACCGG CGCGCCGTCGGACGGCCGCG
Product: major facilitator superfamily protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 404; Mature: 404
Protein sequence:
>404_residues MQAQQDERRGAPARIPAGVWVLGGVSLLMDVSSEMIHALLPLFMVTALGAGALTVGVIEGLAESTALGVKVFSGVLSDAL GRRKALAVAGYALGAATKPLFALAPTPAVVLGARLLDRVGKGIRGAPRDALVADITPPALRGAAFGLRQALDTVGAFAGP LLATGLMLLWANDFRRVFWVAVIPGALSVALLWLGLREPEHRGDGRRTNPIRRESLRRLGPRYWWVVGIGATFTLARFSE AFLVLRAQQGGVPLALVPLVMVAMNLVYALTAYPSGRLSDRVSRRGLLAAGLGVLVAADLVLAMEGGWPVVLAGVALWGV HMGITQGLFATLVADTAPPDLRGTAFGVFNLLAGIATLVASVVAGLLWERLGAPFTFRAGAVFCLLALAGLAGRPAGLRA APRG
Sequences:
>Translated_404_residues MQAQQDERRGAPARIPAGVWVLGGVSLLMDVSSEMIHALLPLFMVTALGAGALTVGVIEGLAESTALGVKVFSGVLSDAL GRRKALAVAGYALGAATKPLFALAPTPAVVLGARLLDRVGKGIRGAPRDALVADITPPALRGAAFGLRQALDTVGAFAGP LLATGLMLLWANDFRRVFWVAVIPGALSVALLWLGLREPEHRGDGRRTNPIRRESLRRLGPRYWWVVGIGATFTLARFSE AFLVLRAQQGGVPLALVPLVMVAMNLVYALTAYPSGRLSDRVSRRGLLAAGLGVLVAADLVLAMEGGWPVVLAGVALWGV HMGITQGLFATLVADTAPPDLRGTAFGVFNLLAGIATLVASVVAGLLWERLGAPFTFRAGAVFCLLALAGLAGRPAGLRA APRG >Mature_404_residues MQAQQDERRGAPARIPAGVWVLGGVSLLMDVSSEMIHALLPLFMVTALGAGALTVGVIEGLAESTALGVKVFSGVLSDAL GRRKALAVAGYALGAATKPLFALAPTPAVVLGARLLDRVGKGIRGAPRDALVADITPPALRGAAFGLRQALDTVGAFAGP LLATGLMLLWANDFRRVFWVAVIPGALSVALLWLGLREPEHRGDGRRTNPIRRESLRRLGPRYWWVVGIGATFTLARFSE AFLVLRAQQGGVPLALVPLVMVAMNLVYALTAYPSGRLSDRVSRRGLLAAGLGVLVAADLVLAMEGGWPVVLAGVALWGV HMGITQGLFATLVADTAPPDLRGTAFGVFNLLAGIATLVASVVAGLLWERLGAPFTFRAGAVFCLLALAGLAGRPAGLRA APRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the major facilitator superfamily [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR020846 - InterPro: IPR011701 - InterPro: IPR016196 [H]
Pfam domain/function: PF07690 MFS_1 [H]
EC number: NA
Molecular weight: Translated: 41982; Mature: 41982
Theoretical pI: Translated: 11.78; Mature: 11.78
Prosite motif: PS50850 MFS ; PS00216 SUGAR_TRANSPORT_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQAQQDERRGAPARIPAGVWVLGGVSLLMDVSSEMIHALLPLFMVTALGAGALTVGVIEG CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAESTALGVKVFSGVLSDALGRRKALAVAGYALGAATKPLFALAPTPAVVLGARLLDRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHC KGIRGAPRDALVADITPPALRGAAFGLRQALDTVGAFAGPLLATGLMLLWANDFRRVFWV CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIPGALSVALLWLGLREPEHRGDGRRTNPIRRESLRRLGPRYWWVVGIGATFTLARFSE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH AFLVLRAQQGGVPLALVPLVMVAMNLVYALTAYPSGRLSDRVSRRGLLAAGLGVLVAADL HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHH VLAMEGGWPVVLAGVALWGVHMGITQGLFATLVADTAPPDLRGTAFGVFNLLAGIATLVA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SVVAGLLWERLGAPFTFRAGAVFCLLALAGLAGRPAGLRAAPRG HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MQAQQDERRGAPARIPAGVWVLGGVSLLMDVSSEMIHALLPLFMVTALGAGALTVGVIEG CCCCCCHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH LAESTALGVKVFSGVLSDALGRRKALAVAGYALGAATKPLFALAPTPAVVLGARLLDRVG HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEECCCHHHHHHHHHHHHHC KGIRGAPRDALVADITPPALRGAAFGLRQALDTVGAFAGPLLATGLMLLWANDFRRVFWV CCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AVIPGALSVALLWLGLREPEHRGDGRRTNPIRRESLRRLGPRYWWVVGIGATFTLARFSE HHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHH AFLVLRAQQGGVPLALVPLVMVAMNLVYALTAYPSGRLSDRVSRRGLLAAGLGVLVAADL HHHEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCHHHHHHHHHHHHHH VLAMEGGWPVVLAGVALWGVHMGITQGLFATLVADTAPPDLRGTAFGVFNLLAGIATLVA HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHH SVVAGLLWERLGAPFTFRAGAVFCLLALAGLAGRPAGLRAAPRG HHHHHHHHHHHCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]