Definition Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome.
Accession NC_011891
Length 5,029,329

Click here to switch to the map view.

The map label for this gene is ypiP [H]

Identifier: 220918585

GI number: 220918585

Start: 3905206

End: 3906000

Strand: Direct

Name: ypiP [H]

Synonym: A2cp1_3493

Alternate gene names: 220918585

Gene position: 3905206-3906000 (Clockwise)

Preceding gene: 220918582

Following gene: 220918586

Centisome position: 77.65

GC content: 79.12

Gene sequence:

>795_bases
GTGCGCCTCGTCGTCACCACCCCGCTCCGCCCGTCCGCCGAGGAGGAGCGCGACGCCGTGCTCGCCGCGGCGCGCTACGA
CCTGCCCTACGCCGCGCGCGGCGGGCGGGCGCTCACCCGCGTGGTCGCGGCCGCGGGCGGCGAGGCCGCGCTCGTCCTCT
CCGCCACGCGCGCGGTGCTGGTGGCGGGCGGGGCCGAGCACGCCTGGTCGCCGGGGATGGGCATCCTCAGGATGAAGCGG
GTGCTGGCGGCGCGCGCGTCCGGCCGGCCCGCGGCGCCGCCGGATCGCGACCCGTTCACCGAGGCGGCGGGGCTCGAGCC
GGGCGACCGCGTGCTCGATTGCACGGCCGGCCTCGGCGCGGATGCGCTGGTGGCGGCTGGGGCGGTCGGGCCCCGCGGCG
AGGTGGTGGGGATCGAGTCCTCGCGCGCGCTGGCAGCGTGGACCGGCGAGGGGATGCGAAGGCTGGAGCACGAGCCGGCG
AGGCGGGTGGAGATCCGCTGCGCCGACCACGCGGCGTTCCTGGCCGGGGCGGCGGATCGGTCCTTCGACGTGGTGGTGTT
CGATCCGATGTTCCGGCACGCGCGGGCGGAGCCGGGCGGGTTCGACGTGGTCCGGCGGCTCGCCGACGCGCGGCCGCTCG
CGGCGGAGGCGCTGGCCGAGGCGCGGCGGGTGGCGCGGCGCTGGGTGGTGGTGAAGGACGGCGCGCCGGGGTGGGATCTG
GCGCGGCTGGGGCTGGTGCCGATGGCGAGCGCGCGGGGGGCGCATCGGTACTATGCGAGGGTCGAGGCGAGGTGA

Upstream 100 bases:

>100_bases
CATCCTACGACGCCCGCGCGCCCCGGCGCAACCCGTGCCGGCCGTTCCCTTCGAGCGCCAGGCCTTGCGCGGAGGACCGG
GAGCGGGCATCCCTGCCTGC

Downstream 100 bases:

>100_bases
ATCGGAGCGGGAGCCGCGCGCGAACGTTCCGAATGGCGGTGAGGGGGCGGGGGCGGCGGGAGCGGGGCTGCTTGGCCGGG
CCGAACGGGGGCACGAGGGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 264; Mature: 264

Protein sequence:

>264_residues
MRLVVTTPLRPSAEEERDAVLAAARYDLPYAARGGRALTRVVAAAGGEAALVLSATRAVLVAGGAEHAWSPGMGILRMKR
VLAARASGRPAAPPDRDPFTEAAGLEPGDRVLDCTAGLGADALVAAGAVGPRGEVVGIESSRALAAWTGEGMRRLEHEPA
RRVEIRCADHAAFLAGAADRSFDVVVFDPMFRHARAEPGGFDVVRRLADARPLAAEALAEARRVARRWVVVKDGAPGWDL
ARLGLVPMASARGAHRYYARVEAR

Sequences:

>Translated_264_residues
MRLVVTTPLRPSAEEERDAVLAAARYDLPYAARGGRALTRVVAAAGGEAALVLSATRAVLVAGGAEHAWSPGMGILRMKR
VLAARASGRPAAPPDRDPFTEAAGLEPGDRVLDCTAGLGADALVAAGAVGPRGEVVGIESSRALAAWTGEGMRRLEHEPA
RRVEIRCADHAAFLAGAADRSFDVVVFDPMFRHARAEPGGFDVVRRLADARPLAAEALAEARRVARRWVVVKDGAPGWDL
ARLGLVPMASARGAHRYYARVEAR
>Mature_264_residues
MRLVVTTPLRPSAEEERDAVLAAARYDLPYAARGGRALTRVVAAAGGEAALVLSATRAVLVAGGAEHAWSPGMGILRMKR
VLAARASGRPAAPPDRDPFTEAAGLEPGDRVLDCTAGLGADALVAAGAVGPRGEVVGIESSRALAAWTGEGMRRLEHEPA
RRVEIRCADHAAFLAGAADRSFDVVVFDPMFRHARAEPGGFDVVRRLADARPLAAEALAEARRVARRWVVVKDGAPGWDL
ARLGLVPMASARGAHRYYARVEAR

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004154
- InterPro:   IPR007536 [H]

Pfam domain/function: PF04445 DUF548 [H]

EC number: NA

Molecular weight: Translated: 27862; Mature: 27862

Theoretical pI: Translated: 10.27; Mature: 10.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLVVTTPLRPSAEEERDAVLAAARYDLPYAARGGRALTRVVAAAGGEAALVLSATRAVL
CEEEEECCCCCCCCHHHHHEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEEEE
VAGGAEHAWSPGMGILRMKRVLAARASGRPAAPPDRDPFTEAAGLEPGDRVLDCTAGLGA
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCCC
DALVAAGAVGPRGEVVGIESSRALAAWTGEGMRRLEHEPARRVEIRCADHAAFLAGAADR
HHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCCCC
SFDVVVFDPMFRHARAEPGGFDVVRRLADARPLAAEALAEARRVARRWVVVKDGAPGWDL
CEEEEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCH
ARLGLVPMASARGAHRYYARVEAR
HHHCCCCCCCCCCCCEEEEEEECC
>Mature Secondary Structure
MRLVVTTPLRPSAEEERDAVLAAARYDLPYAARGGRALTRVVAAAGGEAALVLSATRAVL
CEEEEECCCCCCCCHHHHHEEHHHHCCCCCCCCCCHHHHHHHHHCCCCEEEEEEECEEEE
VAGGAEHAWSPGMGILRMKRVLAARASGRPAAPPDRDPFTEAAGLEPGDRVLDCTAGLGA
EECCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHCCCCCCCCEEEECCCCCC
DALVAAGAVGPRGEVVGIESSRALAAWTGEGMRRLEHEPARRVEIRCADHAAFLAGAADR
HHHHHCCCCCCCCCEEEECCCCEEEEECCHHHHHHHCCCCCEEEEEECCCHHHHHCCCCC
SFDVVVFDPMFRHARAEPGGFDVVRRLADARPLAAEALAEARRVARRWVVVKDGAPGWDL
CEEEEEECHHHHHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEECCCCCCCH
ARLGLVPMASARGAHRYYARVEAR
HHHCCCCCCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]