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The map label for this gene is atoS [C]

Identifier: 220918579

GI number: 220918579

Start: 3896469

End: 3898214

Strand: Direct

Name: atoS [C]

Synonym: A2cp1_3487

Alternate gene names: 220918579

Gene position: 3896469-3898214 (Clockwise)

Preceding gene: 220918578

Following gene: 220918581

Centisome position: 77.47

GC content: 80.07

Gene sequence:

>1746_bases
ATGACGCTCCGCGGGAAGCTCGCGCTCGCGTTCTCGCTGTTCGCGGCGGTGCCGCTCGCCGCCACGCTCGTGCCCGTGTC
GCGGGCGCTCGGGCGCGCGCTCACCACCGAGCACGCCGCCCGCCTGGACGGCGCCGCGGCCGCCGTGCAGAAGGAGCTGG
CGCGCCTCGGCGAGCACGCGGCCGGGGCGGTGGCCGACCTGGCGCGGGCGCCGGAGCTGGAGGCGTTCGCGCGGGACCGG
TCGGCGGACGGCGCCGAGCTCGCGGAGGCGGCGGCGCGCGCCGGCGAGTGGATGGGGCCGCGCGGCCTGGACGTGCTCGC
GGTGCTGGAGCCGGACGGGCGGGTGGTCTCGTCGGGTCACCTGCCCGGCCGCGCCGGCGATCCCGACCCGGAGCTGGGCG
ACCTCCCCGACGCGGTGCGCCCCGGGCGCGCGGTGCCCCGGGTCGTCTCGCGGGCCGGGCCGGAGGGCGTGGAGCCGGTG
CTGGCGCTGGTGGCCTGGGCGCCGGGGCCGGGCGATCCGCCGCTGCGGGTCGCCGGCGGCGTGGCGCTCACCGAGGCCCG
CGCGGCCCGCCTGGCCGCGCTGACCGGCGGCGCGGTGGTGATCCGCTCGGCGGACGGCGAGGTGGTGGCGGCCGCGTCGG
CGGAGGCGCCCGGGCCGGCGCGCGGCTGGCGGCGGCTGCGCCTGCTGTTCGGCGGGCTCTCCGCCGCGCCCCGCCGCACG
ATCCCGCTCGGCCCGTCCGAAGCCCCGGTCGCGCGGGTCGAGGTGTCGCTCGCGTCCGAGGGGCTGGCCCGCGCCGAGAC
CACGGTCCTGCTCGCGTTCCTGGGCGCGCTCGCGGCGGGCGTGGCGGCCGCGGCCGCGCTGGGCGCGGTGGTGGCGGCGC
GCATCACCCGGCCGCTGGAGGGGCTGCGGGCCGCGGCCGCGCGGGTCGCCGGCGGGGACCTGGCCGCGCGGGTCGAGGTC
CGCGCCGGTGGCGAGGTGGGCGAGCTGGTCCGGGCGTTCAACGCCATGACGCAGGACCTGGCGCAGGGGCGCGCCCGGCT
GGCGCAGGCGGAGCGCATCGCCGCCTGGCGCGAGGTGGCCCGCCGGCTGGCGCACGAGATCAAGAACCCGCTCACGCCCA
TCGCGATGAGCGTGGAGACGCTCCGCGAGGCGCACGCGCAGGGGCGCGCCGACTTCCCCGAGATCTTCGACGAGGGCACG
CAGGCGATCGGCGAGGAGGTCCGGCGCCTGAAGCGGATCGTGGACGAGTTCAGCCGCTTCGCCCGCCTGCCCGCGCCGGA
GCGCAGCGAGGTGCCGGCGGAGGAGCTGGCGTCCGCGGTGCTGGCGCTGTTCCCGGCGGCGCCGGCGGGCGTCGAGGTCG
AGCGGGCCATCGCGCCCGACCTCCCGGCGGTGCTGGCCGACCGCGACCAGGTCATGCAGGTGCTGCTCAACCTGGTCCGG
AACGCGCTCGACGCCATGCCGTCCGGAGGCCGGCTGCGCCTGGTGGCGCGCAGCGACGGGGATGCGGTGGCGTTCGAGGT
GTCCGACTCCGGCGCGGGGATCGCGCCGGCCGACCTGGAGCGGGTGTTCGAGCCCTACTTCACCACCAAGCCCGGCGGCA
CGGGGCTCGGGCTCGCCATCGCGCGCCGCATCGCCGAGGAGCACGGCGGCTCGCTCGAGGCGGCGTCCCCGCCCGGCGCA
GGCGCGACGTTCACGCTGAGGCTGCCGGTCGCCGCGGCGGCGGTGCGGCAAGCGCCGGGCGCGTGA

Upstream 100 bases:

>100_bases
GCCAGCGCGCCTCGCCGGCGCCGGCGCTCCAGGGCGCGGCGCCGCGCGCCGACGGCGGGATCGATCCGGGCGATCTGTGG
CTGCTGGGGGGAGGCGCGCC

Downstream 100 bases:

>100_bases
CCGCGCGGCGAAGCCGCTCCCGCGGGCAAGGCCCCTACCGCACCGGCGTCGCCTTGAGAGCGGTCTTCCCTTCCTTCACG
TAGACCTGGAAGCGGACCGT

Product: histidine kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 581; Mature: 580

Protein sequence:

>581_residues
MTLRGKLALAFSLFAAVPLAATLVPVSRALGRALTTEHAARLDGAAAAVQKELARLGEHAAGAVADLARAPELEAFARDR
SADGAELAEAAARAGEWMGPRGLDVLAVLEPDGRVVSSGHLPGRAGDPDPELGDLPDAVRPGRAVPRVVSRAGPEGVEPV
LALVAWAPGPGDPPLRVAGGVALTEARAARLAALTGGAVVIRSADGEVVAAASAEAPGPARGWRRLRLLFGGLSAAPRRT
IPLGPSEAPVARVEVSLASEGLARAETTVLLAFLGALAAGVAAAAALGAVVAARITRPLEGLRAAAARVAGGDLAARVEV
RAGGEVGELVRAFNAMTQDLAQGRARLAQAERIAAWREVARRLAHEIKNPLTPIAMSVETLREAHAQGRADFPEIFDEGT
QAIGEEVRRLKRIVDEFSRFARLPAPERSEVPAEELASAVLALFPAAPAGVEVERAIAPDLPAVLADRDQVMQVLLNLVR
NALDAMPSGGRLRLVARSDGDAVAFEVSDSGAGIAPADLERVFEPYFTTKPGGTGLGLAIARRIAEEHGGSLEAASPPGA
GATFTLRLPVAAAAVRQAPGA

Sequences:

>Translated_581_residues
MTLRGKLALAFSLFAAVPLAATLVPVSRALGRALTTEHAARLDGAAAAVQKELARLGEHAAGAVADLARAPELEAFARDR
SADGAELAEAAARAGEWMGPRGLDVLAVLEPDGRVVSSGHLPGRAGDPDPELGDLPDAVRPGRAVPRVVSRAGPEGVEPV
LALVAWAPGPGDPPLRVAGGVALTEARAARLAALTGGAVVIRSADGEVVAAASAEAPGPARGWRRLRLLFGGLSAAPRRT
IPLGPSEAPVARVEVSLASEGLARAETTVLLAFLGALAAGVAAAAALGAVVAARITRPLEGLRAAAARVAGGDLAARVEV
RAGGEVGELVRAFNAMTQDLAQGRARLAQAERIAAWREVARRLAHEIKNPLTPIAMSVETLREAHAQGRADFPEIFDEGT
QAIGEEVRRLKRIVDEFSRFARLPAPERSEVPAEELASAVLALFPAAPAGVEVERAIAPDLPAVLADRDQVMQVLLNLVR
NALDAMPSGGRLRLVARSDGDAVAFEVSDSGAGIAPADLERVFEPYFTTKPGGTGLGLAIARRIAEEHGGSLEAASPPGA
GATFTLRLPVAAAAVRQAPGA
>Mature_580_residues
TLRGKLALAFSLFAAVPLAATLVPVSRALGRALTTEHAARLDGAAAAVQKELARLGEHAAGAVADLARAPELEAFARDRS
ADGAELAEAAARAGEWMGPRGLDVLAVLEPDGRVVSSGHLPGRAGDPDPELGDLPDAVRPGRAVPRVVSRAGPEGVEPVL
ALVAWAPGPGDPPLRVAGGVALTEARAARLAALTGGAVVIRSADGEVVAAASAEAPGPARGWRRLRLLFGGLSAAPRRTI
PLGPSEAPVARVEVSLASEGLARAETTVLLAFLGALAAGVAAAAALGAVVAARITRPLEGLRAAAARVAGGDLAARVEVR
AGGEVGELVRAFNAMTQDLAQGRARLAQAERIAAWREVARRLAHEIKNPLTPIAMSVETLREAHAQGRADFPEIFDEGTQ
AIGEEVRRLKRIVDEFSRFARLPAPERSEVPAEELASAVLALFPAAPAGVEVERAIAPDLPAVLADRDQVMQVLLNLVRN
ALDAMPSGGRLRLVARSDGDAVAFEVSDSGAGIAPADLERVFEPYFTTKPGGTGLGLAIARRIAEEHGGSLEAASPPGAG
ATFTLRLPVAAAAVRQAPGA

Specific function: Member of the two-component regulatory system RT0603/RT0550 [H]

COG id: COG5000

COG function: function code T; Signal transduction histidine kinase involved in nitrogen fixation and metabolism regulation

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1788549, Length=259, Percent_Identity=34.3629343629344, Blast_Score=139, Evalue=5e-34,
Organism=Escherichia coli, GI1790436, Length=227, Percent_Identity=38.3259911894273, Blast_Score=133, Evalue=4e-32,
Organism=Escherichia coli, GI1790300, Length=243, Percent_Identity=35.8024691358025, Blast_Score=111, Evalue=1e-25,
Organism=Escherichia coli, GI87081816, Length=353, Percent_Identity=30.5949008498584, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1788393, Length=291, Percent_Identity=27.4914089347079, Blast_Score=98, Evalue=1e-21,
Organism=Escherichia coli, GI145693157, Length=232, Percent_Identity=28.0172413793103, Blast_Score=92, Evalue=9e-20,
Organism=Escherichia coli, GI48994928, Length=122, Percent_Identity=36.8852459016393, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789808, Length=294, Percent_Identity=27.891156462585, Blast_Score=84, Evalue=3e-17,
Organism=Escherichia coli, GI1790346, Length=288, Percent_Identity=27.0833333333333, Blast_Score=83, Evalue=6e-17,
Organism=Escherichia coli, GI1787894, Length=316, Percent_Identity=26.2658227848101, Blast_Score=82, Evalue=1e-16,
Organism=Escherichia coli, GI1789149, Length=368, Percent_Identity=23.0978260869565, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1786600, Length=234, Percent_Identity=23.0769230769231, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1790861, Length=217, Percent_Identity=30.8755760368664, Blast_Score=68, Evalue=1e-12,
Organism=Escherichia coli, GI1786783, Length=351, Percent_Identity=22.5071225071225, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786912, Length=242, Percent_Identity=25.6198347107438, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003660
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF00672 HAMP; PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 59542; Mature: 59410

Theoretical pI: Translated: 6.08; Mature: 6.08

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLRGKLALAFSLFAAVPLAATLVPVSRALGRALTTEHAARLDGAAAAVQKELARLGEHA
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVADLARAPELEAFARDRSADGAELAEAAARAGEWMGPRGLDVLAVLEPDGRVVSSGH
HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCC
LPGRAGDPDPELGDLPDAVRPGRAVPRVVSRAGPEGVEPVLALVAWAPGPGDPPLRVAGG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECC
VALTEARAARLAALTGGAVVIRSADGEVVAAASAEAPGPARGWRRLRLLFGGLSAAPRRT
CHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
IPLGPSEAPVARVEVSLASEGLARAETTVLLAFLGALAAGVAAAAALGAVVAARITRPLE
CCCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRAAAARVAGGDLAARVEVRAGGEVGELVRAFNAMTQDLAQGRARLAQAERIAAWREVA
HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAHEIKNPLTPIAMSVETLREAHAQGRADFPEIFDEGTQAIGEEVRRLKRIVDEFSRF
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLPAPERSEVPAEELASAVLALFPAAPAGVEVERAIAPDLPAVLADRDQVMQVLLNLVR
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCHHHHCCHHHHHHHHHHHHH
NALDAMPSGGRLRLVARSDGDAVAFEVSDSGAGIAPADLERVFEPYFTTKPGGTGLGLAI
HHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH
ARRIAEEHGGSLEAASPPGAGATFTLRLPVAAAAVRQAPGA
HHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCC
>Mature Secondary Structure 
TLRGKLALAFSLFAAVPLAATLVPVSRALGRALTTEHAARLDGAAAAVQKELARLGEHA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGAVADLARAPELEAFARDRSADGAELAEAAARAGEWMGPRGLDVLAVLEPDGRVVSSGH
HHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCEEECCC
LPGRAGDPDPELGDLPDAVRPGRAVPRVVSRAGPEGVEPVLALVAWAPGPGDPPLRVAGG
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHHHCCCCCCCCCCEEECC
VALTEARAARLAALTGGAVVIRSADGEVVAAASAEAPGPARGWRRLRLLFGGLSAAPRRT
CHHHHHHHHHHHHCCCCEEEEECCCCCEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCC
IPLGPSEAPVARVEVSLASEGLARAETTVLLAFLGALAAGVAAAAALGAVVAARITRPLE
CCCCCCCCCHHHEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLRAAAARVAGGDLAARVEVRAGGEVGELVRAFNAMTQDLAQGRARLAQAERIAAWREVA
HHHHHHHHHCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRLAHEIKNPLTPIAMSVETLREAHAQGRADFPEIFDEGTQAIGEEVRRLKRIVDEFSRF
HHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARLPAPERSEVPAEELASAVLALFPAAPAGVEVERAIAPDLPAVLADRDQVMQVLLNLVR
HCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEHHHHCCCCHHHHCCHHHHHHHHHHHHH
NALDAMPSGGRLRLVARSDGDAVAFEVSDSGAGIAPADLERVFEPYFTTKPGGTGLGLAI
HHHHCCCCCCEEEEEEECCCCEEEEEECCCCCCCCHHHHHHHHCCCCCCCCCCCCHHHHH
ARRIAEEHGGSLEAASPPGAGATFTLRLPVAAAAVRQAPGA
HHHHHHHCCCCCCCCCCCCCCCEEEEECHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA