| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918551
Identifier: 220918551
GI number: 220918551
Start: 3861637
End: 3862866
Strand: Reverse
Name: 220918551
Synonym: A2cp1_3459
Alternate gene names: NA
Gene position: 3862866-3861637 (Counterclockwise)
Preceding gene: 220918554
Following gene: 220918550
Centisome position: 76.81
GC content: 79.11
Gene sequence:
>1230_bases TTGCTGCTGCTGCTCTCCAGCCCGTGTGCCGCGCTCGCGGCGGAGGGGAGCGCCGCACCGGCGGCACGGGGTGAGCGCGA GGTGGCGGTCGCCACGCCGGCCGCCGTGCCGGACACCGACCGGCCCCTCGCTGGCCAGGCGGACGTGCCGGCGGCCCCGG CGACGGCCGGGGCGGCGAGCGCCCGCGAGGCCACCTACTCGCCGCCCGACGCGCCGGCCGGCACGGCGCGCGTCGAGGTG GTGCGCGCCGCCCCGCTGCCCGCGGCGCCCGCGCCCGCGCCGAGGGCCGCGCCGCCCGCGCCGGTCGCGCCGCCCCCGAG CCCGGTGGCGGAGCCGATCCGCGCCCGCCGCGAGGGGCTCCAGATCGAGGTGGGCGGGCAGGTGTTCGTCGGCGGCGCGG CGGACGCGCGCGACGGGTGGAAGCGCGACGTGGCGCTCGACCGGGCCCGCATCGAGGTGCGCGGGAGCATGCCGGGCCTG CTCACCGTCATCGAGGCGGACGTCGCCGACACGAAGCCGCTGAAGGACGCGTTCGTGCGCCTCGACGGCCCCTCCTCGAC GCGGCTCACCGCCGGCCGGTTCAAGCCGCCGTTCCTGGAGCGGGAGACGGCCTCCGCGTGGAAGCTCCCGCGCATCGGGC GCGGCGTGGTGAACGACTACCTGGTGGACCGGAACGAGATGGGCGGCCGGCGCGTCGGCGCGGTCGGCGCGTTGCGCCCG TGGGACGGCGCGGTGGAGCTGTCCGCGGGCGTGTTCCAGGGCACGCCCAACGGCGACGAGAAGCCGCCGCAGGACTACGT GGCGCGCGCCGCGGTCCGGCTCGCCGGGGCGCTCGAGCTCGGCGCCGCCGGCTACCGCGCCGGCCGCTCCACCCCGGACG TGCCCCGGCGCGAGGCGGCCTCCGCCTTCGCGGCGCTCGACGCGGGACCGCTGGCGGTGAGCCTGGAGGGGCTCACGGGG CACATCCAGCAGGGGACGTTCACCGCCGGTCTGGGCCTGGTCGAGTACACGATCCCCCTCGGCAAGCGGCTCCGCGTCAC GCCGATGGCGGGCCTGGAGGCGCTGCGACTCCGCGCGCCCGCGCAGGGGACCGGATCGTCCGCCGTGGCCGGGGCGGTGC TCGGCTTCGGGGAAGGGCTCAAGCTGAAGGTGCAGGGGGAGCGGGCGCGCCGCCCGGGGGAGACGGCGCCGGCCAACGCG ATCGCCGTCCAGCTCGCGACGAGGTTCTAG
Upstream 100 bases:
>100_bases CGCCCTGGGGGCGGGGGAGCGTGGGCGCGGATGTACGGGCATCGCCGTTGCACCGCGGCCGGCCGTGCTCGCATACCGAC CCACGCGCCGTGCGCTCCCG
Downstream 100 bases:
>100_bases CGTGGTGCCCTACGCGGAGGGACCGGTGACGCTCTTGCGGCGCGAGCACAAGGTGCTGCTCGCGCCGGGGGAGGCCCGGG ACATCGCGGCGCGGCTCGGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 409; Mature: 409
Protein sequence:
>409_residues MLLLLSSPCAALAAEGSAAPAARGEREVAVATPAAVPDTDRPLAGQADVPAAPATAGAASAREATYSPPDAPAGTARVEV VRAAPLPAAPAPAPRAAPPAPVAPPPSPVAEPIRARREGLQIEVGGQVFVGGAADARDGWKRDVALDRARIEVRGSMPGL LTVIEADVADTKPLKDAFVRLDGPSSTRLTAGRFKPPFLERETASAWKLPRIGRGVVNDYLVDRNEMGGRRVGAVGALRP WDGAVELSAGVFQGTPNGDEKPPQDYVARAAVRLAGALELGAAGYRAGRSTPDVPRREAASAFAALDAGPLAVSLEGLTG HIQQGTFTAGLGLVEYTIPLGKRLRVTPMAGLEALRLRAPAQGTGSSAVAGAVLGFGEGLKLKVQGERARRPGETAPANA IAVQLATRF
Sequences:
>Translated_409_residues MLLLLSSPCAALAAEGSAAPAARGEREVAVATPAAVPDTDRPLAGQADVPAAPATAGAASAREATYSPPDAPAGTARVEV VRAAPLPAAPAPAPRAAPPAPVAPPPSPVAEPIRARREGLQIEVGGQVFVGGAADARDGWKRDVALDRARIEVRGSMPGL LTVIEADVADTKPLKDAFVRLDGPSSTRLTAGRFKPPFLERETASAWKLPRIGRGVVNDYLVDRNEMGGRRVGAVGALRP WDGAVELSAGVFQGTPNGDEKPPQDYVARAAVRLAGALELGAAGYRAGRSTPDVPRREAASAFAALDAGPLAVSLEGLTG HIQQGTFTAGLGLVEYTIPLGKRLRVTPMAGLEALRLRAPAQGTGSSAVAGAVLGFGEGLKLKVQGERARRPGETAPANA IAVQLATRF >Mature_409_residues MLLLLSSPCAALAAEGSAAPAARGEREVAVATPAAVPDTDRPLAGQADVPAAPATAGAASAREATYSPPDAPAGTARVEV VRAAPLPAAPAPAPRAAPPAPVAPPPSPVAEPIRARREGLQIEVGGQVFVGGAADARDGWKRDVALDRARIEVRGSMPGL LTVIEADVADTKPLKDAFVRLDGPSSTRLTAGRFKPPFLERETASAWKLPRIGRGVVNDYLVDRNEMGGRRVGAVGALRP WDGAVELSAGVFQGTPNGDEKPPQDYVARAAVRLAGALELGAAGYRAGRSTPDVPRREAASAFAALDAGPLAVSLEGLTG HIQQGTFTAGLGLVEYTIPLGKRLRVTPMAGLEALRLRAPAQGTGSSAVAGAVLGFGEGLKLKVQGERARRPGETAPANA IAVQLATRF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41806; Mature: 41806
Theoretical pI: Translated: 10.08; Mature: 10.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLLLLSSPCAALAAEGSAAPAARGEREVAVATPAAVPDTDRPLAGQADVPAAPATAGAAS CEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC AREATYSPPDAPAGTARVEVVRAAPLPAAPAPAPRAAPPAPVAPPPSPVAEPIRARREGL CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC QIEVGGQVFVGGAADARDGWKRDVALDRARIEVRGSMPGLLTVIEADVADTKPLKDAFVR EEEECCEEEECCCCCCCCCCHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHEEE LDGPSSTRLTAGRFKPPFLERETASAWKLPRIGRGVVNDYLVDRNEMGGRRVGAVGALRP ECCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCC WDGAVELSAGVFQGTPNGDEKPPQDYVARAAVRLAGALELGAAGYRAGRSTPDVPRREAA CCCCEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHH SAFAALDAGPLAVSLEGLTGHIQQGTFTAGLGLVEYTIPLGKRLRVTPMAGLEALRLRAP HHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEEECCHHCCHHHEEECC AQGTGSSAVAGAVLGFGEGLKLKVQGERARRPGETAPANAIAVQLATRF CCCCCCHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCEEEEEEEECC >Mature Secondary Structure MLLLLSSPCAALAAEGSAAPAARGEREVAVATPAAVPDTDRPLAGQADVPAAPATAGAAS CEEEECCCHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCC AREATYSPPDAPAGTARVEVVRAAPLPAAPAPAPRAAPPAPVAPPPSPVAEPIRARREGL CCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCC QIEVGGQVFVGGAADARDGWKRDVALDRARIEVRGSMPGLLTVIEADVADTKPLKDAFVR EEEECCEEEECCCCCCCCCCHHHHHCCEEEEEEECCCCCEEEEEECCCCCCCCCCHHEEE LDGPSSTRLTAGRFKPPFLERETASAWKLPRIGRGVVNDYLVDRNEMGGRRVGAVGALRP ECCCCCCCEECCCCCCCCCCCCCHHHCCCCCCCCHHHHHHHHCCCCCCCCEECCCCCCCC WDGAVELSAGVFQGTPNGDEKPPQDYVARAAVRLAGALELGAAGYRAGRSTPDVPRREAA CCCCEEEECEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCHHHHH SAFAALDAGPLAVSLEGLTGHIQQGTFTAGLGLVEYTIPLGKRLRVTPMAGLEALRLRAP HHHHHCCCCCEEEEECCCCCCCCCCEEECCCCEEEEECCCCCEEEECCHHCCHHHEEECC AQGTGSSAVAGAVLGFGEGLKLKVQGERARRPGETAPANAIAVQLATRF CCCCCCHHHHHHHHCCCCCCEEEECCHHCCCCCCCCCCCEEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA