| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is yyaP [H]
Identifier: 220918488
GI number: 220918488
Start: 3783913
End: 3784461
Strand: Direct
Name: yyaP [H]
Synonym: A2cp1_3394
Alternate gene names: 220918488
Gene position: 3783913-3784461 (Clockwise)
Preceding gene: 220918487
Following gene: 220918492
Centisome position: 75.24
GC content: 70.31
Gene sequence:
>549_bases ATGGGACTCCTGACCTTCGCGCTCAACGTGACGCTCGACGGTTGCTGCGACCACCGCGAGGGGATCGCCGACGACGAGAT GCTCCGCTACTGGACGCGCGTGATGGACGGGGCGGGAGCGATGCTCTTCGGCCGGGTGACCTACGAGCTGATGGAGGAGG CCTGGCCGCAGGTGGCGCGCGACCCGAAGGCGAGGCCGGCGGACCGGACCTGGGCGAGGAAGCTCGAGGCGAAGCCCAAG TACGTGGTCTCGACCACGCGCCGCGACTTCCCGTGGAGCAACACGCACCTCGTCGAGGGAGACCTGACGCGGGCGGTGAA GGCGCTGAAGAAGGCCACGCCGCGCGGGATCCTGGTGGGCAGCCCCCAGCTCTCGGCCGCGCTGCAGCGCCTCGATCTCG TGGACGAGTATCGCCTCGTCGTCCACCCGGTGGTGGCCGGGCACGGTCCGTACCTGTTCACCGGCCTGCAGCCCTCGCTG CGCCTGAAGCTCGTGGCGGCGAGGCGGCTGAAGTCGGGCATCGTGACGCTGCACTACCGGCGACGCTAG
Upstream 100 bases:
>100_bases CGAGGCCATGATGCCGATGACGAAGATCGACGTCGCGAAGATCGAGGCGGCGCGGCGCGGCTGACGCCCGCATGACTCGA CGCATCCGGCCATCGACTCC
Downstream 100 bases:
>100_bases AGGGCGTTCGGCGGACGCCGGTTGCGAGCAAGCGGGCGGCGATCCTTCCCGGCCGGCGCCCCTTGCACGCACCGGTGACG TTGCGCCGCGGTGGCAGGAG
Product: bifunctional deaminase-reductase domain-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 182; Mature: 181
Protein sequence:
>182_residues MGLLTFALNVTLDGCCDHREGIADDEMLRYWTRVMDGAGAMLFGRVTYELMEEAWPQVARDPKARPADRTWARKLEAKPK YVVSTTRRDFPWSNTHLVEGDLTRAVKALKKATPRGILVGSPQLSAALQRLDLVDEYRLVVHPVVAGHGPYLFTGLQPSL RLKLVAARRLKSGIVTLHYRRR
Sequences:
>Translated_182_residues MGLLTFALNVTLDGCCDHREGIADDEMLRYWTRVMDGAGAMLFGRVTYELMEEAWPQVARDPKARPADRTWARKLEAKPK YVVSTTRRDFPWSNTHLVEGDLTRAVKALKKATPRGILVGSPQLSAALQRLDLVDEYRLVVHPVVAGHGPYLFTGLQPSL RLKLVAARRLKSGIVTLHYRRR >Mature_181_residues GLLTFALNVTLDGCCDHREGIADDEMLRYWTRVMDGAGAMLFGRVTYELMEEAWPQVARDPKARPADRTWARKLEAKPKY VVSTTRRDFPWSNTHLVEGDLTRAVKALKKATPRGILVGSPQLSAALQRLDLVDEYRLVVHPVVAGHGPYLFTGLQPSLR LKLVAARRLKSGIVTLHYRRR
Specific function: Unknown
COG id: COG0262
COG function: function code H; Dihydrofolate reductase
Gene ontology:
Cell location: Membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: To B.subtilis ywjB [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR002734 [H]
Pfam domain/function: PF01872 RibD_C [H]
EC number: NA
Molecular weight: Translated: 20565; Mature: 20434
Theoretical pI: Translated: 10.44; Mature: 10.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGLLTFALNVTLDGCCDHREGIADDEMLRYWTRVMDGAGAMLFGRVTYELMEEAWPQVAR CCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DPKARPADRTWARKLEAKPKYVVSTTRRDFPWSNTHLVEGDLTRAVKALKKATPRGILVG CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEC SPQLSAALQRLDLVDEYRLVVHPVVAGHGPYLFTGLQPSLRLKLVAARRLKSGIVTLHYR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEE RR CC >Mature Secondary Structure GLLTFALNVTLDGCCDHREGIADDEMLRYWTRVMDGAGAMLFGRVTYELMEEAWPQVAR CEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHC DPKARPADRTWARKLEAKPKYVVSTTRRDFPWSNTHLVEGDLTRAVKALKKATPRGILVG CCCCCCCCHHHHHHHCCCCCEEEECCCCCCCCCCCEEECHHHHHHHHHHHHCCCCCEEEC SPQLSAALQRLDLVDEYRLVVHPVVAGHGPYLFTGLQPSLRLKLVAARRLKSGIVTLHYR CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHHHHHHHCCEEEEEEE RR CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7584024; 9384377 [H]