| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918466
Identifier: 220918466
GI number: 220918466
Start: 3750222
End: 3751004
Strand: Direct
Name: 220918466
Synonym: A2cp1_3370
Alternate gene names: NA
Gene position: 3750222-3751004 (Clockwise)
Preceding gene: 220918465
Following gene: 220918467
Centisome position: 74.57
GC content: 73.69
Gene sequence:
>783_bases ATGGCGCAGAAGCACTCGAAGAAGCCCACCGACATGGGGACGAACCGGACCGGCATCGCGGCCTCCCCGGTGGACGCGAA GAAGGCGGTGGAGGGGGCGCAGCGCGCCGCTGCGACGGAGGGGGGCGCGGAGCGCCTCGCCGACTTCCGCGCGGAGTGGT CGAAGGCGGCGCCGCCCGCCGGCACCATGCCGCCTCCCGCGACGGTGAAGGGCGCCGTGAAGAGCCTCTCCAAGGCCGTC CGGGGGGAGACCGCGAACGTGCTGCTCGACAAGCTCGGCGAGCGGCTGGCGTTCGAGCGCACCGGAGTCCGGCTCTACGA GGCCGTGCTCGCGAAGCTGCCCGCGAGCAGGACGAGCGACGGCGACCTCGGCGCCCCCGAGCTGCGGCAGCTTCGCGACG AGGAGCACCGCCACATGCTCGTCGTCACGGAGGCCATCGAGCAGCTCGGGGGCGATCCCACCGCGGTGACGCCCTGCGCG AACCTCGCCGGCGTGCAGGGCCTCGGGCTCGTCCAGTCCCTCGCCGACCCGCGCACGACGCTCACGCAGTGCCTCGACAC GCTGCTCGCGGCGGAGCTCATCGACAACGACGGGTGGAAGCTGCTCATCGCGCTCGCCGAGGGGATGGGCCAGACCGAGG TGGCGAAGCGCTTCACGGAGTGCCTGGCCGAGGAGGACGAGCACCTCCTCAAGGTGCGGGCCTGGGTCGCCGAGCGGCTC GAGATCCAGGCCGGGACGGGGCTCCCGCGGGCCGACTTCGGGGAGCCGGCGCAGCCGGTCTGA
Upstream 100 bases:
>100_bases GCCGACGGCTCGCCCACGGAGATCGTCGCCGGCGGCTATCGCTGGCGGCCCGGGACCGAGCTCGCCGGGACCACGTCGGT CCACTAGGGAGGGGAACGCC
Downstream 100 bases:
>100_bases CCTTCATCCTTCTTCACGTTCGCGACGCGCACCGGACAAGCGCGCACGCGAGGATGCTCCCGTGACCTTCACGGAGGCAT CCCCATGAGCTCGTTCCTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 260; Mature: 259
Protein sequence:
>260_residues MAQKHSKKPTDMGTNRTGIAASPVDAKKAVEGAQRAAATEGGAERLADFRAEWSKAAPPAGTMPPPATVKGAVKSLSKAV RGETANVLLDKLGERLAFERTGVRLYEAVLAKLPASRTSDGDLGAPELRQLRDEEHRHMLVVTEAIEQLGGDPTAVTPCA NLAGVQGLGLVQSLADPRTTLTQCLDTLLAAELIDNDGWKLLIALAEGMGQTEVAKRFTECLAEEDEHLLKVRAWVAERL EIQAGTGLPRADFGEPAQPV
Sequences:
>Translated_260_residues MAQKHSKKPTDMGTNRTGIAASPVDAKKAVEGAQRAAATEGGAERLADFRAEWSKAAPPAGTMPPPATVKGAVKSLSKAV RGETANVLLDKLGERLAFERTGVRLYEAVLAKLPASRTSDGDLGAPELRQLRDEEHRHMLVVTEAIEQLGGDPTAVTPCA NLAGVQGLGLVQSLADPRTTLTQCLDTLLAAELIDNDGWKLLIALAEGMGQTEVAKRFTECLAEEDEHLLKVRAWVAERL EIQAGTGLPRADFGEPAQPV >Mature_259_residues AQKHSKKPTDMGTNRTGIAASPVDAKKAVEGAQRAAATEGGAERLADFRAEWSKAAPPAGTMPPPATVKGAVKSLSKAVR GETANVLLDKLGERLAFERTGVRLYEAVLAKLPASRTSDGDLGAPELRQLRDEEHRHMLVVTEAIEQLGGDPTAVTPCAN LAGVQGLGLVQSLADPRTTLTQCLDTLLAAELIDNDGWKLLIALAEGMGQTEVAKRFTECLAEEDEHLLKVRAWVAERLE IQAGTGLPRADFGEPAQPV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27600; Mature: 27469
Theoretical pI: Translated: 5.23; Mature: 5.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAQKHSKKPTDMGTNRTGIAASPVDAKKAVEGAQRAAATEGGAERLADFRAEWSKAAPPA CCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC GTMPPPATVKGAVKSLSKAVRGETANVLLDKLGERLAFERTGVRLYEAVLAKLPASRTSD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDLGAPELRQLRDEEHRHMLVVTEAIEQLGGDPTAVTPCANLAGVQGLGLVQSLADPRTT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHH LTQCLDTLLAAELIDNDGWKLLIALAEGMGQTEVAKRFTECLAEEDEHLLKVRAWVAERL HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAGTGLPRADFGEPAQPV HHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure AQKHSKKPTDMGTNRTGIAASPVDAKKAVEGAQRAAATEGGAERLADFRAEWSKAAPPA CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCC GTMPPPATVKGAVKSLSKAVRGETANVLLDKLGERLAFERTGVRLYEAVLAKLPASRTSD CCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC GDLGAPELRQLRDEEHRHMLVVTEAIEQLGGDPTAVTPCANLAGVQGLGLVQSLADPRTT CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHCCCHHHHHHHHCCHHHH LTQCLDTLLAAELIDNDGWKLLIALAEGMGQTEVAKRFTECLAEEDEHLLKVRAWVAERL HHHHHHHHHHHHHHCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EIQAGTGLPRADFGEPAQPV HHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA