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The map label for this gene is petC [H]

Identifier: 220918433

GI number: 220918433

Start: 3715703

End: 3716512

Strand: Reverse

Name: petC [H]

Synonym: A2cp1_3337

Alternate gene names: 220918433

Gene position: 3716512-3715703 (Counterclockwise)

Preceding gene: 220918434

Following gene: 220918426

Centisome position: 73.9

GC content: 78.4

Gene sequence:

>810_bases
ATGAGCGTCACCCGCCGTCAGTTCCTCGTCCGCGCGCTGGCCGGCGGCGCCGGGGCCGCCGCCGGCGCGGCGCTGCCCGC
CTGCGCGCCCGACACGTCCCCGGCCCCGCTGGTGGACGTCGCCGCGCCGGTGAACGGGCGGCTCACGCTGACGCTGTCGC
GCCATCCGGCGCTGGCGCGCCCGGGCGGCGCGGTGCGGGCGCGCGCGCCCGGGCTCGCGGATCCGGTGCTCGTGGTCCAC
GCGGCCGACGGCACCTTCGCCGCCATGTCGAGCACGTGTACGCACCAGGGCTGCCCGGTGGGCTTCGAGGGCGGCGAGGT
GATCTGCCCGTGCCACGCCTCCACCTTCGACCTGCTGGGCCGCGTCACGCGCCCGCCCGCGATCCAGGGGCTGGCGGCCT
ACGCCGCGTTCCACGACCCGGCGCTGGACGAGGTGGCGGTCGATCTCACCGCCGGAGATCCCGGGTTCCCGCGCTGGACG
GACGGCGCGGTCGTGTTCCCGCTGGCGGACTTCCCGCAGCTCGCCGCCGACGGTGGCTCGGTGGCCGGCCGGCCGGGCGG
CGCGCCGCGGCCGCTCGCGCTCGTGGTCGTGGCGCTCGCCGGCGGCGCGTACGCCGCGCTCGACGCGATCTGCACGCACC
TCGGCTGCATCGTGGGGTGGGACGCGGGGCGCGGCCAGGTGATCTGCCCGTGCCACGGCTCGCGCTACGCGCTCGACGGC
GCCGTGCAGCACGGACCGGCCACGCGCCCGCTCGGAACGTACGACGTCACCGCCGATGCCCTGGCGGTGACGGTGCACGT
CCCGGCGTGA

Upstream 100 bases:

>100_bases
TGAGCCTGGACGCGCACCAGGTCGAGCGGCCGGAGCTGCTGTTCGTGAAGGTGGACGATCGCGTCGACGTGGACGCGCGG
CTCGAGCTGGAGGTGGAGCG

Downstream 100 bases:

>100_bases
ACCCTGCGCCTCAGGGACCGGAGAGCGGCACCAGGATGTCCCCGGGGGCGCCGCGCGCGCCCTGGTGCACGTGGGCGGCG
GTCGCGCCGGTGAGGCCGGC

Product: Rieske (2Fe-2S) domain-containing protein

Products: NA

Alternate protein names: Plastohydroquinone:plastocyanin oxidoreductase iron-sulfur protein; Rieske iron-sulfur protein; ISP; RISP [H]

Number of amino acids: Translated: 269; Mature: 268

Protein sequence:

>269_residues
MSVTRRQFLVRALAGGAGAAAGAALPACAPDTSPAPLVDVAAPVNGRLTLTLSRHPALARPGGAVRARAPGLADPVLVVH
AADGTFAAMSSTCTHQGCPVGFEGGEVICPCHASTFDLLGRVTRPPAIQGLAAYAAFHDPALDEVAVDLTAGDPGFPRWT
DGAVVFPLADFPQLAADGGSVAGRPGGAPRPLALVVVALAGGAYAALDAICTHLGCIVGWDAGRGQVICPCHGSRYALDG
AVQHGPATRPLGTYDVTADALAVTVHVPA

Sequences:

>Translated_269_residues
MSVTRRQFLVRALAGGAGAAAGAALPACAPDTSPAPLVDVAAPVNGRLTLTLSRHPALARPGGAVRARAPGLADPVLVVH
AADGTFAAMSSTCTHQGCPVGFEGGEVICPCHASTFDLLGRVTRPPAIQGLAAYAAFHDPALDEVAVDLTAGDPGFPRWT
DGAVVFPLADFPQLAADGGSVAGRPGGAPRPLALVVVALAGGAYAALDAICTHLGCIVGWDAGRGQVICPCHGSRYALDG
AVQHGPATRPLGTYDVTADALAVTVHVPA
>Mature_268_residues
SVTRRQFLVRALAGGAGAAAGAALPACAPDTSPAPLVDVAAPVNGRLTLTLSRHPALARPGGAVRARAPGLADPVLVVHA
ADGTFAAMSSTCTHQGCPVGFEGGEVICPCHASTFDLLGRVTRPPAIQGLAAYAAFHDPALDEVAVDLTAGDPGFPRWTD
GAVVFPLADFPQLAADGGSVAGRPGGAPRPLALVVVALAGGAYAALDAICTHLGCIVGWDAGRGQVICPCHGSRYALDGA
VQHGPATRPLGTYDVTADALAVTVHVPA

Specific function: Component of the green S-bacteria bc-complex which consists of the Rieske protein and cytochrome b subunit and which appears to lack a cytochrome c1-equivalent. This complex has a comparatively low redox potential [H]

COG id: COG0723

COG function: function code C; Rieske Fe-S protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Rieske domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014909
- InterPro:   IPR017941
- InterPro:   IPR014349
- InterPro:   IPR005805 [H]

Pfam domain/function: PF08802 CytB6-F_Fe-S; PF00355 Rieske [H]

EC number: =1.10.99.1 [H]

Molecular weight: Translated: 26835; Mature: 26704

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: PS00199 RIESKE_1 ; PS00200 RIESKE_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSVTRRQFLVRALAGGAGAAAGAALPACAPDTSPAPLVDVAAPVNGRLTLTLSRHPALAR
CCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
PGGAVRARAPGLADPVLVVHAADGTFAAMSSTCTHQGCPVGFEGGEVICPCHASTFDLLG
CCCCEEECCCCCCCCEEEEEECCCCEEHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHH
RVTRPPAIQGLAAYAAFHDPALDEVAVDLTAGDPGFPRWTDGAVVFPLADFPQLAADGGS
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCCCC
VAGRPGGAPRPLALVVVALAGGAYAALDAICTHLGCIVGWDAGRGQVICPCHGSRYALDG
CCCCCCCCCCHHHHEEEHHCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEECC
AVQHGPATRPLGTYDVTADALAVTVHVPA
CCCCCCCCCCCCCEEECCCEEEEEEEECC
>Mature Secondary Structure 
SVTRRQFLVRALAGGAGAAAGAALPACAPDTSPAPLVDVAAPVNGRLTLTLSRHPALAR
CCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCEEEEEECCCCCCCC
PGGAVRARAPGLADPVLVVHAADGTFAAMSSTCTHQGCPVGFEGGEVICPCHASTFDLLG
CCCCEEECCCCCCCCEEEEEECCCCEEHHHCCCCCCCCCCCCCCCCEEEECCCCHHHHHH
RVTRPPAIQGLAAYAAFHDPALDEVAVDLTAGDPGFPRWTDGAVVFPLADFPQLAADGGS
HCCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCEEEEECCCCCHHHCCCCC
VAGRPGGAPRPLALVVVALAGGAYAALDAICTHLGCIVGWDAGRGQVICPCHGSRYALDG
CCCCCCCCCCHHHHEEEHHCCCHHHHHHHHHHHHHHEEECCCCCCCEEECCCCCEEEECC
AVQHGPATRPLGTYDVTADALAVTVHVPA
CCCCCCCCCCCCCEEECCCEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10976061; 12093901 [H]