| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220918363
Identifier: 220918363
GI number: 220918363
Start: 3631148
End: 3632470
Strand: Reverse
Name: 220918363
Synonym: A2cp1_3267
Alternate gene names: NA
Gene position: 3632470-3631148 (Counterclockwise)
Preceding gene: 220918364
Following gene: 220918362
Centisome position: 72.23
GC content: 70.29
Gene sequence:
>1323_bases ATGAAGTTCACGCGTATCGCAATCGTTGCAGCGTTCGCGCTCGTCTCGGGCCGGGCGTATGCGTTCCACGCCGGCGGCGT CGCCAAGTGCGAGGGCTGCCACACGATGCACAACTCGACGACGACCGGTACCGGCACCGCGTCGACCGTGCTCGGCAACA ACCCGACCGTCGGTCTGGCCAGCAAGTACCTGCTCCAGGGGCAGGACCCGAGCTCGACCTGCCTCATCTGCCACGGCCGC GCGGGCGTGAGCAGCTACCACGTCTACGAGCCGTCCCTCGCGACGGCCACCGTCGCGACCTTCGTCCCCACGATGGTGAA CTTCACCCCGGGCGGCGACTTCGCCTGGCAGGCGAACGCCGGGTTCACGACCACCGCCGGCGCCGCGGTCGCCACGAAGC GCTTCGGTCACTCGGTCATCGCGGCGGCGTACGCCGGCATGACGGCGGACTCCCGCCCGAACGCTCCGGCGGGTAACGTC GCGGGCGTGTACGACGGCGCGGCCTTCTCCTGCATCTCCTGCCACGATCCGCACAGCAAGGCGCGCATGGACGAGACCGG CGCGATCATCAACACCGGCCTCCCGATCGCCGAGTCCGGCTCTTACCCGCTGGCCGCGGCGCTGCCCGCTGGCACCGCGA TGGGCGCGTACCGCCTCCTCGCCGGCGTCGGTTACCAGCCGAAGTCCTCGCCCACGCAGCCTGCGTTCGCCGTGAACCCG CCGGTCGCCGTCGCGCCGTCGACCTACAACGTGGCCGAGACGGGCTTCGATTCCGCGACCCGCGCTGGCCAGGTCGTGGT CGCGTACGGCAACGGCATGTCCGAGTGGTGCGGCACCTGCCACCCCGGCATGCACAGCAACGACAACATCTCGGGCAGCA TCTTCAAGCACCCGGCCGGCGACCTCGCGACCATGAGCGCCACCGTGGCCGGCAACTACAACAGCTACGTGAAGTCGGGT GACCTGACCGGCACGAACGCGTACGACGCCATCGCTCCCTTCGAGCAGCACGTCGACCGCGCCACCCTGGCGACGAAGGC CGTGGGCACGGCCGGCACGCCGGACATCGCCGCCGCCGCGGGCACCAGCGGCGTGATGTGCCTCTCCTGCCACCGCGCGC ACGCGTCGCCGTACGAGTTCGCGCTGCGCTGGGCCGACGCCGAGTTCATCATCGAGAACGGCGAGTACTACGGCCGCGAG GCTGCTGCCCGCGGCGAGTGGCGCACCTCCGCGATCATCCAGGCGGGTCACCAGAACCGCCCGGCGACCGCGTACGCCAC GTTCCAGAAGTCGCTCTGCAACAAGTGCCACGCGAAGGACTAG
Upstream 100 bases:
>100_bases GACGCCGGGGCAGCTGGACAGAAGAAGTTTTCGCAGCGGAGCAGCTCAGCCGGGAACGCCAATGGTTGGCGGTCCCATTG AACGGAGCAGAGGGGACACG
Downstream 100 bases:
>100_bases TGGTCGGTTGCTGACGTAGCTCGACCGGAGGGAGCCGCGCAGCCAGCGGCTCCCTCCTTTCTTTTTTGTCCGCCGGAACG CCCCGGGACGCGCGGGCCCG
Product: cytochrome c family protein
Products: NA
Alternate protein names: Cytochrome C
Number of amino acids: Translated: 440; Mature: 440
Protein sequence:
>440_residues MKFTRIAIVAAFALVSGRAYAFHAGGVAKCEGCHTMHNSTTTGTGTASTVLGNNPTVGLASKYLLQGQDPSSTCLICHGR AGVSSYHVYEPSLATATVATFVPTMVNFTPGGDFAWQANAGFTTTAGAAVATKRFGHSVIAAAYAGMTADSRPNAPAGNV AGVYDGAAFSCISCHDPHSKARMDETGAIINTGLPIAESGSYPLAAALPAGTAMGAYRLLAGVGYQPKSSPTQPAFAVNP PVAVAPSTYNVAETGFDSATRAGQVVVAYGNGMSEWCGTCHPGMHSNDNISGSIFKHPAGDLATMSATVAGNYNSYVKSG DLTGTNAYDAIAPFEQHVDRATLATKAVGTAGTPDIAAAAGTSGVMCLSCHRAHASPYEFALRWADAEFIIENGEYYGRE AAARGEWRTSAIIQAGHQNRPATAYATFQKSLCNKCHAKD
Sequences:
>Translated_440_residues MKFTRIAIVAAFALVSGRAYAFHAGGVAKCEGCHTMHNSTTTGTGTASTVLGNNPTVGLASKYLLQGQDPSSTCLICHGR AGVSSYHVYEPSLATATVATFVPTMVNFTPGGDFAWQANAGFTTTAGAAVATKRFGHSVIAAAYAGMTADSRPNAPAGNV AGVYDGAAFSCISCHDPHSKARMDETGAIINTGLPIAESGSYPLAAALPAGTAMGAYRLLAGVGYQPKSSPTQPAFAVNP PVAVAPSTYNVAETGFDSATRAGQVVVAYGNGMSEWCGTCHPGMHSNDNISGSIFKHPAGDLATMSATVAGNYNSYVKSG DLTGTNAYDAIAPFEQHVDRATLATKAVGTAGTPDIAAAAGTSGVMCLSCHRAHASPYEFALRWADAEFIIENGEYYGRE AAARGEWRTSAIIQAGHQNRPATAYATFQKSLCNKCHAKD >Mature_440_residues MKFTRIAIVAAFALVSGRAYAFHAGGVAKCEGCHTMHNSTTTGTGTASTVLGNNPTVGLASKYLLQGQDPSSTCLICHGR AGVSSYHVYEPSLATATVATFVPTMVNFTPGGDFAWQANAGFTTTAGAAVATKRFGHSVIAAAYAGMTADSRPNAPAGNV AGVYDGAAFSCISCHDPHSKARMDETGAIINTGLPIAESGSYPLAAALPAGTAMGAYRLLAGVGYQPKSSPTQPAFAVNP PVAVAPSTYNVAETGFDSATRAGQVVVAYGNGMSEWCGTCHPGMHSNDNISGSIFKHPAGDLATMSATVAGNYNSYVKSG DLTGTNAYDAIAPFEQHVDRATLATKAVGTAGTPDIAAAAGTSGVMCLSCHRAHASPYEFALRWADAEFIIENGEYYGRE AAARGEWRTSAIIQAGHQNRPATAYATFQKSLCNKCHAKD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45291; Mature: 45291
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTRIAIVAAFALVSGRAYAFHAGGVAKCEGCHTMHNSTTTGTGTASTVLGNNPTVGLA CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCHH SKYLLQGQDPSSTCLICHGRAGVSSYHVYEPSLATATVATFVPTMVNFTPGGDFAWQANA HHHEECCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEECCC GFTTTAGAAVATKRFGHSVIAAAYAGMTADSRPNAPAGNVAGVYDGAAFSCISCHDPHSK CCEECCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHH ARMDETGAIINTGLPIAESGSYPLAAALPAGTAMGAYRLLAGVGYQPKSSPTQPAFAVNP HCCCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECC PVAVAPSTYNVAETGFDSATRAGQVVVAYGNGMSEWCGTCHPGMHSNDNISGSIFKHPAG CCEECCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEECCCC DLATMSATVAGNYNSYVKSGDLTGTNAYDAIAPFEQHVDRATLATKAVGTAGTPDIAAAA CCEEEEEEEECCCHHHEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHC GTSGVMCLSCHRAHASPYEFALRWADAEFIIENGEYYGREAAARGEWRTSAIIQAGHQNR CCCCEEEEEECCCCCCCHHEEEEECCEEEEEECCCCCCCHHHCCCCCHHHHHHHCCCCCC PATAYATFQKSLCNKCHAKD CCHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MKFTRIAIVAAFALVSGRAYAFHAGGVAKCEGCHTMHNSTTTGTGTASTVLGNNPTVGLA CCCHHHHHHHHHHHHCCCEEEEECCCCCCCCCCHHCCCCCCCCCCCEEEEECCCCCCCHH SKYLLQGQDPSSTCLICHGRAGVSSYHVYEPSLATATVATFVPTMVNFTPGGDFAWQANA HHHEECCCCCCCEEEEEECCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCCCEEEECCC GFTTTAGAAVATKRFGHSVIAAAYAGMTADSRPNAPAGNVAGVYDGAAFSCISCHDPHSK CCEECCCHHHHHHHHCHHHHHHHHHCCCCCCCCCCCCCCCCEEECCCEEEEEECCCCCHH ARMDETGAIINTGLPIAESGSYPLAAALPAGTAMGAYRLLAGVGYQPKSSPTQPAFAVNP HCCCCCCCEEECCCCCCCCCCCCEEEECCCCHHHHHHHHHHHCCCCCCCCCCCCEEEECC PVAVAPSTYNVAETGFDSATRAGQVVVAYGNGMSEWCGTCHPGMHSNDNISGSIFKHPAG CCEECCCCCCHHHCCCCCCCCCCEEEEEECCCHHHHHCCCCCCCCCCCCCCCEEEECCCC DLATMSATVAGNYNSYVKSGDLTGTNAYDAIAPFEQHVDRATLATKAVGTAGTPDIAAAA CCEEEEEEEECCCHHHEECCCCCCCCCCHHHCCHHHHHHHHHHHHHHCCCCCCCCHHHHC GTSGVMCLSCHRAHASPYEFALRWADAEFIIENGEYYGREAAARGEWRTSAIIQAGHQNR CCCCEEEEEECCCCCCCHHEEEEECCEEEEEECCCCCCCHHHCCCCCHHHHHHHCCCCCC PATAYATFQKSLCNKCHAKD CCHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA