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The map label for this gene is 220918294

Identifier: 220918294

GI number: 220918294

Start: 3541339

End: 3542772

Strand: Reverse

Name: 220918294

Synonym: A2cp1_3197

Alternate gene names: NA

Gene position: 3542772-3541339 (Counterclockwise)

Preceding gene: 220918299

Following gene: 220918292

Centisome position: 70.44

GC content: 72.66

Gene sequence:

>1434_bases
ATGCGCGAGCCCGGCCAGCACCTCGGCGCCAAGGTCCGGGCGCTCCGGCGCCAGCGCAACCTCACCCAGGTCCAGCTCGC
CGATCGGCTCGGCATCTCCGCGAGCTACCTGACCCTCATCGAGCACAACCGTCGCCCCCTGCCCGCGCTGCTCCTCATCA
AGCTCGCGGACCTGTTCCAGCTCGACCTGAAGTCGCTCTCGACCGAGAACCACGCGCGGGTGGTGGCGGACCTGATGGAG
GTGTTCGGGGATCCGCTGTTCGAGGCGCACGACGTCACCAACGCGGAGGTGCGGGACCTCGCCTCCTCGTCCCCCACCGC
CGCCCGCGCGGTCCTGGCGCTCTACCAGGCGTACCGCGGGGCGCGGGAGGCTTCCGACACGCTCGCCGCGACGCTCTCCG
ACGGCGACCTCGACGGCGTGGACTCGTCGCACCTGCCCACCGAGGAGGTCTCGGACCTCGTCCAGCGGCACATGAACCAC
TTCCCGGAGCTGGAGGCGGGGAGCGAGGCGCTCTGGCGCGAGGCGCGGCTCGACCCGGACTACCTGTACACGAGCCTGGT
GCGCTTCCTCGGCCAGCTCGGCGTGACCGTGCGGATCGTCCACACCGCCGAGGCGGGCGGCGCGGTGCGGCGCTACGACC
CCGAGGCGAAGGTCCTCTCCCTCTCGGAGCTGCTCCGCCGCGGCAGCCGCAACTTCCAGCTCGCCTACCAGATCGGCCTG
CTCACGCAGGCGGACGTGCTCGATCGCTTCGTGGCCGACCCGCACCTCACCAGCGACTCGTCGCGCGCGCTCGCCCGCGT
GGCGCTCGCGAACTACTTCGCGGCGGCGGTGCTCATGCCGTACGGGCCGTTCCTGGAGCAGGCGCGCGCCGAGCGCTACG
ACCTCGACCTGCTCGGCCACCGCTTCCGCACCAGCTTCGAGCAGGTGTGCCACCGGCTCACCACGCTGCGGCGGCCCGGC
GCCGAGGGCGTCCCGTTCCACCTCGTCCGCGTGGACATCGCCGGGAACATCTCCAAGCGGTTCTCCGCCTCCGGCCTCCG
CTTCGCCCGCTTCTCCGGCGCCTGCCCGCGCTGGAACCTGTTCGAGGCGTTCACCACCCCGGGCCTGGTGCGCACGCAGC
TCTCGCAGATGCCCGACGGCGCGACCTACTTCTGGATCGCGCGCACCGTCAACCGCGAGGGCGGCGGGTTCCACGCGCCG
CGCTCGGTGCTCGCCATCGCCATGGGGTGCGAGGCCTCGCGCGCCCGCGAGCTGGTCTACGCGGACGGCGTGAACCTCGA
GGCGCGCGAGGCGGTGGTGCCGGTGGGCCTGACGTGCAGGCTGTGCGAGCGGATGGACTGCGAGCAGCGGGCGTTCCCGC
CGCTGCAGCATCCGCTCAAGGTGAACGCGGACGTCCGCGGCGTGTCGTTCTACGCGCCGGTCCAGGGCCGCTGA

Upstream 100 bases:

>100_bases
CCGTCCGCCCGGCAGCCCGCCGCTCGCGGTCGTTCCTCCCCGCCCGACCCGGCGCGGGGACGGCGCCCCGAGCGGCGCGC
GCGGCGGCGAGGAGACCGCC

Downstream 100 bases:

>100_bases
CGCCGCGCCCCCGGACCGGATCCGGCCTAGCCGGCCACCTCCAGCCGCTCCGCCGCGCGCTCCAGCAGGATGGGCCGGGC
GGCGGGGCGCTCGGCGGCGC

Product: XRE family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 477; Mature: 477

Protein sequence:

>477_residues
MREPGQHLGAKVRALRRQRNLTQVQLADRLGISASYLTLIEHNRRPLPALLLIKLADLFQLDLKSLSTENHARVVADLME
VFGDPLFEAHDVTNAEVRDLASSSPTAARAVLALYQAYRGAREASDTLAATLSDGDLDGVDSSHLPTEEVSDLVQRHMNH
FPELEAGSEALWREARLDPDYLYTSLVRFLGQLGVTVRIVHTAEAGGAVRRYDPEAKVLSLSELLRRGSRNFQLAYQIGL
LTQADVLDRFVADPHLTSDSSRALARVALANYFAAAVLMPYGPFLEQARAERYDLDLLGHRFRTSFEQVCHRLTTLRRPG
AEGVPFHLVRVDIAGNISKRFSASGLRFARFSGACPRWNLFEAFTTPGLVRTQLSQMPDGATYFWIARTVNREGGGFHAP
RSVLAIAMGCEASRARELVYADGVNLEAREAVVPVGLTCRLCERMDCEQRAFPPLQHPLKVNADVRGVSFYAPVQGR

Sequences:

>Translated_477_residues
MREPGQHLGAKVRALRRQRNLTQVQLADRLGISASYLTLIEHNRRPLPALLLIKLADLFQLDLKSLSTENHARVVADLME
VFGDPLFEAHDVTNAEVRDLASSSPTAARAVLALYQAYRGAREASDTLAATLSDGDLDGVDSSHLPTEEVSDLVQRHMNH
FPELEAGSEALWREARLDPDYLYTSLVRFLGQLGVTVRIVHTAEAGGAVRRYDPEAKVLSLSELLRRGSRNFQLAYQIGL
LTQADVLDRFVADPHLTSDSSRALARVALANYFAAAVLMPYGPFLEQARAERYDLDLLGHRFRTSFEQVCHRLTTLRRPG
AEGVPFHLVRVDIAGNISKRFSASGLRFARFSGACPRWNLFEAFTTPGLVRTQLSQMPDGATYFWIARTVNREGGGFHAP
RSVLAIAMGCEASRARELVYADGVNLEAREAVVPVGLTCRLCERMDCEQRAFPPLQHPLKVNADVRGVSFYAPVQGR
>Mature_477_residues
MREPGQHLGAKVRALRRQRNLTQVQLADRLGISASYLTLIEHNRRPLPALLLIKLADLFQLDLKSLSTENHARVVADLME
VFGDPLFEAHDVTNAEVRDLASSSPTAARAVLALYQAYRGAREASDTLAATLSDGDLDGVDSSHLPTEEVSDLVQRHMNH
FPELEAGSEALWREARLDPDYLYTSLVRFLGQLGVTVRIVHTAEAGGAVRRYDPEAKVLSLSELLRRGSRNFQLAYQIGL
LTQADVLDRFVADPHLTSDSSRALARVALANYFAAAVLMPYGPFLEQARAERYDLDLLGHRFRTSFEQVCHRLTTLRRPG
AEGVPFHLVRVDIAGNISKRFSASGLRFARFSGACPRWNLFEAFTTPGLVRTQLSQMPDGATYFWIARTVNREGGGFHAP
RSVLAIAMGCEASRARELVYADGVNLEAREAVVPVGLTCRLCERMDCEQRAFPPLQHPLKVNADVRGVSFYAPVQGR

Specific function: Unknown

COG id: COG3800

COG function: function code R; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH cro/C1-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018653
- InterPro:   IPR010359
- InterPro:   IPR001387
- InterPro:   IPR010982 [H]

Pfam domain/function: PF09856 DUF2083; PF06114 DUF955; PF01381 HTH_3 [H]

EC number: NA

Molecular weight: Translated: 52913; Mature: 52913

Theoretical pI: Translated: 7.92; Mature: 7.92

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MREPGQHLGAKVRALRRQRNLTQVQLADRLGISASYLTLIEHNRRPLPALLLIKLADLFQ
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
LDLKSLSTENHARVVADLMEVFGDPLFEAHDVTNAEVRDLASSSPTAARAVLALYQAYRG
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC
AREASDTLAATLSDGDLDGVDSSHLPTEEVSDLVQRHMNHFPELEAGSEALWREARLDPD
HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHH
YLYTSLVRFLGQLGVTVRIVHTAEAGGAVRRYDPEAKVLSLSELLRRGSRNFQLAYQIGL
HHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEEEEECC
LTQADVLDRFVADPHLTSDSSRALARVALANYFAAAVLMPYGPFLEQARAERYDLDLLGH
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH
RFRTSFEQVCHRLTTLRRPGAEGVPFHLVRVDIAGNISKRFSASGLRFARFSGACPRWNL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHCCCCCEEEHHCCCCCCCCH
FEAFTTPGLVRTQLSQMPDGATYFWIARTVNREGGGFHAPRSVLAIAMGCEASRARELVY
HHHHCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHEEE
ADGVNLEAREAVVPVGLTCRLCERMDCEQRAFPPLQHPLKVNADVRGVSFYAPVQGR
ECCCCCCHHHEEECCCHHHHHHHHCCCHHHCCCCCCCCEECCCCCCCEEEECCCCCC
>Mature Secondary Structure
MREPGQHLGAKVRALRRQRNLTQVQLADRLGISASYLTLIEHNRRPLPALLLIKLADLFQ
CCCCHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHH
LDLKSLSTENHARVVADLMEVFGDPLFEAHDVTNAEVRDLASSSPTAARAVLALYQAYRG
HHHHHCCCCHHHHHHHHHHHHHCCCCHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHC
AREASDTLAATLSDGDLDGVDSSHLPTEEVSDLVQRHMNHFPELEAGSEALWREARLDPD
HHHHHHHHEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHH
YLYTSLVRFLGQLGVTVRIVHTAEAGGAVRRYDPEAKVLSLSELLRRGSRNFQLAYQIGL
HHHHHHHHHHHHCCCEEEEEEECCCCCCCEECCCCHHHHHHHHHHHCCCCCEEEEEEECC
LTQADVLDRFVADPHLTSDSSRALARVALANYFAAAVLMPYGPFLEQARAERYDLDLLGH
CCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHHHHHH
RFRTSFEQVCHRLTTLRRPGAEGVPFHLVRVDIAGNISKRFSASGLRFARFSGACPRWNL
HHHHHHHHHHHHHHHHCCCCCCCCCEEEEEEEECCCCHHHHCCCCCEEEHHCCCCCCCCH
FEAFTTPGLVRTQLSQMPDGATYFWIARTVNREGGGFHAPRSVLAIAMGCEASRARELVY
HHHHCCCCHHHHHHHHCCCCCEEEEEEEEECCCCCCCCCCHHHHHHHHCCCHHHHHHEEE
ADGVNLEAREAVVPVGLTCRLCERMDCEQRAFPPLQHPLKVNADVRGVSFYAPVQGR
ECCCCCCHHHEEECCCHHHHHHHHCCCHHHCCCCCCCCEECCCCCCCEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]