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The map label for this gene is flgC [H]

Identifier: 220917656

GI number: 220917656

Start: 2836162

End: 2836584

Strand: Direct

Name: flgC [H]

Synonym: A2cp1_2557

Alternate gene names: 220917656

Gene position: 2836162-2836584 (Clockwise)

Preceding gene: 220917655

Following gene: 220917657

Centisome position: 56.39

GC content: 74.94

Gene sequence:

>423_bases
ATGGACTTCCTCTCCGCCCTGAACGTCAGCGCGTCCGGCCTCGCCGCCGAGCGCGTCCGCGTCAACCTCGCCGCCTCCAA
CCTGGCGAACGCCGAGACCACCCGCGGCCCGGACGGCCAGCCCTATCGCCGGCTCGACCCGGTGCTCGAGGCGGTGCCGT
TCGACGCCGCGCTGGGCGCGGCCGGCCCGGCCCCCTCCGGCGTGCGCGTGGCCGCCATCGCCGAGGGCGACGGCCCCGGG
CGCCGCGTGTTCAGCCCGGCCCACCCGGACGCCGACCCCGACGGCTTCGTGACGCTCCCCGACGTCAACCCGGTGCACGA
GATCGTGAACCTCATGTCGGCCCAGAAGGCCTACGAGGCGAACGCCACCGCGGTGGACACGCTCAAGACGATGGCGCAGC
GCGCCCTCGAGATCGCGAGGTAG

Upstream 100 bases:

>100_bases
AACGCCATCCAGTACGGCGCGGCCGCCCGGGCCGCCGCCAAGAAGCTCGCCATCCTCCGCTACGTCGCCTCGGACGGCGC
GGCCTAGCCCGGGAGCTGCC

Downstream 100 bases:

>100_bases
GCCATGGACGGCATCCGCGGCATCGGCCCGGCCCTCTACCAGCCCGCGGCGGCGCCGGCGGCGCGGCCGGAGGGCGGCAC
CTTCGGGCGCGCGCTCGGCG

Product: flagellar basal-body rod protein FlgC

Products: NA

Alternate protein names: Putative proximal rod protein [H]

Number of amino acids: Translated: 140; Mature: 140

Protein sequence:

>140_residues
MDFLSALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALGAAGPAPSGVRVAAIAEGDGPG
RRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRALEIAR

Sequences:

>Translated_140_residues
MDFLSALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALGAAGPAPSGVRVAAIAEGDGPG
RRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRALEIAR
>Mature_140_residues
MDFLSALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALGAAGPAPSGVRVAAIAEGDGPG
RRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYEANATAVDTLKTMAQRALEIAR

Specific function: Unknown

COG id: COG1558

COG function: function code N; Flagellar basal body rod protein

Gene ontology:

Cell location: Bacterial flagellum basal body [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the flagella basal body rod proteins family [H]

Homologues:

Organism=Escherichia coli, GI1787314, Length=140, Percent_Identity=41.4285714285714, Blast_Score=110, Evalue=3e-26,

Paralogues:

None

Copy number: 10-20 (rich media) [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010930
- InterPro:   IPR001444
- InterPro:   IPR019776
- InterPro:   IPR006299 [H]

Pfam domain/function: PF06429 DUF1078; PF00460 Flg_bb_rod [H]

EC number: NA

Molecular weight: Translated: 14514; Mature: 14514

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: PS00018 EF_HAND_1 ; PS00588 FLAGELLA_BB_ROD

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDFLSALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALGA
CCCHHHCCCCCCCCCHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCC
AGPAPSGVRVAAIAEGDGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYEA
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
NATAVDTLKTMAQRALEIAR
CCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDFLSALNVSASGLAAERVRVNLAASNLANAETTRGPDGQPYRRLDPVLEAVPFDAALGA
CCCHHHCCCCCCCCCHHHHEEEHHHHCCCCCCCCCCCCCCCHHHHHHHHHHCCCCHHCCC
AGPAPSGVRVAAIAEGDGPGRRVFSPAHPDADPDGFVTLPDVNPVHEIVNLMSAQKAYEA
CCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHCC
NATAVDTLKTMAQRALEIAR
CCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]