Click here to switch to the map view.

The map label for this gene is 220917592

Identifier: 220917592

GI number: 220917592

Start: 2752244

End: 2752831

Strand: Direct

Name: 220917592

Synonym: A2cp1_2492

Alternate gene names: NA

Gene position: 2752244-2752831 (Clockwise)

Preceding gene: 220917589

Following gene: 220917594

Centisome position: 54.72

GC content: 76.19

Gene sequence:

>588_bases
ATGGAGACTCCGCTGCAGCTGGCGTGGATTCACGTGGAGCCCTCGGAGCCGCTGGCCGAGCGCGTGCGCGAGGCGGTGCG
GCGGCTCGAGCGATTCCACGGGCGCATCACCGGGTGCACGGTCGCGCTGGAGGCGCCCAGCCGTCATCACCGCAACACCG
GCGCCCAGTACCGGGTCCGCATCGAGGTGAGGTTCCCGGGGGGCCGCGCGGTGGTGGGCCGCGCGCCGCCCAGGAGCCGC
GACCGCGCCGACCTGTACACGGCCGTGAACGCCGCGTTCCGCGACGTGCGGCGCCAGCTCGAGGACCGGCAGCGCCGCAT
GGACGGCCGCGTGAAGGCGCACGAGTCGCCGCCGCGCGGGGTGGTCGCGCGGATCTTCCACGGCGAAGGCTTCGGCTTCC
TGCGGACGCCGGACGACCGCGAGATCTACTTCGACGCCCGGAGCGTGCTGCGCGGAGGCTTCGGCCGCCTGGAGATCGGC
AGCCCGGTGCGCTTCGTGGAGGAGCCCGGCGAGGAGGGGCCGCAGGCGAGCACGGTCGCGCTCCTGCGCCGGCGCGCGCC
CGGGCCCGCGGCGCCGACGCAGCCCTGA

Upstream 100 bases:

>100_bases
GCCCGGCCGCCCGCCGCGCCGCCGCGGTCGGCTCCCCGAAGGGCCCGGCCTGGCGCGGCGACCCCCGGGTACGATCCGGA
TGACCACGCAGGAGGTGATC

Downstream 100 bases:

>100_bases
GCGGCGGGCACGGCCGTCGCCGCCCGTGAACAGCACCGGGCCGGCCCGCGCGTGGCGAGCCGGCCCGGCGACGGCGGTCG
TGCAGCGAGGAGCTACTTCG

Product: Cold-shock protein DNA-binding

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 195; Mature: 195

Protein sequence:

>195_residues
METPLQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHHRNTGAQYRVRIEVRFPGGRAVVGRAPPRSR
DRADLYTAVNAAFRDVRRQLEDRQRRMDGRVKAHESPPRGVVARIFHGEGFGFLRTPDDREIYFDARSVLRGGFGRLEIG
SPVRFVEEPGEEGPQASTVALLRRRAPGPAAPTQP

Sequences:

>Translated_195_residues
METPLQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHHRNTGAQYRVRIEVRFPGGRAVVGRAPPRSR
DRADLYTAVNAAFRDVRRQLEDRQRRMDGRVKAHESPPRGVVARIFHGEGFGFLRTPDDREIYFDARSVLRGGFGRLEIG
SPVRFVEEPGEEGPQASTVALLRRRAPGPAAPTQP
>Mature_195_residues
METPLQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHHRNTGAQYRVRIEVRFPGGRAVVGRAPPRSR
DRADLYTAVNAAFRDVRRQLEDRQRRMDGRVKAHESPPRGVVARIFHGEGFGFLRTPDDREIYFDARSVLRGGFGRLEIG
SPVRFVEEPGEEGPQASTVALLRRRAPGPAAPTQP

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21998; Mature: 21998

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
METPLQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHHRNTGAQYRVR
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEE
IEVRFPGGRAVVGRAPPRSRDRADLYTAVNAAFRDVRRQLEDRQRRMDGRVKAHESPPRG
EEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
VVARIFHGEGFGFLRTPDDREIYFDARSVLRGGFGRLEIGSPVRFVEEPGEEGPQASTVA
EEEEEEECCCCEECCCCCCCEEEEEHHHHHHCCCCEEECCCCHHHHCCCCCCCCCHHHHH
LLRRRAPGPAAPTQP
HHHHCCCCCCCCCCC
>Mature Secondary Structure
METPLQLAWIHVEPSEPLAERVREAVRRLERFHGRITGCTVALEAPSRHHRNTGAQYRVR
CCCCEEEEEEEECCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEECCCCCCCCCCCEEEEE
IEVRFPGGRAVVGRAPPRSRDRADLYTAVNAAFRDVRRQLEDRQRRMDGRVKAHESPPRG
EEEECCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECCCCCCCC
VVARIFHGEGFGFLRTPDDREIYFDARSVLRGGFGRLEIGSPVRFVEEPGEEGPQASTVA
EEEEEEECCCCEECCCCCCCEEEEEHHHHHHCCCCEEECCCCHHHHCCCCCCCCCHHHHH
LLRRRAPGPAAPTQP
HHHHCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA