Click here to switch to the map view.

The map label for this gene is imuB [H]

Identifier: 220917437

GI number: 220917437

Start: 2593473

End: 2595092

Strand: Reverse

Name: imuB [H]

Synonym: A2cp1_2337

Alternate gene names: 220917437

Gene position: 2595092-2593473 (Counterclockwise)

Preceding gene: 220917438

Following gene: 220917436

Centisome position: 51.6

GC content: 81.85

Gene sequence:

>1620_bases
ATGCCGCGTGAGCCGGTCGCCCCGCGGGTGGTGGCGCTGCAGCTCCCCGATCTCCCGCTCCAGCGCGTCCTGCGCGGGCG
CGAGCGCGCCGCCCGCGGGCTCGCGGCGCTCGTCGCAGTCCTCGAGGAAGGGCGGGTGGTGTGCTGTACCCCGGCCGCAC
GCGCCGCCGGCGTGCGTCCCGGCCAGTCCGCGGCCGAGGCGCTCGCCGCCTGCGGACGGCTCGAGACGGTGGTGCGGGAT
GCCGCCGCGGACCTCGCCGCGCTGCGCGCGCTCGCCGAGGTCCTGCTCGGGATCGCCCCCGCCGTCGAGGTGGCGGCGCC
CGACGCGCTGCTGCTGGATGCGGGCGCCGCGCGCCTGCTCGCGGCCGGCCCCGGCACGGGCGCAGCGTCGGCGGCGTTCG
GGCCGGGCGAGGAGCGGCTGGCGCGCCGGGCGGTGCAGGCCGCCGTGGACATGGGCTACGCCGCGCGCGCCGTGGTGGCG
ACCGGGCGAGGGCCGGCGACGGCCCTGGCGCGGCACGGGCGCTTCGACGGCGCGGTCCACGGGGTCGCGCCCGGGGGCGC
CGCGGCGGCGGCCGCGCTGGCGGGCCTCCCGCTCGCGGCGCTCGGGCTGGCGCCGGCGGTCGCCGGCCGGCTGGCGGCGG
TGGGGGTGGGGGACGCGGGCGCGCTGGCGCGGCTGCCGGAGGGCACGCTCGCGCACCGGTTCGGGCCGGAGGGCGTGCGC
GCGGCGCGGCTGGCCCGCGGCGAGGACGTGTCGCCGCTCGTGCCGCACGTGCCGGAGACGCTCCCCCAGGAGTCGCTGGA
GCTGGAGGCGCCGGCGGAGAGCGCCGAGCCGCTGCTGTTCGGGCTGAAGCGGCTCGCGGATCGGGTGGCGGCGCGGCTGG
CCGGGCGTGGGCTCGGGGCGACCCGCCTGCGCCTCGTGCTCGCGCTCGACCCGCGCGGCGAAGAGCGGATCCAGGTGCCG
CTCTCGCAGCCCAGCGCGTCTGCGGCGCGCTGGCTCGTCCCGGTGAAGGAGCACCTGTTCGCGCTCCGGCTGCCCGGCGC
CGTGACGGCGCTGCGGCTCGTGGCCGCCGAGGTGGCGCCGGTGGCCGCCGAGCAGCTCGCGTTCGGCGACCGGCCGGAGG
CGGTCGCCGCGCTGGAGGGCGTGCTGGCGCGCCTCGCGGTGCGGCTCGGGGACGGCGCGCTGTTCGCGGCCGAGCCGGTG
GCGCGCTACCGCCCGGAGGGCGCCTACCGGCCGGTGCCGTTCCGGCCCAGGGCGCCGAGCGGCCCCGGTCGCGCGCCCGC
TCGCCCTCCGGCGGGCCCGGGGCGGGCGGCGCCGTCCGCAGGCGCGGAGGCGCGCGGGGCTGGGCAGGACGGCGAGGCCG
CGTTCCGGCCCACCCGGCTGCTCGCCGCGCCGGAGCAGGTGGTCGCCGAGGGCGAGGGCGGCCGGCTCACCGCGCTGCGG
GTGGGTGGGCGCGACCGCGCGGTGCTCGCGCTGGAGGGCCCGGAGCGGCTCCGCGGCGAGTGGTGGGCCGGCGGGTTCGA
CCGCGACTACTACCGCGTCCGGCTGGACGGGCTCGGCGACTGCTGGGTGTACCGCGACGGCGCCGACGGGCGGCTGTGGC
TGCACGGGTTCTTCGACTGA

Upstream 100 bases:

>100_bases
CTGCGGGTGCCCGCGGCGCTCCGGCTCGAGCTCTCGTGCGAGGGCGGGCGCCTGGTGGCCCGCCGGGCGATGGGCGGCGC
GGTGGCGGGGAGGGCGGGCC

Downstream 100 bases:

>100_bases
TCGCCGAGGCGCGCCATGTCCCACGCTCCCCGCTACGCCGAGCTCCGCTGCAAGTCCTGCTTCTCCTTCCTGGAGGGCGC
GAGCCACCCCGAGGAGCTGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 539; Mature: 538

Protein sequence:

>539_residues
MPREPVAPRVVALQLPDLPLQRVLRGRERAARGLAALVAVLEEGRVVCCTPAARAAGVRPGQSAAEALAACGRLETVVRD
AAADLAALRALAEVLLGIAPAVEVAAPDALLLDAGAARLLAAGPGTGAASAAFGPGEERLARRAVQAAVDMGYAARAVVA
TGRGPATALARHGRFDGAVHGVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVR
AARLARGEDVSPLVPHVPETLPQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVLALDPRGEERIQVP
LSQPSASAARWLVPVKEHLFALRLPGAVTALRLVAAEVAPVAAEQLAFGDRPEAVAALEGVLARLAVRLGDGALFAAEPV
ARYRPEGAYRPVPFRPRAPSGPGRAPARPPAGPGRAAPSAGAEARGAGQDGEAAFRPTRLLAAPEQVVAEGEGGRLTALR
VGGRDRAVLALEGPERLRGEWWAGGFDRDYYRVRLDGLGDCWVYRDGADGRLWLHGFFD

Sequences:

>Translated_539_residues
MPREPVAPRVVALQLPDLPLQRVLRGRERAARGLAALVAVLEEGRVVCCTPAARAAGVRPGQSAAEALAACGRLETVVRD
AAADLAALRALAEVLLGIAPAVEVAAPDALLLDAGAARLLAAGPGTGAASAAFGPGEERLARRAVQAAVDMGYAARAVVA
TGRGPATALARHGRFDGAVHGVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVR
AARLARGEDVSPLVPHVPETLPQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVLALDPRGEERIQVP
LSQPSASAARWLVPVKEHLFALRLPGAVTALRLVAAEVAPVAAEQLAFGDRPEAVAALEGVLARLAVRLGDGALFAAEPV
ARYRPEGAYRPVPFRPRAPSGPGRAPARPPAGPGRAAPSAGAEARGAGQDGEAAFRPTRLLAAPEQVVAEGEGGRLTALR
VGGRDRAVLALEGPERLRGEWWAGGFDRDYYRVRLDGLGDCWVYRDGADGRLWLHGFFD
>Mature_538_residues
PREPVAPRVVALQLPDLPLQRVLRGRERAARGLAALVAVLEEGRVVCCTPAARAAGVRPGQSAAEALAACGRLETVVRDA
AADLAALRALAEVLLGIAPAVEVAAPDALLLDAGAARLLAAGPGTGAASAAFGPGEERLARRAVQAAVDMGYAARAVVAT
GRGPATALARHGRFDGAVHGVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVRA
ARLARGEDVSPLVPHVPETLPQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGATRLRLVLALDPRGEERIQVPL
SQPSASAARWLVPVKEHLFALRLPGAVTALRLVAAEVAPVAAEQLAFGDRPEAVAALEGVLARLAVRLGDGALFAAEPVA
RYRPEGAYRPVPFRPRAPSGPGRAPARPPAGPGRAAPSAGAEARGAGQDGEAAFRPTRLLAAPEQVVAEGEGGRLTALRV
GGRDRAVLALEGPERLRGEWWAGGFDRDYYRVRLDGLGDCWVYRDGADGRLWLHGFFD

Specific function: Along with dnaE2 and imuA is required for the error- prone processing of DNA lesions [H]

COG id: COG0389

COG function: function code L; Nucleotidyltransferase/DNA polymerase involved in DNA repair

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001126 [H]

Pfam domain/function: PF00817 IMS [H]

EC number: NA

Molecular weight: Translated: 55233; Mature: 55102

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPREPVAPRVVALQLPDLPLQRVLRGRERAARGLAALVAVLEEGRVVCCTPAARAAGVRP
CCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCC
GQSAAEALAACGRLETVVRDAAADLAALRALAEVLLGIAPAVEVAAPDALLLDAGAARLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEE
AAGPGTGAASAAFGPGEERLARRAVQAAVDMGYAARAVVATGRGPATALARHGRFDGAVH
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHCCCCCCCEE
GVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVR
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCHHHCCCCCHHH
AARLARGEDVSPLVPHVPETLPQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TRLRLVLALDPRGEERIQVPLSQPSASAARWLVPVKEHLFALRLPGAVTALRLVAAEVAP
EEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH
VAAEQLAFGDRPEAVAALEGVLARLAVRLGDGALFAAEPVARYRPEGAYRPVPFRPRAPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCCCC
GPGRAPARPPAGPGRAAPSAGAEARGAGQDGEAAFRPTRLLAAPEQVVAEGEGGRLTALR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCEEEEEE
VGGRDRAVLALEGPERLRGEWWAGGFDRDYYRVRLDGLGDCWVYRDGADGRLWLHGFFD
ECCCCCEEEEECCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCC
>Mature Secondary Structure 
PREPVAPRVVALQLPDLPLQRVLRGRERAARGLAALVAVLEEGRVVCCTPAARAAGVRP
CCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCHHHHCCCCC
GQSAAEALAACGRLETVVRDAAADLAALRALAEVLLGIAPAVEVAAPDALLLDAGAARLL
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHCCCCEEEECCCCCEEE
AAGPGTGAASAAFGPGEERLARRAVQAAVDMGYAARAVVATGRGPATALARHGRFDGAVH
ECCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCHHHEEEEECCCCCHHHHHHCCCCCCCEE
GVAPGGAAAAAALAGLPLAALGLAPAVAGRLAAVGVGDAGALARLPEGTLAHRFGPEGVR
CCCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHEECCCCCHHHHCCCCCCHHHCCCCCHHH
AARLARGEDVSPLVPHVPETLPQESLELEAPAESAEPLLFGLKRLADRVAARLAGRGLGA
HHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCC
TRLRLVLALDPRGEERIQVPLSQPSASAARWLVPVKEHLFALRLPGAVTALRLVAAEVAP
EEEEEEEEECCCCCCEEEEECCCCCCCHHHHHHHHHHHHEEEECCHHHHHHHHHHHHHHH
VAAEQLAFGDRPEAVAALEGVLARLAVRLGDGALFAAEPVARYRPEGAYRPVPFRPRAPS
HHHHHHHCCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCHHHHCCCCCCCCCCCCCCCCC
GPGRAPARPPAGPGRAAPSAGAEARGAGQDGEAAFRPTRLLAAPEQVVAEGEGGRLTALR
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCCHHHHHCCCCCEEEEEE
VGGRDRAVLALEGPERLRGEWWAGGFDRDYYRVRLDGLGDCWVYRDGADGRLWLHGFFD
ECCCCCEEEEECCHHHHCCCCCCCCCCCCEEEEEECCCCCEEEEECCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA