| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
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The map label for this gene is 220917330
Identifier: 220917330
GI number: 220917330
Start: 2473038
End: 2474090
Strand: Reverse
Name: 220917330
Synonym: A2cp1_2230
Alternate gene names: NA
Gene position: 2474090-2473038 (Counterclockwise)
Preceding gene: 220917331
Following gene: 220917329
Centisome position: 49.19
GC content: 79.39
Gene sequence:
>1053_bases ATGGCGGGGGTGGCGCTCATCACGGGCTCCGGCGGCGCCGTGGCCGACGCGGTCGCGGCCGAGCTCGCGCGCGCCGGCTG GAGCCCGCGCCCCGTGGCGCTCTCCGCCGAGGGCTTCGGCGCCGCGGGCGAGGCGCCGGCCCGCGCGGTGGTGCACCTCG GCGTGCGGACCCCCCGCGACCTGCCCGAGCCCGCCCGCATCGCGGTGGAGGCCGGCGCCGCGCGCGCCGCCGCCGAGCTG GCGCGCCGTGCCGGCGCCGGGCGGCTGGTCCACGTCTCCACCGCCGGCGTGTACGGACGCCCCCGCAACCTGCCCTGCCG CGAGGGCGAGCTGAAGGCGCCGCGCACCGCGCACGAGCGGGTCCGCTGGGCGGCGGAGCAGGCGAGCTGGGCCGCCTTCC GCAAGGGGGCACCGCTCACGGTGCTCCGCCCCACGGTGCTCTACGGTCCGTCGCTGCGCGGCGGCCCGCTGCGCGTGCTC GCGCTGGTGGCGCTCTTCAACCAGCGGCGGCGGCGCGTGCCCATCATCCGCCGCGGGCCGGTGGCGCACCTGCTCCACCT CGACGACCTCGCGCGAGCGGTGGTCCACGTGCTCGACCACCCGGACGCGGAGGCGGTGCGGGGCCGCGCCTTCAACGTGG CCGACGAGGCGCCGCTGCCGCTCGCCGAGCACCTCGCCGCCGCGCTCACCGCCCTCGGCTACGAGCCGGGCCGCATCCTG CCGACCGCCCCGCGGCTCACCTCGGCGCTGCTCTGGCTGGTGCGCCACGTGCCGGATCGCGCGCTGCTCGCCCGCGTCAA CGGGCGGCTGGCGCGCGGATGGGGGCGGCTCTCGTCCCGCACCGGCGTGGGGCCGGCGCTCGTCCCGCGCATCGAGCGCG AGGCGCTCCACTGGATGAGCGCGGACCACTACTACGACACCTCGCGCATCGAGGCCCTCGGCTGGCGCCCGCGCCACCCG ATCTCGACCGCGGCCATGCCGGAGACCGTGCGCGCGCTGGTGTCGGATCACCTGCTCCCCGGCTCAGGGGCGGGTGCCCT GCCCGCCTGGTAG
Upstream 100 bases:
>100_bases TAGGTCCAGGTCCCCGCCGGCAGGCCCCCGGGCATGCTTCGACGGGGCCACGGCGCTCGGGGCGGCGCGGTCCGCCCCGG GCGCCTGCTACACTCGCGGC
Downstream 100 bases:
>100_bases GGGGGCACGTCCCACCCGCCCCTGACCGCGGTGGACGACTTGTGGCCGGGCCCGGGCGGCCGTGTCATAGTGGCGCCCCT CACCCCGCCACGGATGTCGT
Product: NAD-dependent epimerase/dehydratase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 350; Mature: 349
Protein sequence:
>350_residues MAGVALITGSGGAVADAVAAELARAGWSPRPVALSAEGFGAAGEAPARAVVHLGVRTPRDLPEPARIAVEAGAARAAAEL ARRAGAGRLVHVSTAGVYGRPRNLPCREGELKAPRTAHERVRWAAEQASWAAFRKGAPLTVLRPTVLYGPSLRGGPLRVL ALVALFNQRRRRVPIIRRGPVAHLLHLDDLARAVVHVLDHPDAEAVRGRAFNVADEAPLPLAEHLAAALTALGYEPGRIL PTAPRLTSALLWLVRHVPDRALLARVNGRLARGWGRLSSRTGVGPALVPRIEREALHWMSADHYYDTSRIEALGWRPRHP ISTAAMPETVRALVSDHLLPGSGAGALPAW
Sequences:
>Translated_350_residues MAGVALITGSGGAVADAVAAELARAGWSPRPVALSAEGFGAAGEAPARAVVHLGVRTPRDLPEPARIAVEAGAARAAAEL ARRAGAGRLVHVSTAGVYGRPRNLPCREGELKAPRTAHERVRWAAEQASWAAFRKGAPLTVLRPTVLYGPSLRGGPLRVL ALVALFNQRRRRVPIIRRGPVAHLLHLDDLARAVVHVLDHPDAEAVRGRAFNVADEAPLPLAEHLAAALTALGYEPGRIL PTAPRLTSALLWLVRHVPDRALLARVNGRLARGWGRLSSRTGVGPALVPRIEREALHWMSADHYYDTSRIEALGWRPRHP ISTAAMPETVRALVSDHLLPGSGAGALPAW >Mature_349_residues AGVALITGSGGAVADAVAAELARAGWSPRPVALSAEGFGAAGEAPARAVVHLGVRTPRDLPEPARIAVEAGAARAAAELA RRAGAGRLVHVSTAGVYGRPRNLPCREGELKAPRTAHERVRWAAEQASWAAFRKGAPLTVLRPTVLYGPSLRGGPLRVLA LVALFNQRRRRVPIIRRGPVAHLLHLDDLARAVVHVLDHPDAEAVRGRAFNVADEAPLPLAEHLAAALTALGYEPGRILP TAPRLTSALLWLVRHVPDRALLARVNGRLARGWGRLSSRTGVGPALVPRIEREALHWMSADHYYDTSRIEALGWRPRHPI STAAMPETVRALVSDHLLPGSGAGALPAW
Specific function: Unknown
COG id: COG0451
COG function: function code MG; Nucleoside-diphosphate-sugar epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 37235; Mature: 37104
Theoretical pI: Translated: 11.86; Mature: 11.86
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 0.6 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAGVALITGSGGAVADAVAAELARAGWSPRPVALSAEGFGAAGEAPARAVVHLGVRTPRD CCCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHEEEEECCCCCCC LPEPARIAVEAGAARAAAELARRAGAGRLVHVSTAGVYGRPRNLPCREGELKAPRTAHER CCCHHHEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH VRWAAEQASWAAFRKGAPLTVLRPTVLYGPSLRGGPLRVLALVALFNQRRRRVPIIRRGP HHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCC VAHLLHLDDLARAVVHVLDHPDAEAVRGRAFNVADEAPLPLAEHLAAALTALGYEPGRIL HHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC PTAPRLTSALLWLVRHVPDRALLARVNGRLARGWGRLSSRTGVGPALVPRIEREALHWMS CCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC ADHYYDTSRIEALGWRPRHPISTAAMPETVRALVSDHLLPGSGAGALPAW CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure AGVALITGSGGAVADAVAAELARAGWSPRPVALSAEGFGAAGEAPARAVVHLGVRTPRD CCEEEEECCCCHHHHHHHHHHHHCCCCCCCEEEECCCCCCCCCCCHHEEEEECCCCCCC LPEPARIAVEAGAARAAAELARRAGAGRLVHVSTAGVYGRPRNLPCREGELKAPRTAHER CCCHHHEEEHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCHHHHHH VRWAAEQASWAAFRKGAPLTVLRPTVLYGPSLRGGPLRVLALVALFNQRRRRVPIIRRGP HHHHHHHHHHHHHHCCCCEEEECCCEEECCCCCCCHHHHHHHHHHHHHHHHCCCCEECCC VAHLLHLDDLARAVVHVLDHPDAEAVRGRAFNVADEAPLPLAEHLAAALTALGYEPGRIL HHHHHHHHHHHHHHHHHHCCCCHHHHCCCEECCCCCCCCCHHHHHHHHHHHHCCCCCCCC PTAPRLTSALLWLVRHVPDRALLARVNGRLARGWGRLSSRTGVGPALVPRIEREALHWMS CCCHHHHHHHHHHHHHCCCHHHHHHHCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHC ADHYYDTSRIEALGWRPRHPISTAAMPETVRALVSDHLLPGSGAGALPAW CCCCCCHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA