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The map label for this gene is bphP [H]

Identifier: 220917252

GI number: 220917252

Start: 2389652

End: 2391439

Strand: Reverse

Name: bphP [H]

Synonym: A2cp1_2150

Alternate gene names: 220917252

Gene position: 2391439-2389652 (Counterclockwise)

Preceding gene: 220917253

Following gene: 220917249

Centisome position: 47.55

GC content: 75.17

Gene sequence:

>1788_bases
ATGGAGCGCGCCCGCCGGGAGCTGCGCGAGTCGCGGATGCCCGATCCGCAGCTGCTCGACTCCTTCCCGGCCCTCCTGGA
CGCCCTGGTCGACGCGCTGCGCCACGGGCCCGCGCCGCGCGCGCCGGCCGAGCCGCCGCGGGTGGCGGCGGTCGCGACCG
AGCACGGAGAGCAGCGCGCGGCCATGCCGGTGGACGTGGTGCAGCTCGTCTGGGAGTACGGCGTCGTCAGCGACGTGATC
CTGGAGCTCGCCGAGGAGCAGGGGCTCCGGCCGGAGATCGCCGACCTGCGCGTGCTCGAGGCCGCGCTCAAGGCCGCCAT
CGCCGAGTCGGTGCGCCGGTTCGTCCAGGCGCGCGAGGGCGCCTCCCGGCGCGCGGACGCGCGGCTGCGGGCGGTCGCCG
ATCACGCGCCCGCGGCCCTGGTGCTGCGCGACCGGGAGGGACGGTTCCGGTTCGTGAACCGCTTCGCGGCCGAGGCGCTC
GGGCGACCCCAGGCGGAGCTGCTGGGCCGCCGGTTCGAGGACGTCCTCCCGCCGGCGGTGGCCCGCCGCCTGGCGGGGGC
GGACGCGCGCGCCGGGCGCGGCACCACCGTGGAGCAGCGCGAGACGCTCGACACCCCGCGCGGCCTGAGGACGTTCCACA
CGGTGACGTTCGCGCTCGCGGGCGCGAGCGCGCCCGAGGATCCTGCCATCGTGTCGATCGGCCTCGACGTCACCGACGCC
CAGACCGCGCTGGAGCGCCTGCGGCACGCCGACGAGCTGCTCGAGCTGGGCGACGCGTTCCTGGAGCTGGATCGCGCCTG
GCGGATCGTCCGGGTGAACCGGAACCAGGAGCGGCTCTCGCAGCGCAGCCGGGACACCACGCTGGGCCGGGTGTTCTGGG
AGGTCTGGCCGGAGCTGGCGCGGCCGGAGTCGGCGTACTGGGTCGAGTACCACCGGGTCATGAACGAGCGCGTGCCCAGC
GAGTTCGAGGCGTACTTCGAGCCGCTCGACATGTGGACCGCGGTGGCGGCGTACCCGGTGACCGACGGCGGCGTGGCGGT
GTTCTTCCGCGACGCCACCCGGCGCATGCGCGACGAGCAGCGGCTCCGGCAGGCCCAGGCGTTCGAGCAGCAGCTCATCG
GGATCGTCTCGCACGACCTGCGCAACCCGCTGAACGCGATCCTGCTGGGCGCGTCGTCGCTGCTCGCGCGCGAGGACCTC
TCCGACCGGAACGTCGCGTCGATCGCGCGCATCCGCTCCGCCGCGGAGCGCGCCGCCCGGCTCATCCGCGACCTGCTCGA
CCTCACCCGCGCGCGCCTCGGCGGCGGCATCCCCGTCCAGCCCCGCCCGGCCGACCTGCGCCAGGTGGCCCAGCAGGTGG
TGGACGAGCTGGAGCCGTCGTACCCCGACCGCCCGATCTCGGTGGAGGCCTCGGGCGACACGCACGGACAGTGGGACCCG
GACCGCATCGCGCAGGTGATCGGGAACCTGGTGACGAACGCGCTCAAGTACGGAGCGCGCGGCACGCCGGTCGCGGTCCG
GATCGCCGCCGAGGACGGAGAGGTCCGGCTCTCGGTGCACAACCAGGGCACTCCCATCCCCGCCGAGACCGTCCGGACGA
TCTTCGAGGCGGGCGGCCGGGCCGCGCCGGATCCGACCGGGAGGAGCGTGGGCCTGGGCCTCTTCATCGTGGAGCGCATC
GCCGACGCACACGGAGGCCGCGTGGAGGTCCACTCCTCCGAGGAGGACGGGACCACCTTCACGGTCTGGCTTCCGAGGAA
GCCGCGCGGCGGCAGCGAGCAGGCCTAG

Upstream 100 bases:

>100_bases
CGTCTCCGGCTGCCGCATCCTCCAGCGGACCGTGCCGCGCGCGCCCTCACCCCTTGCCGACCTGATCGAAGCGCGCCGGG
AGGAGCTCGGTCGCCGCTTC

Downstream 100 bases:

>100_bases
ACGTCAGGCGGCCAGCGACGACGCGCGCTCCGCGGCCCGGCGCGAGACGTCGCGCAGCGCGATCCGCTGCGCGAACCCGG
CCGAGCCGACCACCACGCAG

Product: PAS/PAC sensor signal transduction histidine kinase

Products: NA

Alternate protein names: Phytochrome-like protein [H]

Number of amino acids: Translated: 595; Mature: 595

Protein sequence:

>595_residues
MERARRELRESRMPDPQLLDSFPALLDALVDALRHGPAPRAPAEPPRVAAVATEHGEQRAAMPVDVVQLVWEYGVVSDVI
LELAEEQGLRPEIADLRVLEAALKAAIAESVRRFVQAREGASRRADARLRAVADHAPAALVLRDREGRFRFVNRFAAEAL
GRPQAELLGRRFEDVLPPAVARRLAGADARAGRGTTVEQRETLDTPRGLRTFHTVTFALAGASAPEDPAIVSIGLDVTDA
QTALERLRHADELLELGDAFLELDRAWRIVRVNRNQERLSQRSRDTTLGRVFWEVWPELARPESAYWVEYHRVMNERVPS
EFEAYFEPLDMWTAVAAYPVTDGGVAVFFRDATRRMRDEQRLRQAQAFEQQLIGIVSHDLRNPLNAILLGASSLLAREDL
SDRNVASIARIRSAAERAARLIRDLLDLTRARLGGGIPVQPRPADLRQVAQQVVDELEPSYPDRPISVEASGDTHGQWDP
DRIAQVIGNLVTNALKYGARGTPVAVRIAAEDGEVRLSVHNQGTPIPAETVRTIFEAGGRAAPDPTGRSVGLGLFIVERI
ADAHGGRVEVHSSEEDGTTFTVWLPRKPRGGSEQA

Sequences:

>Translated_595_residues
MERARRELRESRMPDPQLLDSFPALLDALVDALRHGPAPRAPAEPPRVAAVATEHGEQRAAMPVDVVQLVWEYGVVSDVI
LELAEEQGLRPEIADLRVLEAALKAAIAESVRRFVQAREGASRRADARLRAVADHAPAALVLRDREGRFRFVNRFAAEAL
GRPQAELLGRRFEDVLPPAVARRLAGADARAGRGTTVEQRETLDTPRGLRTFHTVTFALAGASAPEDPAIVSIGLDVTDA
QTALERLRHADELLELGDAFLELDRAWRIVRVNRNQERLSQRSRDTTLGRVFWEVWPELARPESAYWVEYHRVMNERVPS
EFEAYFEPLDMWTAVAAYPVTDGGVAVFFRDATRRMRDEQRLRQAQAFEQQLIGIVSHDLRNPLNAILLGASSLLAREDL
SDRNVASIARIRSAAERAARLIRDLLDLTRARLGGGIPVQPRPADLRQVAQQVVDELEPSYPDRPISVEASGDTHGQWDP
DRIAQVIGNLVTNALKYGARGTPVAVRIAAEDGEVRLSVHNQGTPIPAETVRTIFEAGGRAAPDPTGRSVGLGLFIVERI
ADAHGGRVEVHSSEEDGTTFTVWLPRKPRGGSEQA
>Mature_595_residues
MERARRELRESRMPDPQLLDSFPALLDALVDALRHGPAPRAPAEPPRVAAVATEHGEQRAAMPVDVVQLVWEYGVVSDVI
LELAEEQGLRPEIADLRVLEAALKAAIAESVRRFVQAREGASRRADARLRAVADHAPAALVLRDREGRFRFVNRFAAEAL
GRPQAELLGRRFEDVLPPAVARRLAGADARAGRGTTVEQRETLDTPRGLRTFHTVTFALAGASAPEDPAIVSIGLDVTDA
QTALERLRHADELLELGDAFLELDRAWRIVRVNRNQERLSQRSRDTTLGRVFWEVWPELARPESAYWVEYHRVMNERVPS
EFEAYFEPLDMWTAVAAYPVTDGGVAVFFRDATRRMRDEQRLRQAQAFEQQLIGIVSHDLRNPLNAILLGASSLLAREDL
SDRNVASIARIRSAAERAARLIRDLLDLTRARLGGGIPVQPRPADLRQVAQQVVDELEPSYPDRPISVEASGDTHGQWDP
DRIAQVIGNLVTNALKYGARGTPVAVRIAAEDGEVRLSVHNQGTPIPAETVRTIFEAGGRAAPDPTGRSVGLGLFIVERI
ADAHGGRVEVHSSEEDGTTFTVWLPRKPRGGSEQA

Specific function: Photoreceptor which exists in two forms that are reversibly interconvertible by light:the R form that absorbs maximally in the red region of the spectrum and the FR form that absorbs maximally in the far-red region [H]

COG id: COG4251

COG function: function code T; Bacteriophytochrome (light-regulated signal transduction histidine kinase)

Gene ontology:

Cell location: Integral Membrane Protein. Inner Membrane [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1790436, Length=254, Percent_Identity=27.5590551181102, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI1786912, Length=235, Percent_Identity=29.3617021276596, Blast_Score=85, Evalue=1e-17,
Organism=Escherichia coli, GI48994928, Length=255, Percent_Identity=29.0196078431373, Blast_Score=84, Evalue=4e-17,
Organism=Escherichia coli, GI1788713, Length=277, Percent_Identity=22.3826714801444, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI145693157, Length=258, Percent_Identity=27.5193798449612, Blast_Score=81, Evalue=2e-16,
Organism=Escherichia coli, GI1786783, Length=217, Percent_Identity=29.0322580645161, Blast_Score=79, Evalue=9e-16,
Organism=Escherichia coli, GI1789149, Length=232, Percent_Identity=26.2931034482759, Blast_Score=79, Evalue=1e-15,
Organism=Escherichia coli, GI1789808, Length=214, Percent_Identity=29.9065420560748, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790346, Length=236, Percent_Identity=27.5423728813559, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI87081816, Length=220, Percent_Identity=30, Blast_Score=69, Evalue=8e-13,
Organism=Escherichia coli, GI1790300, Length=334, Percent_Identity=28.1437125748503, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1788549, Length=263, Percent_Identity=27.7566539923954, Blast_Score=67, Evalue=4e-12,
Organism=Escherichia coli, GI1788393, Length=237, Percent_Identity=26.5822784810127, Blast_Score=64, Evalue=4e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR003018
- InterPro:   IPR013654
- InterPro:   IPR016132
- InterPro:   IPR001294
- InterPro:   IPR013515
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF01590 GAF; PF02518 HATPase_c; PF00512 HisKA; PF08446 PAS_2; PF00360 Phytochrome [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 65742; Mature: 65742

Theoretical pI: Translated: 5.89; Mature: 5.89

Prosite motif: PS50112 PAS ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERARRELRESRMPDPQLLDSFPALLDALVDALRHGPAPRAPAEPPRVAAVATEHGEQRA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCC
AMPVDVVQLVWEYGVVSDVILELAEEQGLRPEIADLRVLEAALKAAIAESVRRFVQAREG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASRRADARLRAVADHAPAALVLRDREGRFRFVNRFAAEALGRPQAELLGRRFEDVLPPAV
CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
ARRLAGADARAGRGTTVEQRETLDTPRGLRTFHTVTFALAGASAPEDPAIVSIGLDVTDA
HHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH
QTALERLRHADELLELGDAFLELDRAWRIVRVNRNQERLSQRSRDTTLGRVFWEVWPELA
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHC
RPESAYWVEYHRVMNERVPSEFEAYFEPLDMWTAVAAYPVTDGGVAVFFRDATRRMRDEQ
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH
RLRQAQAFEQQLIGIVSHDLRNPLNAILLGASSLLAREDLSDRNVASIARIRSAAERAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LIRDLLDLTRARLGGGIPVQPRPADLRQVAQQVVDELEPSYPDRPISVEASGDTHGQWDP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH
DRIAQVIGNLVTNALKYGARGTPVAVRIAAEDGEVRLSVHNQGTPIPAETVRTIFEAGGR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCC
AAPDPTGRSVGLGLFIVERIADAHGGRVEVHSSEEDGTTFTVWLPRKPRGGSEQA
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC
>Mature Secondary Structure
MERARRELRESRMPDPQLLDSFPALLDALVDALRHGPAPRAPAEPPRVAAVATEHGEQRA
CCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEEHHCCCCCC
AMPVDVVQLVWEYGVVSDVILELAEEQGLRPEIADLRVLEAALKAAIAESVRRFVQAREG
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
ASRRADARLRAVADHAPAALVLRDREGRFRFVNRFAAEALGRPQAELLGRRFEDVLPPAV
CCHHHHHHHHHHHCCCCEEEEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHH
ARRLAGADARAGRGTTVEQRETLDTPRGLRTFHTVTFALAGASAPEDPAIVSIGLDVTDA
HHHHCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEECCCCCHH
QTALERLRHADELLELGDAFLELDRAWRIVRVNRNQERLSQRSRDTTLGRVFWEVWPELA
HHHHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCHHHHHHHHCCHHHHHHHHHHHHHHC
RPESAYWVEYHRVMNERVPSEFEAYFEPLDMWTAVAAYPVTDGGVAVFFRDATRRMRDEQ
CCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHH
RLRQAQAFEQQLIGIVSHDLRNPLNAILLGASSLLAREDLSDRNVASIARIRSAAERAAR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
LIRDLLDLTRARLGGGIPVQPRPADLRQVAQQVVDELEPSYPDRPISVEASGDTHGQWDP
HHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCH
DRIAQVIGNLVTNALKYGARGTPVAVRIAAEDGEVRLSVHNQGTPIPAETVRTIFEAGGR
HHHHHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEEECCCCCCCCHHHHHHHHHCCCC
AAPDPTGRSVGLGLFIVERIADAHGGRVEVHSSEEDGTTFTVWLPRKPRGGSEQA
CCCCCCCCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCEEEEEECCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]