| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917239
Identifier: 220917239
GI number: 220917239
Start: 2381614
End: 2383320
Strand: Reverse
Name: 220917239
Synonym: A2cp1_2137
Alternate gene names: NA
Gene position: 2383320-2381614 (Counterclockwise)
Preceding gene: 220917240
Following gene: 220917238
Centisome position: 47.39
GC content: 70.88
Gene sequence:
>1707_bases ATGAGCACCAACATGATCGCCAACGCCCGCCCGGTGTTCGCCGCTGCCGAGACGCACGCCAGCCGCCCGGTGCTCGCGCA GCTCGTCCGCAAGCTCGCGCGATGGGCCGACCACGCCCGGCACTACGACCTCACCTGGACGCCCTGCGACCCGAAGATCG TGGACCTGACCGGCGGGATCCGCCCGCCCGTCAACACGGCGCCGGCGGGTCTGACGGAGGTGGTGATCGGCACGTTCATC GTACCCCCCGCGCAGGCGCCGCTCGCGGCGCTCGCGATCCGCGTGTACGCGACGGTCACCCTTCCGGCGACGGGCGCAGT GGTGCGCCTCCGCTCCGGCTCGGGAAACGTCACGGACCTCGAGTTCAACGCCGACTCCGTGCCCGGCGGGACGGGGTGGG TGTCAGGGTCGCTGCCGATCGGCATGCCGGAGTTCGATACCGTCACGGTCTCGCTGATCCCCCGCCTCGGGTGCGGGATC ACCATCCACTCGCTGAGCGGCTGGTGGGACCCGTCGACGTGGACGAGTGCGCGCTACGCGGACGTGCCCTCGGCCATCCA GCCGATGAGCTCGGCGGCGTTCGCGCCGGGAGAACCGCTCTCGCCGGACGCGCTCAGCGCGATGACGCTGAACTGCAACC TGCTCTCGGCGCGGGCGCCGCGGCCGGTGGTGAACAAGAGCTACACGCCCTGGTACGTCGCAGGCGGGATCAATGACCAG GTCGTCGCGCGCTACCGGATCTGGGTGTCACCCGGGACCGCGATGCTCACCGTGAAGACCCTCGTGAAGCACGTCGGCGC GGCGGCCACGGTGGTGGCGGAGCTCTACACGGCCGGCGAGACGTTCCTCGCTCTCGAGGCGCAAGCGAGCCCGAGCGCAT ACGGATGGCTCACGTACACCCTCCCGATCAACCACTCCGCGCGGCTCGGCGGGTTCGAGGTGGAGCTCCGGATCAGGGTG TACCAGCCGCCAGGCGACAACGGCTTCTTCCTCGCCTCCGTTTCGTGCTGGGAGCAGTACCCGTCGCACGTCGAGATGGG GATGCCCGCAGGCGAGACGTACGGCGACGCGTTCAACCCGCCCGCGCTGCCGGGCCCGATCGTCTCGCGCAACGTGATCA GGGCCCAGGACCTCCTGCAGTGCTGGCAGGGCATCCTGTGGGCGTACCGCTACCGCCGGCGCCAGACGGTCTGCGACTGC CTGCACACCGGGATCGGTCCGGGTGGCTGGGCCGCACCCGACGCCGATTACCTCGGGCCCGACGTCTACACCGGCCCGCT CACGCCGCGAGGCGATGACCTCGCGGTGGCGGGGCTGCGGATGGTGCGGCGGCTCCCGACCGGCGATGGCGCGTACGACC CGGTCACGTCCTCGAGGCAATGGGCGTTCGAGCGGATGGTGGAGTTCGCGGCCATCACCAGGTTCCAGCCGTACGCGGTG ACGAACCCGCCGCAGGACTGGCGGATGGGCACCGTCGGCTTCGTGCACTGGGCGGGCGTGTCGTGGTTCGCCCGCCCGGA GAAGGACGCGCCCAGCGTGCGCTTCGAGTCGCAGCTCGTCTCGTACCCGACGAACCTGCCCGAGCGCTACGAGGAGCAGG AAGAGATGCCGGTGCGCCACCAGCTCGAGTCCGCGAGCACGTACCAGGGTTCGCCCATCGGCGTTCTCGACCTCGGCTGC TCGTTCGCCGGCCGCTTCGCGCGCTGA
Upstream 100 bases:
>100_bases CGATCGCGGCCGCGGCCGGGACCGTCGAGGCGCAGGTCGGGGACGTCGTCGTTCGGAGGGCGTCGGCAGCGGTGGCCGCC GCAGGAAGGGGCGTCGCACG
Downstream 100 bases:
>100_bases CGCAGTCAGACAACCTGCAGCACCAACCCGCCCGCGAGGGCACGAAAGGAAGGATCGGATGAGCACGTCGAAGTACCAGG TCACCGCGGAAGAGGTGCAG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 568; Mature: 567
Protein sequence:
>568_residues MSTNMIANARPVFAAAETHASRPVLAQLVRKLARWADHARHYDLTWTPCDPKIVDLTGGIRPPVNTAPAGLTEVVIGTFI VPPAQAPLAALAIRVYATVTLPATGAVVRLRSGSGNVTDLEFNADSVPGGTGWVSGSLPIGMPEFDTVTVSLIPRLGCGI TIHSLSGWWDPSTWTSARYADVPSAIQPMSSAAFAPGEPLSPDALSAMTLNCNLLSARAPRPVVNKSYTPWYVAGGINDQ VVARYRIWVSPGTAMLTVKTLVKHVGAAATVVAELYTAGETFLALEAQASPSAYGWLTYTLPINHSARLGGFEVELRIRV YQPPGDNGFFLASVSCWEQYPSHVEMGMPAGETYGDAFNPPALPGPIVSRNVIRAQDLLQCWQGILWAYRYRRRQTVCDC LHTGIGPGGWAAPDADYLGPDVYTGPLTPRGDDLAVAGLRMVRRLPTGDGAYDPVTSSRQWAFERMVEFAAITRFQPYAV TNPPQDWRMGTVGFVHWAGVSWFARPEKDAPSVRFESQLVSYPTNLPERYEEQEEMPVRHQLESASTYQGSPIGVLDLGC SFAGRFAR
Sequences:
>Translated_568_residues MSTNMIANARPVFAAAETHASRPVLAQLVRKLARWADHARHYDLTWTPCDPKIVDLTGGIRPPVNTAPAGLTEVVIGTFI VPPAQAPLAALAIRVYATVTLPATGAVVRLRSGSGNVTDLEFNADSVPGGTGWVSGSLPIGMPEFDTVTVSLIPRLGCGI TIHSLSGWWDPSTWTSARYADVPSAIQPMSSAAFAPGEPLSPDALSAMTLNCNLLSARAPRPVVNKSYTPWYVAGGINDQ VVARYRIWVSPGTAMLTVKTLVKHVGAAATVVAELYTAGETFLALEAQASPSAYGWLTYTLPINHSARLGGFEVELRIRV YQPPGDNGFFLASVSCWEQYPSHVEMGMPAGETYGDAFNPPALPGPIVSRNVIRAQDLLQCWQGILWAYRYRRRQTVCDC LHTGIGPGGWAAPDADYLGPDVYTGPLTPRGDDLAVAGLRMVRRLPTGDGAYDPVTSSRQWAFERMVEFAAITRFQPYAV TNPPQDWRMGTVGFVHWAGVSWFARPEKDAPSVRFESQLVSYPTNLPERYEEQEEMPVRHQLESASTYQGSPIGVLDLGC SFAGRFAR >Mature_567_residues STNMIANARPVFAAAETHASRPVLAQLVRKLARWADHARHYDLTWTPCDPKIVDLTGGIRPPVNTAPAGLTEVVIGTFIV PPAQAPLAALAIRVYATVTLPATGAVVRLRSGSGNVTDLEFNADSVPGGTGWVSGSLPIGMPEFDTVTVSLIPRLGCGIT IHSLSGWWDPSTWTSARYADVPSAIQPMSSAAFAPGEPLSPDALSAMTLNCNLLSARAPRPVVNKSYTPWYVAGGINDQV VARYRIWVSPGTAMLTVKTLVKHVGAAATVVAELYTAGETFLALEAQASPSAYGWLTYTLPINHSARLGGFEVELRIRVY QPPGDNGFFLASVSCWEQYPSHVEMGMPAGETYGDAFNPPALPGPIVSRNVIRAQDLLQCWQGILWAYRYRRRQTVCDCL HTGIGPGGWAAPDADYLGPDVYTGPLTPRGDDLAVAGLRMVRRLPTGDGAYDPVTSSRQWAFERMVEFAAITRFQPYAVT NPPQDWRMGTVGFVHWAGVSWFARPEKDAPSVRFESQLVSYPTNLPERYEEQEEMPVRHQLESASTYQGSPIGVLDLGCS FAGRFAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61574; Mature: 61443
Theoretical pI: Translated: 6.67; Mature: 6.67
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTNMIANARPVFAAAETHASRPVLAQLVRKLARWADHARHYDLTWTPCDPKIVDLTGGI CCCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCC RPPVNTAPAGLTEVVIGTFIVPPAQAPLAALAIRVYATVTLPATGAVVRLRSGSGNVTDL CCCCCCCCCCHHHHHHHHEECCCCCCHHHHHEEEEEEEEEECCCCEEEEEECCCCCEEEE EFNADSVPGGTGWVSGSLPIGMPEFDTVTVSLIPRLGCGITIHSLSGWWDPSTWTSARYA EECCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC DVPSAIQPMSSAAFAPGEPLSPDALSAMTLNCNLLSARAPRPVVNKSYTPWYVAGGINDQ CCCHHHHHHHHCCCCCCCCCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCC VVARYRIWVSPGTAMLTVKTLVKHVGAAATVVAELYTAGETFLALEAQASPSAYGWLTYT EEEEEEEEECCCCCEEEHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEE LPINHSARLGGFEVELRIRVYQPPGDNGFFLASVSCWEQYPSHVEMGMPAGETYGDAFNP EECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEHHHHHCCCCEECCCCCCCCCCCCCCC PALPGPIVSRNVIRAQDLLQCWQGILWAYRYRRRQTVCDCLHTGIGPGGWAAPDADYLGP CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DVYTGPLTPRGDDLAVAGLRMVRRLPTGDGAYDPVTSSRQWAFERMVEFAAITRFQPYAV CCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE TNPPQDWRMGTVGFVHWAGVSWFARPEKDAPSVRFESQLVSYPTNLPERYEEQEEMPVRH CCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCEEHHHHHHCCCCCHHHHHHHHCCCHHH QLESASTYQGSPIGVLDLGCSFAGRFAR HHHCCCCCCCCCCEEEECCCCCCCCCCC >Mature Secondary Structure STNMIANARPVFAAAETHASRPVLAQLVRKLARWADHARHYDLTWTPCDPKIVDLTGGI CCCCCCCCCCEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCCEEECCCCCEEEEECCCC RPPVNTAPAGLTEVVIGTFIVPPAQAPLAALAIRVYATVTLPATGAVVRLRSGSGNVTDL CCCCCCCCCCHHHHHHHHEECCCCCCHHHHHEEEEEEEEEECCCCEEEEEECCCCCEEEE EFNADSVPGGTGWVSGSLPIGMPEFDTVTVSLIPRLGCGITIHSLSGWWDPSTWTSARYA EECCCCCCCCCCEECCCCCCCCCCCCEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCC DVPSAIQPMSSAAFAPGEPLSPDALSAMTLNCNLLSARAPRPVVNKSYTPWYVAGGINDQ CCCHHHHHHHHCCCCCCCCCCCCHHEEEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCC VVARYRIWVSPGTAMLTVKTLVKHVGAAATVVAELYTAGETFLALEAQASPSAYGWLTYT EEEEEEEEECCCCCEEEHHHHHHHHCHHHHHHHHHHHCCCEEEEEEECCCCCCEEEEEEE LPINHSARLGGFEVELRIRVYQPPGDNGFFLASVSCWEQYPSHVEMGMPAGETYGDAFNP EECCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEHHHHHCCCCEECCCCCCCCCCCCCCC PALPGPIVSRNVIRAQDLLQCWQGILWAYRYRRRQTVCDCLHTGIGPGGWAAPDADYLGP CCCCCCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC DVYTGPLTPRGDDLAVAGLRMVRRLPTGDGAYDPVTSSRQWAFERMVEFAAITRFQPYAV CCEECCCCCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCEEE TNPPQDWRMGTVGFVHWAGVSWFARPEKDAPSVRFESQLVSYPTNLPERYEEQEEMPVRH CCCCCCCCCCCEEEEEECCCEEECCCCCCCCCCEEHHHHHHCCCCCHHHHHHHHCCCHHH QLESASTYQGSPIGVLDLGCSFAGRFAR HHHCCCCCCCCCCEEEECCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA