| Definition | Anaeromyxobacter dehalogenans 2CP-1 chromosome, complete genome. |
|---|---|
| Accession | NC_011891 |
| Length | 5,029,329 |
Click here to switch to the map view.
The map label for this gene is 220917233
Identifier: 220917233
GI number: 220917233
Start: 2378783
End: 2379298
Strand: Reverse
Name: 220917233
Synonym: A2cp1_2131
Alternate gene names: NA
Gene position: 2379298-2378783 (Counterclockwise)
Preceding gene: 220917234
Following gene: 220917232
Centisome position: 47.31
GC content: 77.33
Gene sequence:
>516_bases ATGACCGCCACCGCCGACCCGCGCTGCACCTGCGGCCAGGCCGAGCACCGGCAGACCTGCCGCGTCGAGATCGAGCGCGC GCAGCTCGCGGCCGCGATGCTGCAGAGCGCGATCCGGCGCATCCGGGAGAAGCACACCGGGCGCCGCGCGTGGTCGGGCG CCGGCGACGCGCTGGGGTGGTACTTCCGCCAGCTCCGCCGCCGCTCGACGCCGCGCCCGGCCCGTCTCGAGCCGGCGAAC GGGAGGATCGGCGACGACCCCGTGCGGCGCGCCGTCGGCGACGAGCAGTTCGCGGCGGTCGCGTTCGCGGTCGGGGAGGC CGAGCGGGACGCGCGCTCGAGAGGCGAGGCCGCGCCGGTCGCCCGCTGGCTGGCCGAGCACTACGCGCTGGGCCGGGCGT ACGCGTGGATCGCGGAGGAGGCGGGGCGCGAGGAGGCGGACGTGCGGCGGGTAATGAGCCGAGTCCACCGGGTGATCCGC GAGCGTCTCGAGGACGGCGGGTGGCTCGACGAGTAG
Upstream 100 bases:
>100_bases TCGAGGAGCGCCTCCCCGAAGGAAGCGCGGCGAGGGCCGAGGCCGCGCGGTTCGAGGGGTTCGCGGAGTACGTCGCGCGG CTGGCGCGGAGGGCCCGGAT
Downstream 100 bases:
>100_bases CGCTTGGGCGTGACCCCGGCAGGGAGGACTTGCAGTCTAAGTTAATATCCGGCTATCTTGCGCTACACGGGTTGCAGAGA AGGTACCTGCGGCCGGACGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 171; Mature: 170
Protein sequence:
>171_residues MTATADPRCTCGQAEHRQTCRVEIERAQLAAAMLQSAIRRIREKHTGRRAWSGAGDALGWYFRQLRRRSTPRPARLEPAN GRIGDDPVRRAVGDEQFAAVAFAVGEAERDARSRGEAAPVARWLAEHYALGRAYAWIAEEAGREEADVRRVMSRVHRVIR ERLEDGGWLDE
Sequences:
>Translated_171_residues MTATADPRCTCGQAEHRQTCRVEIERAQLAAAMLQSAIRRIREKHTGRRAWSGAGDALGWYFRQLRRRSTPRPARLEPAN GRIGDDPVRRAVGDEQFAAVAFAVGEAERDARSRGEAAPVARWLAEHYALGRAYAWIAEEAGREEADVRRVMSRVHRVIR ERLEDGGWLDE >Mature_170_residues TATADPRCTCGQAEHRQTCRVEIERAQLAAAMLQSAIRRIREKHTGRRAWSGAGDALGWYFRQLRRRSTPRPARLEPANG RIGDDPVRRAVGDEQFAAVAFAVGEAERDARSRGEAAPVARWLAEHYALGRAYAWIAEEAGREEADVRRVMSRVHRVIRE RLEDGGWLDE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19304; Mature: 19173
Theoretical pI: Translated: 9.82; Mature: 9.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.5 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTATADPRCTCGQAEHRQTCRVEIERAQLAAAMLQSAIRRIREKHTGRRAWSGAGDALGW CCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH YFRQLRRRSTPRPARLEPANGRIGDDPVRRAVGDEQFAAVAFAVGEAERDARSRGEAAPV HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH ARWLAEHYALGRAYAWIAEEAGREEADVRRVMSRVHRVIRERLEDGGWLDE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC >Mature Secondary Structure TATADPRCTCGQAEHRQTCRVEIERAQLAAAMLQSAIRRIREKHTGRRAWSGAGDALGW CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHCCCCHHHHH YFRQLRRRSTPRPARLEPANGRIGDDPVRRAVGDEQFAAVAFAVGEAERDARSRGEAAPV HHHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHHH ARWLAEHYALGRAYAWIAEEAGREEADVRRVMSRVHRVIRERLEDGGWLDE HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA